RNA–Protein interactions for RNA: ENST00000372232.7

ATG4A-203, Transcript of autophagy related 4A cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4A, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-203ENST00000372232 VKORC1Q9BQB6 163 aa7.44□□□□□ -1.22
ATG4A-203ENST00000372232 GNB4Q9HAV0 340 aa7.44□□□□□ -1.22
ATG4A-203ENST00000372232 R4GMQ9 66 aa7.44□□□□□ -1.22
ATG4A-203ENST00000372232 PI4KAP42356 2102 aa7.44□□□□□ -1.22
ATG4A-203ENST00000372232 PSMB11A5LHX3 300 aa7.44□□□□□ -1.22
ATG4A-203ENST00000372232 FAM231BA6NCW3 169 aa7.44□□□□□ -1.22
ATG4A-203ENST00000372232 SLC33A1O00400 549 aaPredicted RBP7.44□□□□□ -1.22
ATG4A-203ENST00000372232 SOCS1O15524 211 aa7.44□□□□□ -1.22
ATG4A-203ENST00000372232 TTRP02766 147 aa7.44□□□□□ -1.22
ATG4A-203ENST00000372232 CFIP05156 583 aa7.44□□□□□ -1.22
ATG4A-203ENST00000372232 ISG15P05161 165 aa7.44□□□□□ -1.22
ATG4A-203ENST00000372232 CBLN1P23435 193 aa7.44□□□□□ -1.22
ATG4A-203ENST00000372232 TMEM50BP56557 158 aa7.44□□□□□ -1.22
ATG4A-203ENST00000372232 PMP22Q01453 160 aa7.44□□□□□ -1.22
ATG4A-203ENST00000372232 MYBPHQ13203 477 aa7.44□□□□□ -1.22
ATG4A-203ENST00000372232 IL11RAQ14626 422 aa7.44□□□□□ -1.22
ATG4A-203ENST00000372232 HLA-DRB5Q30154 266 aa7.44□□□□□ -1.22
ATG4A-203ENST00000372232 SP6Q3SY56 376 aa7.44□□□□□ -1.22
ATG4A-203ENST00000372232 HAPLN4Q86UW8 402 aa7.44□□□□□ -1.22
ATG4A-203ENST00000372232 OR5A1Q8NGJ0 315 aa7.44□□□□□ -1.22
ATG4A-203ENST00000372232 SGMS2Q8NHU3 365 aa7.44□□□□□ -1.22
ATG4A-203ENST00000372232 MSI2Q96DH6 328 aaKnown RBP7.44□□□□□ -1.22
ATG4A-203ENST00000372232 GMPPAQ96IJ6 420 aaPredicted RBP7.44□□□□□ -1.22
ATG4A-203ENST00000372232 SPXQ9BT56 116 aa7.44□□□□□ -1.22
ATG4A-203ENST00000372232 DEFB126Q9BYW3 111 aa7.44□□□□□ -1.22
ATG4A-203ENST00000372232 ST20Q9HBF5 79 aa7.44□□□□□ -1.22
ATG4A-203ENST00000372232 SS18L2Q9UHA2 77 aa7.44□□□□□ -1.22
ATG4A-203ENST00000372232 PSG8Q9UQ74 426 aa7.44□□□□□ -1.22
ATG4A-203ENST00000372232 CPAMD8Q8IZJ3 1885 aa7.44□□□□□ -1.22
ATG4A-203ENST00000372232 HLA-DRB1P01911 266 aa7.43□□□□□ -1.22
ATG4A-203ENST00000372232 ZNF17P17021 662 aa7.43□□□□□ -1.22
ATG4A-203ENST00000372232 GPM6AP51674 278 aa7.43□□□□□ -1.22
ATG4A-203ENST00000372232 PIGPP57054 158 aa7.43□□□□□ -1.22
ATG4A-203ENST00000372232 FHL3Q13643 280 aa7.43□□□□□ -1.22
ATG4A-203ENST00000372232 ARFRP1Q13795 201 aa7.43□□□□□ -1.22
ATG4A-203ENST00000372232 FAM58AQ8N1B3 248 aa7.43□□□□□ -1.22
ATG4A-203ENST00000372232 OR4A5Q8NH83 315 aa7.43□□□□□ -1.22
ATG4A-203ENST00000372232 EMC6Q9BV81 110 aa7.43□□□□□ -1.22
ATG4A-203ENST00000372232 ST6GALNAC5Q9BVH7 336 aa7.43□□□□□ -1.22
ATG4A-203ENST00000372232 CLEC7AQ9BXN2 247 aa7.43□□□□□ -1.22
ATG4A-203ENST00000372232 PECRQ9BY49 303 aa7.43□□□□□ -1.22
ATG4A-203ENST00000372232 WDR54Q9H977 334 aa7.43□□□□□ -1.22
ATG4A-203ENST00000372232 LOC107986453A0A1B0GWG9 222 aa7.43□□□□□ -1.22
ATG4A-203ENST00000372232 C7orf71A4D174 169 aa7.43□□□□□ -1.22
ATG4A-203ENST00000372232 PDE6DO43924 150 aa7.43□□□□□ -1.22
ATG4A-203ENST00000372232 PMCHP20382 165 aa7.43□□□□□ -1.22
ATG4A-203ENST00000372232 PSMB3P49720 205 aa7.43□□□□□ -1.22
ATG4A-203ENST00000372232 PSG4Q00888 419 aa7.43□□□□□ -1.22
ATG4A-203ENST00000372232 CEACAM21Q3KPI0 293 aa7.43□□□□□ -1.22
ATG4A-203ENST00000372232 ZNF788Q6ZQV5 615 aa7.43□□□□□ -1.22
ATG4A-203ENST00000372232 SEM1Q6ZVN7 128 aa7.43□□□□□ -1.22
ATG4A-203ENST00000372232 BORCS7Q96B45 105 aa7.43□□□□□ -1.22
ATG4A-203ENST00000372232 MBD6Q96DN6 1003 aa7.43□□□□□ -1.22
ATG4A-203ENST00000372232 BANF2Q9H503 90 aa7.43□□□□□ -1.22
ATG4A-203ENST00000372232 VSIRQ9H7M9 311 aa7.43□□□□□ -1.22
ATG4A-203ENST00000372232 NXT1Q9UKK6 140 aaKnown RBP7.43□□□□□ -1.22
ATG4A-203ENST00000372232 TSSC4Q9Y5U2 329 aaPredicted RBP7.43□□□□□ -1.22
ATG4A-203ENST00000372232 FREM3P0C091 2139 aa7.42□□□□□ -1.22
ATG4A-203ENST00000372232 EXPH5Q8NEV8 1989 aa7.42□□□□□ -1.22
ATG4A-203ENST00000372232 LOC102723996A0A087X1L8 192 aa7.42□□□□□ -1.22
ATG4A-203ENST00000372232 TRBV9A0A0B4J1U6 114 aa7.42□□□□□ -1.22
ATG4A-203ENST00000372232 C9orf118A6NHY6 69 aa7.42□□□□□ -1.22
ATG4A-203ENST00000372232 CST7O76096 145 aa7.42□□□□□ -1.22
ATG4A-203ENST00000372232 AGFG2O95081 481 aa7.42□□□□□ -1.22
ATG4A-203ENST00000372232 IFNA5P01569 189 aa7.42□□□□□ -1.22
ATG4A-203ENST00000372232 GATA2P23769 480 aaPredicted RBP7.42□□□□□ -1.22
ATG4A-203ENST00000372232 MDH2P40926 338 aaKnown RBP7.42□□□□□ -1.22
ATG4A-203ENST00000372232 NKX2-1P43699 371 aaPredicted RBP7.42□□□□□ -1.22
ATG4A-203ENST00000372232 FUT6P51993 359 aa7.42□□□□□ -1.22
ATG4A-203ENST00000372232 ZXDAP98168 799 aa7.42□□□□□ -1.22
ATG4A-203ENST00000372232 PCOLCEQ15113 449 aa7.42□□□□□ -1.22
ATG4A-203ENST00000372232 TBR1Q16650 682 aa7.42□□□□□ -1.22
ATG4A-203ENST00000372232 FOXI2Q6ZQN5 318 aa7.42□□□□□ -1.22
ATG4A-203ENST00000372232 BLNKQ8WV28 456 aa7.42□□□□□ -1.22
ATG4A-203ENST00000372232 RNF133Q8WVZ7 376 aa7.42□□□□□ -1.22
ATG4A-203ENST00000372232 ZC2HC1AQ96GY0 325 aa7.42□□□□□ -1.22
ATG4A-203ENST00000372232 ZNF286AQ9HBT8 521 aa7.42□□□□□ -1.22
ATG4A-203ENST00000372232 TAAR3PQ9P1P4 343 aa7.42□□□□□ -1.22
ATG4A-203ENST00000372232 SLC25A10Q9UBX3 287 aaPredicted RBP7.42□□□□□ -1.22
ATG4A-203ENST00000372232 CHCHD2Q9Y6H1 151 aaPredicted RBP7.42□□□□□ -1.22
ATG4A-203ENST00000372232 A0A1B0GW15 77 aa7.41□□□□□ -1.22
ATG4A-203ENST00000372232 PATE3B3GLJ2 98 aa7.41□□□□□ -1.22
ATG4A-203ENST00000372232 NTN3O00634 580 aaPredicted RBP7.41□□□□□ -1.22
ATG4A-203ENST00000372232 LMX1BO60663 402 aa7.41□□□□□ -1.22
ATG4A-203ENST00000372232 PPOXP50336 477 aa7.41□□□□□ -1.22
ATG4A-203ENST00000372232 SERF2P84101 59 aa7.41□□□□□ -1.22
ATG4A-203ENST00000372232 LCN12Q6JVE5 192 aa7.41□□□□□ -1.22
ATG4A-203ENST00000372232 UEVLDQ8IX04 471 aa7.41□□□□□ -1.22
ATG4A-203ENST00000372232 FADS6Q8N9I5 356 aa7.41□□□□□ -1.22
ATG4A-203ENST00000372232 RTN4IP1Q8WWV3 396 aaPredicted RBP7.41□□□□□ -1.22
ATG4A-203ENST00000372232 ARHGAP5-AS1Q96IT6 56 aa7.41□□□□□ -1.22
ATG4A-203ENST00000372232 HINT2Q9BX68 163 aa7.41□□□□□ -1.22
ATG4A-203ENST00000372232 ULBP2Q9BZM5 246 aa7.41□□□□□ -1.22
ATG4A-203ENST00000372232 COMMD5Q9GZQ3 224 aa7.41□□□□□ -1.22
ATG4A-203ENST00000372232 FNDC4Q9H6D8 234 aaPredicted RBP7.41□□□□□ -1.22
ATG4A-203ENST00000372232 CENPMQ9NSP4 180 aa7.41□□□□□ -1.22
ATG4A-203ENST00000372232 MRPL16Q9NX20 251 aaKnown RBP7.41□□□□□ -1.22
ATG4A-203ENST00000372232 JKAMPQ9P055 326 aa7.41□□□□□ -1.22
ATG4A-203ENST00000372232 IGHV1-45A0A0A0MS14 117 aa7.41□□□□□ -1.22
ATG4A-203ENST00000372232 TEX48A0A1B0GUV7 120 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms