RNA–Protein interactions for RNA: ENST00000374346.7

PTPN20-204, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 2,481 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-204ENST00000374346 FAM234AQ9H0X4 552 aa9.46□□□□□ -0.89
PTPN20-204ENST00000374346 TMEM140Q9NV12 185 aa9.46□□□□□ -0.89
PTPN20-204ENST00000374346 PROCRQ9UNN8 238 aa9.46□□□□□ -0.89
PTPN20-204ENST00000374346 TRAV17A0A0B4J275 112 aa9.46□□□□□ -0.9
PTPN20-204ENST00000374346 GFRA3O60609 400 aa9.46□□□□□ -0.9
PTPN20-204ENST00000374346 VDAC2P45880 294 aaPredicted RBP9.46□□□□□ -0.9
PTPN20-204ENST00000374346 CCL11P51671 97 aa9.46□□□□□ -0.9
PTPN20-204ENST00000374346 SSTP61278 116 aa9.46□□□□□ -0.9
PTPN20-204ENST00000374346 RHOBP62745 196 aa9.46□□□□□ -0.9
PTPN20-204ENST00000374346 TEPPQ6URK8 271 aa9.46□□□□□ -0.9
PTPN20-204ENST00000374346 FAM169BQ8N8A8 192 aa9.46□□□□□ -0.9
PTPN20-204ENST00000374346 C9orf106Q8NAJ2 232 aa9.46□□□□□ -0.9
PTPN20-204ENST00000374346 CORO2AQ92828 525 aa9.46□□□□□ -0.9
PTPN20-204ENST00000374346 MS4A5Q9H3V2 200 aa9.46□□□□□ -0.9
PTPN20-204ENST00000374346 IGHV1-18A0A0C4DH31 117 aa9.45□□□□□ -0.9
PTPN20-204ENST00000374346 F2RL2O00254 374 aa9.45□□□□□ -0.9
PTPN20-204ENST00000374346 ITGB1BP1O14713 200 aa9.45□□□□□ -0.9
PTPN20-204ENST00000374346 RRHO14718 337 aa9.45□□□□□ -0.9
PTPN20-204ENST00000374346 CFHR2P36980 270 aa9.45□□□□□ -0.9
PTPN20-204ENST00000374346 RELBQ01201 579 aa9.45□□□□□ -0.9
PTPN20-204ENST00000374346 SGMS2Q8NHU3 365 aa9.45□□□□□ -0.9
PTPN20-204ENST00000374346 PLPPR2Q96GM1 343 aa9.45□□□□□ -0.9
PTPN20-204ENST00000374346 MGST2Q99735 147 aa9.45□□□□□ -0.9
PTPN20-204ENST00000374346 GGTLC1Q9BX51 225 aa9.45□□□□□ -0.9
PTPN20-204ENST00000374346 IGKV1D-17A0A075B6S4 117 aa9.45□□□□□ -0.9
PTPN20-204ENST00000374346 AHRRA9YTQ3 701 aa9.45□□□□□ -0.9
PTPN20-204ENST00000374346 PLA2G5P39877 138 aa9.45□□□□□ -0.9
PTPN20-204ENST00000374346 RPL39P5Q59GN2 51 aa9.45□□□□□ -0.9
PTPN20-204ENST00000374346 BHLHA15Q7RTS1 189 aaPredicted RBP9.45□□□□□ -0.9
PTPN20-204ENST00000374346 TMEM144Q7Z5S9 345 aa9.45□□□□□ -0.9
PTPN20-204ENST00000374346 DEFB123Q8N688 67 aa9.45□□□□□ -0.9
PTPN20-204ENST00000374346 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.45□□□□□ -0.9
PTPN20-204ENST00000374346 MEGF10Q96KG7 1140 aa9.45□□□□□ -0.9
PTPN20-204ENST00000374346 UHRF2Q96PU4 802 aa9.45□□□□□ -0.9
PTPN20-204ENST00000374346 TCF19Q9Y242 345 aa9.45□□□□□ -0.9
PTPN20-204ENST00000374346 TRAV9-1A0A075B6T8 112 aa9.44□□□□□ -0.9
PTPN20-204ENST00000374346 A8MXE2 369 aa9.44□□□□□ -0.9
PTPN20-204ENST00000374346 PROP1O75360 226 aa9.44□□□□□ -0.9
PTPN20-204ENST00000374346 PAX1P15863 534 aa9.44□□□□□ -0.9
PTPN20-204ENST00000374346 EGR1P18146 543 aa9.44□□□□□ -0.9
PTPN20-204ENST00000374346 BMP5P22003 454 aa9.44□□□□□ -0.9
PTPN20-204ENST00000374346 LOXL3P58215 753 aa9.44□□□□□ -0.9
PTPN20-204ENST00000374346 MIC13Q5XKP0 118 aa9.44□□□□□ -0.9
PTPN20-204ENST00000374346 VKORC1L1Q8N0U8 176 aa9.44□□□□□ -0.9
PTPN20-204ENST00000374346 ABHD12Q8N2K0 398 aa9.44□□□□□ -0.9
PTPN20-204ENST00000374346 GBGT1Q8N5D6 347 aa9.44□□□□□ -0.9
PTPN20-204ENST00000374346 SLC24A4Q8NFF2 622 aa9.44□□□□□ -0.9
PTPN20-204ENST00000374346 FDCSPQ8NFU4 85 aa9.44□□□□□ -0.9
PTPN20-204ENST00000374346 DERL1Q9BUN8 251 aa9.44□□□□□ -0.9
PTPN20-204ENST00000374346 IFI27L2Q9H2X8 130 aa9.44□□□□□ -0.9
PTPN20-204ENST00000374346 CACNA1GO43497 2377 aa9.44□□□□□ -0.9
PTPN20-204ENST00000374346 C15orf61A6NNL5 157 aa9.44□□□□□ -0.9
PTPN20-204ENST00000374346 A8MWP6 167 aa9.44□□□□□ -0.9
PTPN20-204ENST00000374346 PRSS46E5RG02 174 aa9.44□□□□□ -0.9
PTPN20-204ENST00000374346 NPY1RP25929 384 aa9.44□□□□□ -0.9
PTPN20-204ENST00000374346 OR10G8Q8NGN5 311 aa9.44□□□□□ -0.9
PTPN20-204ENST00000374346 ADTRPQ96IZ2 230 aa9.44□□□□□ -0.9
PTPN20-204ENST00000374346 NCOR1P1Q9H4R4 102 aa9.44□□□□□ -0.9
PTPN20-204ENST00000374346 ZNF71Q9NQZ8 489 aaPredicted RBP9.44□□□□□ -0.9
PTPN20-204ENST00000374346 AURKAIP1Q9NWT8 199 aaPredicted RBP9.44□□□□□ -0.9
PTPN20-204ENST00000374346 CALYQ9NYX4 217 aa9.44□□□□□ -0.9
PTPN20-204ENST00000374346 M0R296 226 aa9.43□□□□□ -0.9
PTPN20-204ENST00000374346 C1QTNF9P0C862 333 aa9.43□□□□□ -0.9
PTPN20-204ENST00000374346 THBS3P49746 956 aa9.43□□□□□ -0.9
PTPN20-204ENST00000374346 RPL15P61313 204 aaKnown RBP9.43□□□□□ -0.9
PTPN20-204ENST00000374346 RPL19P84098 196 aaKnown RBP9.43□□□□□ -0.9
PTPN20-204ENST00000374346 ZNF664Q8N3J9 261 aa9.43□□□□□ -0.9
PTPN20-204ENST00000374346 GCSAMQ8N6F7 178 aa9.43□□□□□ -0.9
PTPN20-204ENST00000374346 ELOVL5Q9NYP7 299 aa9.43□□□□□ -0.9
PTPN20-204ENST00000374346 TP53TG5Q9Y2B4 290 aa9.43□□□□□ -0.9
PTPN20-204ENST00000374346 LSM4Q9Y4Z0 139 aaKnown RBP9.43□□□□□ -0.9
PTPN20-204ENST00000374346 WDFY4Q6ZS81 3184 aa9.43□□□□□ -0.9
PTPN20-204ENST00000374346 IL6RP08887 468 aaPredicted RBP9.43□□□□□ -0.9
PTPN20-204ENST00000374346 GCHFRP30047 84 aa9.43□□□□□ -0.9
PTPN20-204ENST00000374346 TIMP3P35625 211 aa9.43□□□□□ -0.9
PTPN20-204ENST00000374346 HSPE1P61604 102 aaKnown RBP9.43□□□□□ -0.9
PTPN20-204ENST00000374346 ZNRF1Q8ND25 227 aa9.43□□□□□ -0.9
PTPN20-204ENST00000374346 BEND2Q8NDZ0 799 aa9.43□□□□□ -0.9
PTPN20-204ENST00000374346 Q8TCH9 128 aa9.43□□□□□ -0.9
PTPN20-204ENST00000374346 SSMEM1Q8WWF3 244 aa9.43□□□□□ -0.9
PTPN20-204ENST00000374346 OR2V2Q96R30 315 aa9.43□□□□□ -0.9
PTPN20-204ENST00000374346 OPN3Q9H1Y3 402 aaPredicted RBP9.43□□□□□ -0.9
PTPN20-204ENST00000374346 FOXA2Q9Y261 457 aaPredicted RBP9.43□□□□□ -0.9
PTPN20-204ENST00000374346 FRYQ5TBA9 3013 aa9.43□□□□□ -0.9
PTPN20-204ENST00000374346 TET2Q6N021 2002 aaPredicted RBP9.42□□□□□ -0.9
PTPN20-204ENST00000374346 FNDC10F2Z333 226 aa9.42□□□□□ -0.9
PTPN20-204ENST00000374346 RPL29P47914 159 aaKnown RBP9.42□□□□□ -0.9
PTPN20-204ENST00000374346 ZNF134P52741 427 aa9.42□□□□□ -0.9
PTPN20-204ENST00000374346 KLF3P57682 345 aaPredicted RBP9.42□□□□□ -0.9
PTPN20-204ENST00000374346 ZNF90Q03938 601 aa9.42□□□□□ -0.9
PTPN20-204ENST00000374346 TRIP6Q15654 476 aaKnown RBP9.42□□□□□ -0.9
PTPN20-204ENST00000374346 EFNB3Q15768 340 aa9.42□□□□□ -0.9
PTPN20-204ENST00000374346 IGFL2Q6UWQ7 119 aa9.42□□□□□ -0.9
PTPN20-204ENST00000374346 STPG3Q8N7X2 389 aa9.42□□□□□ -0.9
PTPN20-204ENST00000374346 DDB2Q92466 427 aa9.42□□□□□ -0.9
PTPN20-204ENST00000374346 NDUFAF3Q9BU61 184 aa9.42□□□□□ -0.9
PTPN20-204ENST00000374346 SFXN3Q9BWM7 321 aa9.42□□□□□ -0.9
PTPN20-204ENST00000374346 LY96Q9Y6Y9 160 aa9.42□□□□□ -0.9
PTPN20-204ENST00000374346 INTS1Q8N201 2190 aaKnown RBP9.42□□□□□ -0.9
PTPN20-204ENST00000374346 PCNX2A6NKB5 2137 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms