RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 MAGEA5P43359 124 aa9.24□□□□□ -0.93
CCDC40-203ENST00000374877 GABRA2P47869 451 aa9.24□□□□□ -0.93
CCDC40-203ENST00000374877 VWC2Q2TAL6 325 aa9.24□□□□□ -0.93
CCDC40-203ENST00000374877 PDLIM3Q53GG5 364 aaPredicted RBP9.24□□□□□ -0.93
CCDC40-203ENST00000374877 MDP1Q86V88 176 aa9.24□□□□□ -0.93
CCDC40-203ENST00000374877 BAGE3Q86Y29 109 aa9.24□□□□□ -0.93
CCDC40-203ENST00000374877 BAGE2Q86Y30 109 aa9.24□□□□□ -0.93
CCDC40-203ENST00000374877 ZBTB34Q8NCN2 500 aa9.24□□□□□ -0.93
CCDC40-203ENST00000374877 QTRT1Q9BXR0 403 aaKnown RBP9.24□□□□□ -0.93
CCDC40-203ENST00000374877 WDR83OSQ9Y284 106 aa9.24□□□□□ -0.93
CCDC40-203ENST00000374877 M0QZK8 103 aa9.24□□□□□ -0.93
CCDC40-203ENST00000374877 SLC17A3O00476 420 aa9.24□□□□□ -0.93
CCDC40-203ENST00000374877 DLEU1O43261 78 aa9.24□□□□□ -0.93
CCDC40-203ENST00000374877 NPSP0C0P6 89 aa9.24□□□□□ -0.93
CCDC40-203ENST00000374877 CDKN1AP38936 164 aa9.24□□□□□ -0.93
CCDC40-203ENST00000374877 LTC4SQ16873 150 aa9.24□□□□□ -0.93
CCDC40-203ENST00000374877 TPRX1Q8N7U7 411 aa9.24□□□□□ -0.93
CCDC40-203ENST00000374877 RFESDQ8TAC1 157 aa9.24□□□□□ -0.93
CCDC40-203ENST00000374877 OCC1Q8TAD7 63 aa9.24□□□□□ -0.93
CCDC40-203ENST00000374877 RBM14Q96PK6 669 aaKnown RBP9.24□□□□□ -0.93
CCDC40-203ENST00000374877 OR2J1Q9GZK6 312 aa9.24□□□□□ -0.93
CCDC40-203ENST00000374877 MSL2Q9HCI7 577 aa9.24□□□□□ -0.93
CCDC40-203ENST00000374877 MARCH11A6NNE9 402 aa9.23□□□□□ -0.93
CCDC40-203ENST00000374877 UBE2NP61088 152 aaKnown RBP9.23□□□□□ -0.93
CCDC40-203ENST00000374877 PLGLB1Q02325 96 aa9.23□□□□□ -0.93
CCDC40-203ENST00000374877 ALKBH6Q3KRA9 238 aa9.23□□□□□ -0.93
CCDC40-203ENST00000374877 TMEM251Q8N6I4 163 aa9.23□□□□□ -0.93
CCDC40-203ENST00000374877 Q8N7P7 452 aa9.23□□□□□ -0.93
CCDC40-203ENST00000374877 PLPPR2Q96GM1 343 aa9.23□□□□□ -0.93
CCDC40-203ENST00000374877 VAMP8Q9BV40 100 aa9.23□□□□□ -0.93
CCDC40-203ENST00000374877 MRPL18Q9H0U6 180 aaKnown RBP9.23□□□□□ -0.93
CCDC40-203ENST00000374877 CEP250Q9BV73 2442 aa9.23□□□□□ -0.93
CCDC40-203ENST00000374877 TRAV17A0A0B4J275 112 aa9.23□□□□□ -0.93
CCDC40-203ENST00000374877 LINC00473A8K010 186 aa9.23□□□□□ -0.93
CCDC40-203ENST00000374877 TIMP3P35625 211 aa9.23□□□□□ -0.93
CCDC40-203ENST00000374877 ERVK11-1P61568 191 aa9.23□□□□□ -0.93
CCDC40-203ENST00000374877 IGFL3Q6UXB1 125 aa9.23□□□□□ -0.93
CCDC40-203ENST00000374877 TP53TG3Q9ULZ0 132 aa9.23□□□□□ -0.93
CCDC40-203ENST00000374877 WNT9BO14905 357 aa9.23□□□□□ -0.93
CCDC40-203ENST00000374877 TGFBR3Q03167 851 aa9.23□□□□□ -0.93
CCDC40-203ENST00000374877 ZNF146Q15072 292 aa9.23□□□□□ -0.93
CCDC40-203ENST00000374877 TMEM183BQ1AE95 376 aa9.23□□□□□ -0.93
CCDC40-203ENST00000374877 TPTE2P1Q5T6R2 138 aa9.23□□□□□ -0.93
CCDC40-203ENST00000374877 MIC13Q5XKP0 118 aa9.23□□□□□ -0.93
CCDC40-203ENST00000374877 TAAR6Q96RI8 345 aa9.23□□□□□ -0.93
CCDC40-203ENST00000374877 MIEN1Q9BRT3 115 aa9.23□□□□□ -0.93
CCDC40-203ENST00000374877 FAM234AQ9H0X4 552 aa9.23□□□□□ -0.93
CCDC40-203ENST00000374877 PSG11Q9UQ72 335 aa9.23□□□□□ -0.93
CCDC40-203ENST00000374877 CNOT1A5YKK6 2376 aaKnown RBP9.23□□□□□ -0.93
CCDC40-203ENST00000374877 FCN1O00602 326 aa9.22□□□□□ -0.93
CCDC40-203ENST00000374877 TNFSF13O75888 250 aa9.22□□□□□ -0.93
CCDC40-203ENST00000374877 SSTR5P35346 364 aa9.22□□□□□ -0.93
CCDC40-203ENST00000374877 YPEL3P61236 119 aaPredicted RBP9.22□□□□□ -0.93
CCDC40-203ENST00000374877 PAFAH1B2P68402 229 aa9.22□□□□□ -0.93
CCDC40-203ENST00000374877 ZNF826PQ6ZT77 177 aa9.22□□□□□ -0.93
CCDC40-203ENST00000374877 OR5AU1Q8NGC0 362 aa9.22□□□□□ -0.93
CCDC40-203ENST00000374877 DIRC2Q96SL1 478 aa9.22□□□□□ -0.93
CCDC40-203ENST00000374877 FAM103A1Q9BTL3 118 aaKnown RBP9.22□□□□□ -0.93
CCDC40-203ENST00000374877 F2Z2F3 143 aa9.22□□□□□ -0.93
CCDC40-203ENST00000374877 CELA3BP08861 270 aa9.22□□□□□ -0.93
CCDC40-203ENST00000374877 IER3P46695 156 aa9.22□□□□□ -0.93
CCDC40-203ENST00000374877 HLA-DRB5Q30154 266 aa9.22□□□□□ -0.93
CCDC40-203ENST00000374877 SSMEM1Q8WWF3 244 aa9.22□□□□□ -0.93
CCDC40-203ENST00000374877 HEYLQ9NQ87 328 aaPredicted RBP9.22□□□□□ -0.93
CCDC40-203ENST00000374877 OOEPA6NGQ2 149 aa9.22□□□□□ -0.93
CCDC40-203ENST00000374877 AQP7O14520 342 aa9.22□□□□□ -0.93
CCDC40-203ENST00000374877 OR9G9P0C7N8 305 aa9.22□□□□□ -0.93
CCDC40-203ENST00000374877 LINC00310P59036 64 aa9.22□□□□□ -0.93
CCDC40-203ENST00000374877 OR1L6Q8NGR2 347 aa9.22□□□□□ -0.93
CCDC40-203ENST00000374877 RAB1CQ92928 201 aa9.22□□□□□ -0.93
CCDC40-203ENST00000374877 RRHO14718 337 aa9.21□□□□□ -0.93
CCDC40-203ENST00000374877 RANP62826 216 aaKnown RBP9.21□□□□□ -0.93
CCDC40-203ENST00000374877 TBC1D28Q2M2D7 210 aa9.21□□□□□ -0.93
CCDC40-203ENST00000374877 PRAMEF5Q5TYX0 476 aa9.21□□□□□ -0.93
CCDC40-203ENST00000374877 PRAMEF6Q5VXH4 476 aa9.21□□□□□ -0.93
CCDC40-203ENST00000374877 TEX43Q6ZNM6 134 aa9.21□□□□□ -0.93
CCDC40-203ENST00000374877 SPACA3Q8IXA5 215 aa9.21□□□□□ -0.93
CCDC40-203ENST00000374877 C20orf144Q9BQM9 153 aa9.21□□□□□ -0.93
CCDC40-203ENST00000374877 DCAF16Q9NXF7 216 aa9.21□□□□□ -0.93
CCDC40-203ENST00000374877 SNURFLB1AK76 121 aa9.21□□□□□ -0.94
CCDC40-203ENST00000374877 SPINK4O60575 86 aa9.21□□□□□ -0.94
CCDC40-203ENST00000374877 YPEL1O60688 119 aa9.21□□□□□ -0.94
CCDC40-203ENST00000374877 FCGR3BO75015 233 aa9.21□□□□□ -0.94
CCDC40-203ENST00000374877 FRMD6-AS1P0C7T7 363 aa9.21□□□□□ -0.94
CCDC40-203ENST00000374877 COL8A2P25067 703 aa9.21□□□□□ -0.94
CCDC40-203ENST00000374877 KRTDAPP60985 99 aa9.21□□□□□ -0.94
CCDC40-203ENST00000374877 RPL31P62899 125 aaKnown RBP9.21□□□□□ -0.94
CCDC40-203ENST00000374877 EIF4EBP1Q13541 118 aaPredicted RBP9.21□□□□□ -0.94
CCDC40-203ENST00000374877 TREML4Q6UXN2 200 aa9.21□□□□□ -0.94
CCDC40-203ENST00000374877 ZADH2Q8N4Q0 377 aa9.21□□□□□ -0.94
CCDC40-203ENST00000374877 NANOS1Q8WY41 292 aaKnown RBP9.21□□□□□ -0.94
CCDC40-203ENST00000374877 YPEL2Q96QA6 119 aa9.21□□□□□ -0.94
CCDC40-203ENST00000374877 OBP2BQ9NPH6 170 aa9.21□□□□□ -0.94
CCDC40-203ENST00000374877 YTHDF2Q9Y5A9 579 aaKnown RBP9.21□□□□□ -0.94
CCDC40-203ENST00000374877 CXorf1O96002 111 aa9.21□□□□□ -0.94
CCDC40-203ENST00000374877 SELENOTP62341 195 aa9.21□□□□□ -0.94
CCDC40-203ENST00000374877 KRTCAP3Q53RY4 240 aa9.21□□□□□ -0.94
CCDC40-203ENST00000374877 ARSJQ5FYB0 599 aaPredicted RBP9.21□□□□□ -0.94
CCDC40-203ENST00000374877 VKORC1L1Q8N0U8 176 aa9.21□□□□□ -0.94
CCDC40-203ENST00000374877 MS4A5Q9H3V2 200 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms