RNA–Protein interactions for RNA: ENST00000372146.4

GTF3C4-201, Transcript of general transcription factor IIIC subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C4, Length 9,043 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4-201ENST00000372146 GAGE12BA1L429 117 aa13.22□□□□□ -0.29
GTF3C4-201ENST00000372146 GABRG2P18507 467 aa13.22□□□□□ -0.29
GTF3C4-201ENST00000372146 ZNF793Q6ZN11 406 aa13.22□□□□□ -0.29
GTF3C4-201ENST00000372146 VSTM2LQ96N03 204 aa13.22□□□□□ -0.29
GTF3C4-201ENST00000372146 ADMP35318 185 aa13.22□□□□□ -0.29
GTF3C4-201ENST00000372146 IFITM3Q01628 133 aa13.22□□□□□ -0.29
GTF3C4-201ENST00000372146 GP6Q9HCN6 339 aa13.22□□□□□ -0.29
GTF3C4-201ENST00000372146 VENTXO95231 258 aa13.21□□□□□ -0.29
GTF3C4-201ENST00000372146 DEFB103AP81534 67 aa13.21□□□□□ -0.29
GTF3C4-201ENST00000372146 CXorf66Q5JRM2 361 aaPredicted RBP13.21□□□□□ -0.29
GTF3C4-201ENST00000372146 OR10J3Q5JRS4 329 aa13.21□□□□□ -0.29
GTF3C4-201ENST00000372146 VAX1Q5SQQ9 334 aa13.21□□□□□ -0.29
GTF3C4-201ENST00000372146 G6PC2Q9NQR9 355 aa13.21□□□□□ -0.29
GTF3C4-201ENST00000372146 PLCE1Q9P212 2302 aa13.21□□□□□ -0.29
GTF3C4-201ENST00000372146 PLXND1Q9Y4D7 1925 aa13.21□□□□□ -0.29
GTF3C4-201ENST00000372146 SBF2Q86WG5 1849 aa13.21□□□□□ -0.29
GTF3C4-201ENST00000372146 MUC21A0A0G2JKD1 596 aa13.21□□□□□ -0.29
GTF3C4-201ENST00000372146 MUC21A0A140T8X8 626 aa13.21□□□□□ -0.29
GTF3C4-201ENST00000372146 CDK2AP2O75956 126 aa13.21□□□□□ -0.29
GTF3C4-201ENST00000372146 MUC21Q5SSG8 566 aa13.21□□□□□ -0.29
GTF3C4-201ENST00000372146 HMGCLL1Q8TB92 370 aa13.21□□□□□ -0.29
GTF3C4-201ENST00000372146 TRAV9-2A0A087WT02 112 aa13.21□□□□□ -0.29
GTF3C4-201ENST00000372146 CEACAM4O75871 244 aa13.21□□□□□ -0.29
GTF3C4-201ENST00000372146 MYF5P13349 255 aa13.21□□□□□ -0.29
GTF3C4-201ENST00000372146 TMEM252Q8N6L7 170 aa13.21□□□□□ -0.29
GTF3C4-201ENST00000372146 A0A1B0GUT8 65 aa13.21□□□□□ -0.3
GTF3C4-201ENST00000372146 OR11H4Q8NGC9 324 aa13.21□□□□□ -0.3
GTF3C4-201ENST00000372146 OR51G1Q8NGK1 321 aa13.21□□□□□ -0.3
GTF3C4-201ENST00000372146 FAM90A27PA6NNH2 459 aa13.21□□□□□ -0.3
GTF3C4-201ENST00000372146 ORMDL3Q8N138 153 aa13.21□□□□□ -0.3
GTF3C4-201ENST00000372146 VSIG8P0DPA2 414 aa13.2□□□□□ -0.3
GTF3C4-201ENST00000372146 FRMPD3Q5JV73 1810 aa13.2□□□□□ -0.3
GTF3C4-201ENST00000372146 PNLIPP16233 465 aa13.2□□□□□ -0.3
GTF3C4-201ENST00000372146 RPL8P62917 257 aaKnown RBP13.2□□□□□ -0.3
GTF3C4-201ENST00000372146 SLC25A53Q5H9E4 307 aa13.2□□□□□ -0.3
GTF3C4-201ENST00000372146 TNFSF15O95150 251 aa13.2□□□□□ -0.3
GTF3C4-201ENST00000372146 ZNF488Q96MN9 340 aa13.2□□□□□ -0.3
GTF3C4-201ENST00000372146 NDUFS6O75380 124 aaKnown RBP13.2□□□□□ -0.3
GTF3C4-201ENST00000372146 LINC00305Q7Z4B0 112 aa13.2□□□□□ -0.3
GTF3C4-201ENST00000372146 FOXQ1Q9C009 403 aa13.2□□□□□ -0.3
GTF3C4-201ENST00000372146 HELZP42694 1942 aaKnown RBP13.2□□□□□ -0.3
GTF3C4-201ENST00000372146 PLXNA1Q9UIW2 1896 aa13.2□□□□□ -0.3
GTF3C4-201ENST00000372146 A0A087WWC5 75 aa13.2□□□□□ -0.3
GTF3C4-201ENST00000372146 C9JCJ5 164 aa13.2□□□□□ -0.3
GTF3C4-201ENST00000372146 RAMP1O60894 148 aa13.2□□□□□ -0.3
GTF3C4-201ENST00000372146 NPC2P61916 151 aa13.2□□□□□ -0.3
GTF3C4-201ENST00000372146 NXT2Q9NPJ8 142 aaKnown RBP13.2□□□□□ -0.3
GTF3C4-201ENST00000372146 DPM2O94777 84 aa13.2□□□□□ -0.3
GTF3C4-201ENST00000372146 PSG1P11464 419 aa13.2□□□□□ -0.3
GTF3C4-201ENST00000372146 CEACAM21Q3KPI0 293 aa13.2□□□□□ -0.3
GTF3C4-201ENST00000372146 C8orf88P0DMB2 117 aa13.2□□□□□ -0.3
GTF3C4-201ENST00000372146 PLA2G3Q9NZ20 509 aa13.2□□□□□ -0.3
GTF3C4-201ENST00000372146 CD1AP06126 327 aa13.19□□□□□ -0.3
GTF3C4-201ENST00000372146 PDFQ9HBH1 243 aa13.19□□□□□ -0.3
GTF3C4-201ENST00000372146 MED12LQ86YW9 2145 aa13.19□□□□□ -0.3
GTF3C4-201ENST00000372146 RPL31P62899 125 aaKnown RBP13.19□□□□□ -0.3
GTF3C4-201ENST00000372146 THAP10Q9P2Z0 257 aaPredicted RBP13.19□□□□□ -0.3
GTF3C4-201ENST00000372146 DENND4AQ7Z401 1863 aa13.19□□□□□ -0.3
GTF3C4-201ENST00000372146 LOC285556D6RIA3 1793 aa13.19□□□□□ -0.3
GTF3C4-201ENST00000372146 PRR32B1ATL7 298 aa13.19□□□□□ -0.3
GTF3C4-201ENST00000372146 TDGF1P13385 188 aa13.19□□□□□ -0.3
GTF3C4-201ENST00000372146 ERVK11-1P61568 191 aa13.19□□□□□ -0.3
GTF3C4-201ENST00000372146 ST20Q9HBF5 79 aa13.19□□□□□ -0.3
GTF3C4-201ENST00000372146 CRPP02741 224 aa13.19□□□□□ -0.3
GTF3C4-201ENST00000372146 CFAP161Q6P656 301 aa13.19□□□□□ -0.3
GTF3C4-201ENST00000372146 SELENOHQ8IZQ5 122 aaKnown RBP13.19□□□□□ -0.3
GTF3C4-201ENST00000372146 PCDH15Q96QU1 1955 aa13.19□□□□□ -0.3
GTF3C4-201ENST00000372146 TBX6O95947 436 aaPredicted RBP13.19□□□□□ -0.3
GTF3C4-201ENST00000372146 YAE1D1Q9NRH1 226 aa13.19□□□□□ -0.3
GTF3C4-201ENST00000372146 CARHSP1Q9Y2V2 147 aaKnown RBP13.19□□□□□ -0.3
GTF3C4-201ENST00000372146 H7C1H1 209 aa13.18□□□□□ -0.3
GTF3C4-201ENST00000372146 DLEU1O43261 78 aa13.18□□□□□ -0.3
GTF3C4-201ENST00000372146 DLX4Q92988 240 aaPredicted RBP13.18□□□□□ -0.3
GTF3C4-201ENST00000372146 FMC1Q96HJ9 113 aa13.18□□□□□ -0.3
GTF3C4-201ENST00000372146 JMJD8Q96S16 334 aa13.18□□□□□ -0.3
GTF3C4-201ENST00000372146 NAA38Q9BRA0 125 aaKnown RBP13.18□□□□□ -0.3
GTF3C4-201ENST00000372146 SPANXA1Q9NS26 97 aa13.18□□□□□ -0.3
GTF3C4-201ENST00000372146 ISXQ2M1V0 245 aa13.18□□□□□ -0.3
GTF3C4-201ENST00000372146 C1orf43Q9BWL3 253 aa13.18□□□□□ -0.3
GTF3C4-201ENST00000372146 R4GN57 208 aa13.18□□□□□ -0.3
GTF3C4-201ENST00000372146 IGKV3-20P01619 116 aa13.18□□□□□ -0.3
GTF3C4-201ENST00000372146 LPAR2Q9HBW0 351 aa13.18□□□□□ -0.3
GTF3C4-201ENST00000372146 SCO2A0A1W2PP80 73 aa13.18□□□□□ -0.3
GTF3C4-201ENST00000372146 CLDN14O95500 239 aa13.18□□□□□ -0.3
GTF3C4-201ENST00000372146 PRR35P0CG20 571 aa13.18□□□□□ -0.3
GTF3C4-201ENST00000372146 GPHA2Q96T91 129 aa13.18□□□□□ -0.3
GTF3C4-201ENST00000372146 EP300Q09472 2414 aaPredicted RBP13.18□□□□□ -0.3
GTF3C4-201ENST00000372146 KLF12Q9Y4X4 402 aa13.18□□□□□ -0.3
GTF3C4-201ENST00000372146 HSD52Q0P140 79 aa13.18□□□□□ -0.3
GTF3C4-201ENST00000372146 IGHV3-64A0A075B6Q5 118 aa13.18□□□□□ -0.3
GTF3C4-201ENST00000372146 EGR1P18146 543 aa13.18□□□□□ -0.3
GTF3C4-201ENST00000372146 RPL27AP46776 148 aaKnown RBP13.18□□□□□ -0.3
GTF3C4-201ENST00000372146 TMEM174Q8WUU8 243 aa13.18□□□□□ -0.3
GTF3C4-201ENST00000372146 A0A0G2JMM0 328 aa13.17□□□□□ -0.3
GTF3C4-201ENST00000372146 A0A1W2PPB8 328 aa13.17□□□□□ -0.3
GTF3C4-201ENST00000372146 KIR3DP1A8MWS1 328 aa13.17□□□□□ -0.3
GTF3C4-201ENST00000372146 HIST1H2BKO60814 126 aa13.17□□□□□ -0.3
GTF3C4-201ENST00000372146 HIST1H2BJP06899 126 aa13.17□□□□□ -0.3
GTF3C4-201ENST00000372146 HIST1H2BOP23527 126 aa13.17□□□□□ -0.3
GTF3C4-201ENST00000372146 HIST1H2BBP33778 126 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms