RNA–Protein interactions for RNA: ENST00000372407.4

PTPRF-203, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,600 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-203ENST00000372407 OR1N2Q8NGR9 330 aa9.73□□□□□ -0.85
PTPRF-203ENST00000372407 LOC102724200A0A096LPH7 203 aaPredicted RBP9.73□□□□□ -0.85
PTPRF-203ENST00000372407 LNP1A1A4G5 178 aa9.73□□□□□ -0.85
PTPRF-203ENST00000372407 OR4C46A6NHA9 309 aa9.73□□□□□ -0.85
PTPRF-203ENST00000372407 PPP1R32Q7Z5V6 425 aa9.73□□□□□ -0.85
PTPRF-203ENST00000372407 OR5P3Q8WZ94 311 aa9.73□□□□□ -0.85
PTPRF-203ENST00000372407 TMEM186Q96B77 213 aa9.73□□□□□ -0.85
PTPRF-203ENST00000372407 TMEM56-RWDD3S4R434 201 aa9.73□□□□□ -0.85
PTPRF-203ENST00000372407 MYO16Q9Y6X6 1858 aa9.73□□□□□ -0.85
PTPRF-203ENST00000372407 GPR179Q6PRD1 2367 aa9.73□□□□□ -0.85
PTPRF-203ENST00000372407 TRAV30A0A087WSZ9 112 aa9.73□□□□□ -0.85
PTPRF-203ENST00000372407 IGKV1D-43A0A0B4J1Z2 117 aa9.73□□□□□ -0.85
PTPRF-203ENST00000372407 FOLR2P14207 255 aa9.73□□□□□ -0.85
PTPRF-203ENST00000372407 BTF3P20290 206 aaKnown RBP9.73□□□□□ -0.85
PTPRF-203ENST00000372407 FCGR2BP31994 310 aaPredicted RBP9.73□□□□□ -0.85
PTPRF-203ENST00000372407 HINT1P49773 126 aaPredicted RBP9.73□□□□□ -0.85
PTPRF-203ENST00000372407 NPIPB3Q92617 1050 aa9.73□□□□□ -0.85
PTPRF-203ENST00000372407 DMRT1Q9Y5R6 373 aa9.73□□□□□ -0.85
PTPRF-203ENST00000372407 LOC101059948A0A1B0GTJ6 334 aa9.73□□□□□ -0.85
PTPRF-203ENST00000372407 A0A1W2PS18 150 aa9.73□□□□□ -0.85
PTPRF-203ENST00000372407 OR10J6PQ8NGY7 276 aa9.73□□□□□ -0.85
PTPRF-203ENST00000372407 C16orf92Q96LL3 132 aa9.73□□□□□ -0.85
PTPRF-203ENST00000372407 TMEM70Q9BUB7 260 aa9.73□□□□□ -0.85
PTPRF-203ENST00000372407 AICDAQ9GZX7 198 aa9.73□□□□□ -0.85
PTPRF-203ENST00000372407 TRBV9A0A0B4J1U6 114 aa9.72□□□□□ -0.85
PTPRF-203ENST00000372407 TMEM238LA0A1B0GVL6 79 aa9.72□□□□□ -0.85
PTPRF-203ENST00000372407 GAGE10A6NGK3 116 aa9.72□□□□□ -0.85
PTPRF-203ENST00000372407 A6NJY4 79 aa9.72□□□□□ -0.85
PTPRF-203ENST00000372407 GCHFRP30047 84 aa9.72□□□□□ -0.85
PTPRF-203ENST00000372407 SLC25A34Q6PIV7 304 aa9.72□□□□□ -0.85
PTPRF-203ENST00000372407 DYNLRB2Q8TF09 96 aa9.72□□□□□ -0.85
PTPRF-203ENST00000372407 SRSF12Q8WXF0 261 aaKnown RBP9.72□□□□□ -0.85
PTPRF-203ENST00000372407 METTL26Q96S19 204 aa9.72□□□□□ -0.85
PTPRF-203ENST00000372407 PLSCR2Q9NRY7 297 aa9.72□□□□□ -0.85
PTPRF-203ENST00000372407 CHCHD2Q9Y6H1 151 aaPredicted RBP9.72□□□□□ -0.85
PTPRF-203ENST00000372407 RNF222A6NCQ9 220 aa9.72□□□□□ -0.85
PTPRF-203ENST00000372407 SYNGR3O43761 229 aa9.72□□□□□ -0.85
PTPRF-203ENST00000372407 AMY1AP04745 511 aa9.72□□□□□ -0.85
PTPRF-203ENST00000372407 EGR1P18146 543 aa9.72□□□□□ -0.85
PTPRF-203ENST00000372407 RPS20P60866 119 aaKnown RBP9.72□□□□□ -0.85
PTPRF-203ENST00000372407 ZNF146Q15072 292 aa9.72□□□□□ -0.85
PTPRF-203ENST00000372407 Q6ZT83 130 aa9.72□□□□□ -0.85
PTPRF-203ENST00000372407 LEAP2Q969E1 77 aa9.72□□□□□ -0.85
PTPRF-203ENST00000372407 PGLYRP4Q96LB8 373 aa9.72□□□□□ -0.85
PTPRF-203ENST00000372407 TIMP4Q99727 224 aa9.72□□□□□ -0.85
PTPRF-203ENST00000372407 MRPL32Q9BYC8 188 aaKnown RBP9.72□□□□□ -0.85
PTPRF-203ENST00000372407 RALGAPA1Q6GYQ0 2036 aa9.72□□□□□ -0.85
PTPRF-203ENST00000372407 DOCK10Q96BY6 2186 aa9.72□□□□□ -0.85
PTPRF-203ENST00000372407 A0A1B0GTI1 187 aa9.72□□□□□ -0.85
PTPRF-203ENST00000372407 TGFBR3LH3BV60 316 aa9.72□□□□□ -0.85
PTPRF-203ENST00000372407 TBX6O95947 436 aaPredicted RBP9.72□□□□□ -0.85
PTPRF-203ENST00000372407 PF4V1P10720 104 aa9.72□□□□□ -0.85
PTPRF-203ENST00000372407 SFTPCP11686 197 aa9.72□□□□□ -0.85
PTPRF-203ENST00000372407 C2orf83Q53S99 150 aa9.72□□□□□ -0.85
PTPRF-203ENST00000372407 UNQ5815/PRO19632Q6UWF5 114 aa9.72□□□□□ -0.85
PTPRF-203ENST00000372407 NR2C2APQ86WQ0 139 aa9.72□□□□□ -0.85
PTPRF-203ENST00000372407 ZCCHC14Q8WYQ9 949 aaKnown RBP9.72□□□□□ -0.85
PTPRF-203ENST00000372407 SFRP2Q96HF1 295 aa9.72□□□□□ -0.85
PTPRF-203ENST00000372407 HLA-DRB1P01911 266 aa9.71□□□□□ -0.85
PTPRF-203ENST00000372407 EFNB1P98172 346 aa9.71□□□□□ -0.85
PTPRF-203ENST00000372407 OR4A47Q6IF82 309 aa9.71□□□□□ -0.85
PTPRF-203ENST00000372407 CYP2G1PQ6ZSU1 146 aa9.71□□□□□ -0.85
PTPRF-203ENST00000372407 TCF24Q7RTU0 167 aa9.71□□□□□ -0.85
PTPRF-203ENST00000372407 PQLC2LA1A4F0 135 aa9.71□□□□□ -0.85
PTPRF-203ENST00000372407 RFPL3SP0C7P2 107 aa9.71□□□□□ -0.86
PTPRF-203ENST00000372407 GLRXP35754 106 aa9.71□□□□□ -0.86
PTPRF-203ENST00000372407 LCN2P80188 198 aa9.71□□□□□ -0.86
PTPRF-203ENST00000372407 VKORC1L1Q8N0U8 176 aa9.71□□□□□ -0.86
PTPRF-203ENST00000372407 SMIM12Q96EX1 92 aa9.71□□□□□ -0.86
PTPRF-203ENST00000372407 C12orf77C9JDV5 145 aa9.71□□□□□ -0.86
PTPRF-203ENST00000372407 EBLN2Q6P2I7 272 aa9.71□□□□□ -0.86
PTPRF-203ENST00000372407 OR10AG1Q8NH19 301 aa9.71□□□□□ -0.86
PTPRF-203ENST00000372407 PPIAL4CA0A0B4J2A2 164 aa9.7□□□□□ -0.86
PTPRF-203ENST00000372407 RRHO14718 337 aa9.7□□□□□ -0.86
PTPRF-203ENST00000372407 SIAH2O43255 324 aa9.7□□□□□ -0.86
PTPRF-203ENST00000372407 PPIAL4GP0DN37 164 aa9.7□□□□□ -0.86
PTPRF-203ENST00000372407 TCTAP57738 103 aa9.7□□□□□ -0.86
PTPRF-203ENST00000372407 RSPO4Q2I0M5 234 aaPredicted RBP9.7□□□□□ -0.86
PTPRF-203ENST00000372407 TM4SF20Q53R12 229 aa9.7□□□□□ -0.86
PTPRF-203ENST00000372407 OR10S1Q8NGN2 331 aa9.7□□□□□ -0.86
PTPRF-203ENST00000372407 MAP1LC3AQ9H492 121 aa9.7□□□□□ -0.86
PTPRF-203ENST00000372407 RALGAPA2Q2PPJ7 1873 aa9.7□□□□□ -0.86
PTPRF-203ENST00000372407 GRIFINA4D1Z8 144 aa9.7□□□□□ -0.86
PTPRF-203ENST00000372407 H3BVH4 76 aa9.7□□□□□ -0.86
PTPRF-203ENST00000372407 SS18L1O75177 396 aaPredicted RBP9.7□□□□□ -0.86
PTPRF-203ENST00000372407 SOD3P08294 240 aa9.7□□□□□ -0.86
PTPRF-203ENST00000372407 SMAGPQ0VAQ4 97 aa9.7□□□□□ -0.86
PTPRF-203ENST00000372407 NRN1LQ496H8 165 aa9.7□□□□□ -0.86
PTPRF-203ENST00000372407 ZNRF1Q8ND25 227 aa9.7□□□□□ -0.86
PTPRF-203ENST00000372407 GGACTQ9BVM4 153 aa9.7□□□□□ -0.86
PTPRF-203ENST00000372407 PKDREJQ9NTG1 2253 aa9.7□□□□□ -0.86
PTPRF-203ENST00000372407 FBLN5Q9UBX5 448 aa9.7□□□□□ -0.86
PTPRF-203ENST00000372407 CRXO43186 299 aaPredicted RBP9.7□□□□□ -0.86
PTPRF-203ENST00000372407 ZNF883P0CG24 379 aa9.7□□□□□ -0.86
PTPRF-203ENST00000372407 FABP2P12104 132 aa9.7□□□□□ -0.86
PTPRF-203ENST00000372407 RAB9AP51151 201 aa9.7□□□□□ -0.86
PTPRF-203ENST00000372407 ARF6P62330 175 aa9.7□□□□□ -0.86
PTPRF-203ENST00000372407 CLEC2AQ6UVW9 174 aa9.7□□□□□ -0.86
PTPRF-203ENST00000372407 RTBDNQ9BSG5 229 aaPredicted RBP9.7□□□□□ -0.86
PTPRF-203ENST00000372407 NPIPB6E9PJ23 425 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms