RNA–Protein interactions for RNA: ENST00000374490.7

HMGCL-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCL, Length 1,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-203ENST00000374490 FAM222BQ8WU58 562 aa11.54□□□□□ -0.56
HMGCL-203ENST00000374490 ANAPC16Q96DE5 110 aa11.54□□□□□ -0.56
HMGCL-203ENST00000374490 OR5B12Q96R08 314 aa11.54□□□□□ -0.56
HMGCL-203ENST00000374490 OR2V2Q96R30 315 aa11.54□□□□□ -0.56
HMGCL-203ENST00000374490 DCTN5Q9BTE1 182 aa11.54□□□□□ -0.56
HMGCL-203ENST00000374490 CALYQ9NYX4 217 aa11.54□□□□□ -0.56
HMGCL-203ENST00000374490 GTF3C1Q12789 2109 aa11.54□□□□□ -0.56
HMGCL-203ENST00000374490 PPP1R2P9O14990 202 aa11.53□□□□□ -0.56
HMGCL-203ENST00000374490 HIST1H2BKO60814 126 aa11.53□□□□□ -0.56
HMGCL-203ENST00000374490 LHBP01229 141 aa11.53□□□□□ -0.56
HMGCL-203ENST00000374490 HIST1H2BJP06899 126 aa11.53□□□□□ -0.56
HMGCL-203ENST00000374490 HIST1H2BOP23527 126 aa11.53□□□□□ -0.56
HMGCL-203ENST00000374490 HIST1H2BBP33778 126 aa11.53□□□□□ -0.56
HMGCL-203ENST00000374490 TIMP3P35625 211 aa11.53□□□□□ -0.56
HMGCL-203ENST00000374490 OPRK1P41145 380 aa11.53□□□□□ -0.56
HMGCL-203ENST00000374490 VDAC2P45880 294 aaPredicted RBP11.53□□□□□ -0.56
HMGCL-203ENST00000374490 THBS3P49746 956 aa11.53□□□□□ -0.56
HMGCL-203ENST00000374490 LOXL3P58215 753 aa11.53□□□□□ -0.56
HMGCL-203ENST00000374490 HIST1H2BDP58876 126 aa11.53□□□□□ -0.56
HMGCL-203ENST00000374490 HIST1H2BCP62807 126 aa11.53□□□□□ -0.56
HMGCL-203ENST00000374490 HIST2H2BEQ16778 126 aa11.53□□□□□ -0.56
HMGCL-203ENST00000374490 LTC4SQ16873 150 aa11.53□□□□□ -0.56
HMGCL-203ENST00000374490 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.53□□□□□ -0.56
HMGCL-203ENST00000374490 MOGAT3Q86VF5 341 aa11.53□□□□□ -0.56
HMGCL-203ENST00000374490 HIST1H2BHQ93079 126 aa11.53□□□□□ -0.56
HMGCL-203ENST00000374490 HIST1H2BNQ99877 126 aa11.53□□□□□ -0.56
HMGCL-203ENST00000374490 HIST1H2BMQ99879 126 aa11.53□□□□□ -0.56
HMGCL-203ENST00000374490 PYGO2Q9BRQ0 406 aa11.53□□□□□ -0.56
HMGCL-203ENST00000374490 SFXN3Q9BWM7 321 aa11.53□□□□□ -0.56
HMGCL-203ENST00000374490 IFI27L2Q9H2X8 130 aa11.53□□□□□ -0.56
HMGCL-203ENST00000374490 SRD5A3Q9H8P0 318 aa11.53□□□□□ -0.56
HMGCL-203ENST00000374490 GAR1Q9NY12 217 aaKnown RBP11.53□□□□□ -0.56
HMGCL-203ENST00000374490 PTPN13Q12923 2485 aa11.53□□□□□ -0.56
HMGCL-203ENST00000374490 SVILO95425 2214 aa11.53□□□□□ -0.56
HMGCL-203ENST00000374490 F6UZH7 168 aa11.53□□□□□ -0.56
HMGCL-203ENST00000374490 H7BYZ3 331 aa11.53□□□□□ -0.56
HMGCL-203ENST00000374490 PDE6DO43924 150 aa11.53□□□□□ -0.56
HMGCL-203ENST00000374490 IFNA10P01566 189 aa11.53□□□□□ -0.56
HMGCL-203ENST00000374490 TRGC2P03986 189 aa11.53□□□□□ -0.56
HMGCL-203ENST00000374490 CGB3P0DN86 165 aa11.53□□□□□ -0.56
HMGCL-203ENST00000374490 CGB7P0DN87 165 aa11.53□□□□□ -0.56
HMGCL-203ENST00000374490 RPL23P62829 140 aaKnown RBP11.53□□□□□ -0.56
HMGCL-203ENST00000374490 MSMPQ1L6U9 139 aa11.53□□□□□ -0.56
HMGCL-203ENST00000374490 C4orf17Q53FE4 359 aa11.53□□□□□ -0.56
HMGCL-203ENST00000374490 DNLZQ5SXM8 178 aa11.53□□□□□ -0.56
HMGCL-203ENST00000374490 OR4F5Q8NH21 305 aa11.53□□□□□ -0.56
HMGCL-203ENST00000374490 FAM57AQ8TBR7 257 aa11.53□□□□□ -0.56
HMGCL-203ENST00000374490 RPUSD4Q96CM3 377 aaKnown RBP11.53□□□□□ -0.56
HMGCL-203ENST00000374490 BTF3L4Q96K17 158 aa11.53□□□□□ -0.56
HMGCL-203ENST00000374490 PSMG3-AS1Q96PY0 264 aa11.53□□□□□ -0.56
HMGCL-203ENST00000374490 OR4F4Q96R69 305 aa11.53□□□□□ -0.56
HMGCL-203ENST00000374490 FAM234AQ9H0X4 552 aa11.53□□□□□ -0.56
HMGCL-203ENST00000374490 PARLQ9H300 379 aa11.53□□□□□ -0.56
HMGCL-203ENST00000374490 HEYLQ9NQ87 328 aaPredicted RBP11.53□□□□□ -0.56
HMGCL-203ENST00000374490 GFOD1Q9NXC2 390 aa11.53□□□□□ -0.56
HMGCL-203ENST00000374490 A0A1W2PPV4 95 aa11.52□□□□□ -0.57
HMGCL-203ENST00000374490 PROP1O75360 226 aa11.52□□□□□ -0.57
HMGCL-203ENST00000374490 EDDM3BP56851 147 aa11.52□□□□□ -0.57
HMGCL-203ENST00000374490 HOXA4Q00056 320 aaPredicted RBP11.52□□□□□ -0.57
HMGCL-203ENST00000374490 RELBQ01201 579 aa11.52□□□□□ -0.57
HMGCL-203ENST00000374490 ZNF474Q6S9Z5 364 aaPredicted RBP11.52□□□□□ -0.57
HMGCL-203ENST00000374490 C16orf82Q7Z2V1 217 aa11.52□□□□□ -0.57
HMGCL-203ENST00000374490 LRP11Q86VZ4 500 aa11.52□□□□□ -0.57
HMGCL-203ENST00000374490 LURAP1LQ8IV03 231 aa11.52□□□□□ -0.57
HMGCL-203ENST00000374490 CISD2Q8N5K1 135 aaKnown RBP11.52□□□□□ -0.57
HMGCL-203ENST00000374490 OR10A7Q8NGE5 316 aa11.52□□□□□ -0.57
HMGCL-203ENST00000374490 ITLN1Q8WWA0 313 aa11.52□□□□□ -0.57
HMGCL-203ENST00000374490 DDB2Q92466 427 aa11.52□□□□□ -0.57
HMGCL-203ENST00000374490 SDSLQ96GA7 329 aa11.52□□□□□ -0.57
HMGCL-203ENST00000374490 TMEM140Q9NV12 185 aa11.52□□□□□ -0.57
HMGCL-203ENST00000374490 RNF7Q9UBF6 113 aa11.52□□□□□ -0.57
HMGCL-203ENST00000374490 FAM215AQ9Y5M1 114 aa11.52□□□□□ -0.57
HMGCL-203ENST00000374490 IGHV3OR15-7A0A075B7D8 119 aa11.51□□□□□ -0.57
HMGCL-203ENST00000374490 TRGV10A0A0A0MS01 117 aa11.51□□□□□ -0.57
HMGCL-203ENST00000374490 PRRG2O14669 202 aa11.51□□□□□ -0.57
HMGCL-203ENST00000374490 YIF1AO95070 293 aa11.51□□□□□ -0.57
HMGCL-203ENST00000374490 PFN1P07737 140 aaKnown RBP11.51□□□□□ -0.57
HMGCL-203ENST00000374490 TNFSF4P23510 183 aa11.51□□□□□ -0.57
HMGCL-203ENST00000374490 SPINK9Q5DT21 86 aa11.51□□□□□ -0.57
HMGCL-203ENST00000374490 Q8NA96 180 aa11.51□□□□□ -0.57
HMGCL-203ENST00000374490 GSN-AS1Q9NRJ2 163 aa11.51□□□□□ -0.57
HMGCL-203ENST00000374490 KBTBD11-OT1A0A1B0GTJ5 212 aa11.5□□□□□ -0.57
HMGCL-203ENST00000374490 ZNF729A6NN14 1252 aaPredicted RBP11.5□□□□□ -0.57
HMGCL-203ENST00000374490 SPRY3O43610 288 aa11.5□□□□□ -0.57
HMGCL-203ENST00000374490 PAGE4O60829 102 aa11.5□□□□□ -0.57
HMGCL-203ENST00000374490 HRASP01112 189 aa11.5□□□□□ -0.57
HMGCL-203ENST00000374490 GYPAP02724 150 aa11.5□□□□□ -0.57
HMGCL-203ENST00000374490 TRGC1P0CF51 173 aa11.5□□□□□ -0.57
HMGCL-203ENST00000374490 CD99P14209 185 aa11.5□□□□□ -0.57
HMGCL-203ENST00000374490 SRP14P37108 136 aaKnown RBP11.5□□□□□ -0.57
HMGCL-203ENST00000374490 TDGF1P3P51864 188 aa11.5□□□□□ -0.57
HMGCL-203ENST00000374490 RPL39P5Q59GN2 51 aa11.5□□□□□ -0.57
HMGCL-203ENST00000374490 GFRALQ6UXV0 394 aa11.5□□□□□ -0.57
HMGCL-203ENST00000374490 Q8N7P7 452 aa11.5□□□□□ -0.57
HMGCL-203ENST00000374490 Q8TCH9 128 aa11.5□□□□□ -0.57
HMGCL-203ENST00000374490 ENY2Q9NPA8 101 aa11.5□□□□□ -0.57
HMGCL-203ENST00000374490 IL19Q9UHD0 177 aa11.5□□□□□ -0.57
HMGCL-203ENST00000374490 TCF19Q9Y242 345 aa11.5□□□□□ -0.57
HMGCL-203ENST00000374490 FOXA2Q9Y261 457 aaPredicted RBP11.5□□□□□ -0.57
HMGCL-203ENST00000374490 C15orf61A6NNL5 157 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms