RNA–Protein interactions for RNA: ENST00000370651.5

PTP4A1-201, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 5,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-201ENST00000370651 TMEM70Q9BUB7 260 aa14.57□□□□□ -0.08
PTP4A1-201ENST00000370651 SYNGR3O43761 229 aa14.57□□□□□ -0.08
PTP4A1-201ENST00000370651 RPL23P62829 140 aaKnown RBP14.57□□□□□ -0.08
PTP4A1-201ENST00000370651 TFF3Q07654 80 aa14.57□□□□□ -0.08
PTP4A1-201ENST00000370651 SMIM12Q96EX1 92 aa14.57□□□□□ -0.08
PTP4A1-201ENST00000370651 SNRNP200O75643 2136 aaKnown RBP14.57□□□□□ -0.08
PTP4A1-201ENST00000370651 SH2D7A6NKC9 451 aaPredicted RBP14.57□□□□□ -0.08
PTP4A1-201ENST00000370651 ZNF146Q15072 292 aa14.57□□□□□ -0.08
PTP4A1-201ENST00000370651 LEAP2Q969E1 77 aa14.57□□□□□ -0.08
PTP4A1-201ENST00000370651 TMEM208Q9BTX3 173 aa14.57□□□□□ -0.08
PTP4A1-201ENST00000370651 KIF26BQ2KJY2 2108 aa14.57□□□□□ -0.08
PTP4A1-201ENST00000370651 COLCA2A8K830 154 aa14.57□□□□□ -0.08
PTP4A1-201ENST00000370651 SLC25A17O43808 307 aa14.57□□□□□ -0.08
PTP4A1-201ENST00000370651 RBPMS2Q6ZRY4 209 aaKnown RBP14.56□□□□□ -0.08
PTP4A1-201ENST00000370651 WDR31Q8NA23 367 aa14.56□□□□□ -0.08
PTP4A1-201ENST00000370651 OR4A5Q8NH83 315 aa14.56□□□□□ -0.08
PTP4A1-201ENST00000370651 C18orf12Q96KH6 178 aa14.56□□□□□ -0.08
PTP4A1-201ENST00000370651 DNLZQ5SXM8 178 aa14.56□□□□□ -0.08
PTP4A1-201ENST00000370651 PAQR4Q8N4S7 273 aaPredicted RBP14.56□□□□□ -0.08
PTP4A1-201ENST00000370651 OR1N2Q8NGR9 330 aa14.56□□□□□ -0.08
PTP4A1-201ENST00000370651 C14orf144Q96I85 54 aa14.56□□□□□ -0.08
PTP4A1-201ENST00000370651 LOC107984156A0A0G2JMH3 177 aa14.56□□□□□ -0.08
PTP4A1-201ENST00000370651 PROB1E7EW31 1015 aa14.56□□□□□ -0.08
PTP4A1-201ENST00000370651 CD5P06127 495 aa14.56□□□□□ -0.08
PTP4A1-201ENST00000370651 ATP5G3P48201 142 aa14.56□□□□□ -0.08
PTP4A1-201ENST00000370651 HBBP68871 147 aa14.56□□□□□ -0.08
PTP4A1-201ENST00000370651 ARL17AQ8IVW1 177 aa14.56□□□□□ -0.08
PTP4A1-201ENST00000370651 CCDC144NLQ6NUI1 221 aa14.56□□□□□ -0.08
PTP4A1-201ENST00000370651 PMCHL2Q9BQD1 86 aa14.56□□□□□ -0.08
PTP4A1-201ENST00000370651 OPN3Q9H1Y3 402 aaPredicted RBP14.56□□□□□ -0.08
PTP4A1-201ENST00000370651 MAP1LC3AQ9H492 121 aa14.56□□□□□ -0.08
PTP4A1-201ENST00000370651 LIPFP07098 398 aa14.55□□□□□ -0.08
PTP4A1-201ENST00000370651 ATP5IP56385 69 aaPredicted RBP14.55□□□□□ -0.08
PTP4A1-201ENST00000370651 ECSCRQ19T08 205 aa14.55□□□□□ -0.08
PTP4A1-201ENST00000370651 PMS2CLQ68D20 193 aa14.55□□□□□ -0.08
PTP4A1-201ENST00000370651 HEPN1Q6WQI6 88 aa14.55□□□□□ -0.08
PTP4A1-201ENST00000370651 ZNF71Q9NQZ8 489 aaPredicted RBP14.55□□□□□ -0.08
PTP4A1-201ENST00000370651 FOXA3P55318 350 aaPredicted RBP14.55□□□□□ -0.08
PTP4A1-201ENST00000370651 TMEM170AQ8WVE7 144 aa14.55□□□□□ -0.08
PTP4A1-201ENST00000370651 DIRC2Q96SL1 478 aa14.55□□□□□ -0.08
PTP4A1-201ENST00000370651 SCO2A0A1W2PP80 73 aa14.55□□□□□ -0.08
PTP4A1-201ENST00000370651 TMEM78Q5T7P6 136 aa14.55□□□□□ -0.08
PTP4A1-201ENST00000370651 NPIPB3Q92617 1050 aa14.55□□□□□ -0.08
PTP4A1-201ENST00000370651 C12orf77C9JDV5 145 aa14.55□□□□□ -0.08
PTP4A1-201ENST00000370651 CACNA1DQ01668 2161 aa14.55□□□□□ -0.08
PTP4A1-201ENST00000370651 H3BTX0 84 aa14.54□□□□□ -0.08
PTP4A1-201ENST00000370651 CGAP01215 116 aa14.54□□□□□ -0.08
PTP4A1-201ENST00000370651 PCSK4Q6UW60 755 aa14.54□□□□□ -0.08
PTP4A1-201ENST00000370651 PEF1Q9UBV8 284 aaKnown RBP14.54□□□□□ -0.08
PTP4A1-201ENST00000370651 PRR33A8MZF0 331 aa14.54□□□□□ -0.08
PTP4A1-201ENST00000370651 J3QW42 95 aa14.54□□□□□ -0.08
PTP4A1-201ENST00000370651 FOXC1Q12948 553 aa14.54□□□□□ -0.08
PTP4A1-201ENST00000370651 RTN4RQ9BZR6 473 aa14.54□□□□□ -0.08
PTP4A1-201ENST00000370651 IGKV1-9A0A0C4DH69 117 aa14.54□□□□□ -0.08
PTP4A1-201ENST00000370651 A0A1W2PQM1 296 aa14.54□□□□□ -0.08
PTP4A1-201ENST00000370651 C2orf83Q53S99 150 aa14.54□□□□□ -0.08
PTP4A1-201ENST00000370651 FAM89BQ8N5H3 189 aa14.54□□□□□ -0.08
PTP4A1-201ENST00000370651 HIST1H4GQ99525 98 aa14.54□□□□□ -0.08
PTP4A1-201ENST00000370651 MIEN1Q9BRT3 115 aa14.54□□□□□ -0.08
PTP4A1-201ENST00000370651 LINC00470Q9BZP3 86 aa14.54□□□□□ -0.08
PTP4A1-201ENST00000370651 CHCHD2Q9Y6H1 151 aaPredicted RBP14.54□□□□□ -0.08
PTP4A1-201ENST00000370651 ZNF318Q5VUA4 2279 aa14.53□□□□□ -0.08
PTP4A1-201ENST00000370651 TRAV9-1A0A075B6T8 112 aa14.53□□□□□ -0.08
PTP4A1-201ENST00000370651 TIAF1O95411 115 aa14.53□□□□□ -0.08
PTP4A1-201ENST00000370651 GPX4P36969 197 aaPredicted RBP14.53□□□□□ -0.08
PTP4A1-201ENST00000370651 FOXD3Q9UJU5 478 aaPredicted RBP14.53□□□□□ -0.08
PTP4A1-201ENST00000370651 F11RQ9Y624 299 aaKnown RBP14.53□□□□□ -0.08
PTP4A1-201ENST00000370651 C17orf98A8MV24 154 aa14.53□□□□□ -0.08
PTP4A1-201ENST00000370651 ERVFRD-1P60508 538 aa14.53□□□□□ -0.08
PTP4A1-201ENST00000370651 RPS20P60866 119 aaKnown RBP14.53□□□□□ -0.08
PTP4A1-201ENST00000370651 CCL20P78556 96 aa14.53□□□□□ -0.08
PTP4A1-201ENST00000370651 TCF24Q7RTU0 167 aa14.53□□□□□ -0.08
PTP4A1-201ENST00000370651 MRPL13Q9BYD1 178 aaKnown RBP14.53□□□□□ -0.08
PTP4A1-201ENST00000370651 FCGR2BP31994 310 aaPredicted RBP14.53□□□□□ -0.08
PTP4A1-201ENST00000370651 A0A1W2PR77 199 aa14.52□□□□□ -0.08
PTP4A1-201ENST00000370651 SLC25A53Q5H9E4 307 aa14.52□□□□□ -0.08
PTP4A1-201ENST00000370651 ERASQ7Z444 233 aa14.52□□□□□ -0.08
PTP4A1-201ENST00000370651 OR4C13Q8NGP0 309 aa14.52□□□□□ -0.08
PTP4A1-201ENST00000370651 KCNS1Q96KK3 526 aa14.52□□□□□ -0.08
PTP4A1-201ENST00000370651 JOSD1Q15040 202 aaPredicted RBP14.52□□□□□ -0.08
PTP4A1-201ENST00000370651 TNFSF10P50591 281 aa14.52□□□□□ -0.09
PTP4A1-201ENST00000370651 ARF6P62330 175 aa14.52□□□□□ -0.09
PTP4A1-201ENST00000370651 GOLT1AQ6ZVE7 132 aa14.52□□□□□ -0.09
PTP4A1-201ENST00000370651 NYNRINQ9P2P1 1898 aaKnown RBP14.52□□□□□ -0.09
PTP4A1-201ENST00000370651 IGHV3-48P01763 117 aa14.52□□□□□ -0.09
PTP4A1-201ENST00000370651 RPL39P5Q59GN2 51 aa14.52□□□□□ -0.09
PTP4A1-201ENST00000370651 CDCP2Q5VXM1 449 aa14.52□□□□□ -0.09
PTP4A1-201ENST00000370651 FAM117AQ9C073 453 aa14.52□□□□□ -0.09
PTP4A1-201ENST00000370651 CYTL1Q9NRR1 136 aa14.52□□□□□ -0.09
PTP4A1-201ENST00000370651 CHD5Q8TDI0 1954 aa14.52□□□□□ -0.09
PTP4A1-201ENST00000370651 WFDC1Q9HC57 220 aa14.51□□□□□ -0.09
PTP4A1-201ENST00000370651 RABAC1Q9UI14 185 aa14.51□□□□□ -0.09
PTP4A1-201ENST00000370651 PATJQ8NI35 1801 aa14.51□□□□□ -0.09
PTP4A1-201ENST00000370651 RALGAPA2Q2PPJ7 1873 aa14.51□□□□□ -0.09
PTP4A1-201ENST00000370651 TRBV6-7A0A0A0MS04 114 aa14.51□□□□□ -0.09
PTP4A1-201ENST00000370651 WNT9BO14905 357 aa14.51□□□□□ -0.09
PTP4A1-201ENST00000370651 SERF1AO75920 110 aa14.51□□□□□ -0.09
PTP4A1-201ENST00000370651 SAP25Q8TEE9 199 aa14.51□□□□□ -0.09
PTP4A1-201ENST00000370651 SDK2Q58EX2 2172 aa14.51□□□□□ -0.09
PTP4A1-201ENST00000370651 AHRRA9YTQ3 701 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms