RNA–Protein interactions for RNA: ENST00000370576.8

MCF2-203, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MCF2, Length 3,688 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-203ENST00000370576 OR7C1O76099 320 aaPredicted RBP3.13□□□□□ -1.91
MCF2-203ENST00000370576 BLVRBP30043 206 aaPredicted RBP3.13□□□□□ -1.91
MCF2-203ENST00000370576 FABP6P51161 128 aa3.13□□□□□ -1.91
MCF2-203ENST00000370576 HNRNPA3P51991 378 aaKnown RBP3.13□□□□□ -1.91
MCF2-203ENST00000370576 HSPE1P61604 102 aaKnown RBP3.13□□□□□ -1.91
MCF2-203ENST00000370576 ZNF92Q03936 586 aa3.13□□□□□ -1.91
MCF2-203ENST00000370576 UBE2V2Q15819 145 aa3.13□□□□□ -1.91
MCF2-203ENST00000370576 GSG1Q2KHT4 349 aa3.13□□□□□ -1.91
MCF2-203ENST00000370576 GSG1LQ6UXU4 331 aa3.13□□□□□ -1.91
MCF2-203ENST00000370576 CEACAM19Q7Z692 300 aa3.13□□□□□ -1.91
MCF2-203ENST00000370576 MAPKAPK5-AS1Q8N8E1 139 aa3.13□□□□□ -1.91
MCF2-203ENST00000370576 FGGYQ96C11 551 aa3.13□□□□□ -1.91
MCF2-203ENST00000370576 OR51I2Q9H344 312 aa3.13□□□□□ -1.91
MCF2-203ENST00000370576 HEXA-AS1Q9H8Q6 139 aa3.13□□□□□ -1.91
MCF2-203ENST00000370576 GNB4Q9HAV0 340 aa3.13□□□□□ -1.91
MCF2-203ENST00000370576 NRN1Q9NPD7 142 aa3.13□□□□□ -1.91
MCF2-203ENST00000370576 AURKAIP1Q9NWT8 199 aaPredicted RBP3.13□□□□□ -1.91
MCF2-203ENST00000370576 ZFP30Q9Y2G7 519 aa3.13□□□□□ -1.91
MCF2-203ENST00000370576 WDFY4Q6ZS81 3184 aa3.12□□□□□ -1.91
MCF2-203ENST00000370576 ASCC3Q8N3C0 2202 aaKnown RBP3.12□□□□□ -1.91
MCF2-203ENST00000370576 IGHV2OR16-5A0A0B4J2B6 119 aa3.12□□□□□ -1.91
MCF2-203ENST00000370576 M0R1B8 84 aa3.12□□□□□ -1.91
MCF2-203ENST00000370576 SPINT2O43291 252 aa3.12□□□□□ -1.91
MCF2-203ENST00000370576 FREM3P0C091 2139 aa3.12□□□□□ -1.91
MCF2-203ENST00000370576 HIST1H1BP16401 226 aaKnown RBP3.12□□□□□ -1.91
MCF2-203ENST00000370576 IGHV1-2P23083 117 aa3.12□□□□□ -1.91
MCF2-203ENST00000370576 TAS2R20P59543 309 aa3.12□□□□□ -1.91
MCF2-203ENST00000370576 RPL18AQ02543 176 aaKnown RBP3.12□□□□□ -1.91
MCF2-203ENST00000370576 GAGE5Q13069 117 aa3.12□□□□□ -1.91
MCF2-203ENST00000370576 GAGE6Q13070 117 aa3.12□□□□□ -1.91
MCF2-203ENST00000370576 ZNF626Q68DY1 528 aa3.12□□□□□ -1.91
MCF2-203ENST00000370576 LAMTOR1Q6IAA8 161 aa3.12□□□□□ -1.91
MCF2-203ENST00000370576 STEAP1BQ6NZ63 245 aa3.12□□□□□ -1.91
MCF2-203ENST00000370576 ADAMTSL5Q6ZMM2 481 aa3.12□□□□□ -1.91
MCF2-203ENST00000370576 FDCSPQ8NFU4 85 aa3.12□□□□□ -1.91
MCF2-203ENST00000370576 ZNF563Q8TA94 476 aa3.12□□□□□ -1.91
MCF2-203ENST00000370576 MBD6Q96DN6 1003 aa3.12□□□□□ -1.91
MCF2-203ENST00000370576 CHST6Q9GZX3 395 aa3.12□□□□□ -1.91
MCF2-203ENST00000370576 NIT2Q9NQR4 276 aa3.12□□□□□ -1.91
MCF2-203ENST00000370576 SULT2B1O00204 365 aa3.12□□□□□ -1.91
MCF2-203ENST00000370576 MT-CO2P00403 227 aa3.12□□□□□ -1.91
MCF2-203ENST00000370576 IGLV2-14P01704 120 aa3.12□□□□□ -1.91
MCF2-203ENST00000370576 PKIAP61925 76 aa3.12□□□□□ -1.91
MCF2-203ENST00000370576 BAXQ07812 192 aa3.12□□□□□ -1.91
MCF2-203ENST00000370576 GNMTQ14749 295 aa3.12□□□□□ -1.91
MCF2-203ENST00000370576 NNATQ16517 81 aa3.12□□□□□ -1.91
MCF2-203ENST00000370576 DMRTC1Q5HYR2 192 aa3.12□□□□□ -1.91
MCF2-203ENST00000370576 GLYATL3Q5SZD4 288 aa3.12□□□□□ -1.91
MCF2-203ENST00000370576 WDR86Q86TI4 376 aa3.12□□□□□ -1.91
MCF2-203ENST00000370576 C12orf45Q8N5I9 185 aaPredicted RBP3.12□□□□□ -1.91
MCF2-203ENST00000370576 GRPEL2Q8TAA5 225 aa3.12□□□□□ -1.91
MCF2-203ENST00000370576 NARS2Q96I59 477 aaKnown RBP3.12□□□□□ -1.91
MCF2-203ENST00000370576 TBX15Q96SF7 602 aa3.12□□□□□ -1.91
MCF2-203ENST00000370576 RTBDNQ9BSG5 229 aaPredicted RBP3.12□□□□□ -1.91
MCF2-203ENST00000370576 PRRG4Q9BZD6 226 aa3.12□□□□□ -1.91
MCF2-203ENST00000370576 ZNF442Q9H7R0 627 aa3.12□□□□□ -1.91
MCF2-203ENST00000370576 TAS2R8Q9NYW2 309 aa3.12□□□□□ -1.91
MCF2-203ENST00000370576 ZNF222Q9UK12 451 aa3.12□□□□□ -1.91
MCF2-203ENST00000370576 KCNIP3Q9Y2W7 256 aa3.12□□□□□ -1.91
MCF2-203ENST00000370576 WSB1Q9Y6I7 421 aa3.12□□□□□ -1.91
MCF2-203ENST00000370576 F5P12259 2224 aa3.12□□□□□ -1.91
MCF2-203ENST00000370576 IGKV1-12A0A0C4DH73 117 aa3.12□□□□□ -1.91
MCF2-203ENST00000370576 J3QLW9 94 aa3.12□□□□□ -1.91
MCF2-203ENST00000370576 ATP5LO75964 103 aa3.12□□□□□ -1.91
MCF2-203ENST00000370576 CLDN1O95832 211 aa3.12□□□□□ -1.91
MCF2-203ENST00000370576 GPANK1O95872 356 aa3.12□□□□□ -1.91
MCF2-203ENST00000370576 IGKV1D-12P01611 117 aa3.12□□□□□ -1.91
MCF2-203ENST00000370576 SLC25A4P12235 298 aa3.12□□□□□ -1.91
MCF2-203ENST00000370576 SLC25A6P12236 298 aa3.12□□□□□ -1.91
MCF2-203ENST00000370576 ZNF19P17023 458 aa3.12□□□□□ -1.91
MCF2-203ENST00000370576 MDKP21741 143 aaPredicted RBP3.12□□□□□ -1.91
MCF2-203ENST00000370576 AADACL3Q5VUY0 350 aa3.12□□□□□ -1.91
MCF2-203ENST00000370576 SPATA31B1PQ5VZV4 182 aa3.12□□□□□ -1.91
MCF2-203ENST00000370576 PNLDC1Q8NA58 520 aaKnown RBP3.12□□□□□ -1.91
MCF2-203ENST00000370576 DEFB124Q8NES8 71 aa3.12□□□□□ -1.91
MCF2-203ENST00000370576 OR13C8Q8NGS7 320 aa3.12□□□□□ -1.91
MCF2-203ENST00000370576 THEM6Q8WUY1 208 aa3.12□□□□□ -1.91
MCF2-203ENST00000370576 ORAOV1Q8WV07 137 aa3.12□□□□□ -1.91
MCF2-203ENST00000370576 SLC7A6Q92536 515 aa3.12□□□□□ -1.91
MCF2-203ENST00000370576 RNF185Q96GF1 192 aa3.12□□□□□ -1.91
MCF2-203ENST00000370576 RBP7Q96R05 134 aa3.12□□□□□ -1.91
MCF2-203ENST00000370576 DPCDQ9BVM2 203 aaPredicted RBP3.12□□□□□ -1.91
MCF2-203ENST00000370576 KLK11Q9UBX7 282 aa3.12□□□□□ -1.91
MCF2-203ENST00000370576 ZNF629Q9UEG4 869 aaPredicted RBP3.12□□□□□ -1.91
MCF2-203ENST00000370576 MPC1Q9Y5U8 109 aa3.12□□□□□ -1.91
MCF2-203ENST00000370576 LMX1BO60663 402 aa3.11□□□□□ -1.91
MCF2-203ENST00000370576 RLN2P04090 185 aa3.11□□□□□ -1.91
MCF2-203ENST00000370576 GYPBP06028 91 aa3.11□□□□□ -1.91
MCF2-203ENST00000370576 OR8U8P0C7N1 319 aa3.11□□□□□ -1.91
MCF2-203ENST00000370576 PRTN3P24158 256 aa3.11□□□□□ -1.91
MCF2-203ENST00000370576 CDK2P24941 298 aa3.11□□□□□ -1.91
MCF2-203ENST00000370576 SNRPD2P62316 118 aaKnown RBP3.11□□□□□ -1.91
MCF2-203ENST00000370576 HOXA4Q00056 320 aaPredicted RBP3.11□□□□□ -1.91
MCF2-203ENST00000370576 MPV17LQ2QL34 196 aa3.11□□□□□ -1.91
MCF2-203ENST00000370576 HLA-DRB5Q30154 266 aa3.11□□□□□ -1.91
MCF2-203ENST00000370576 TMEM30BQ3MIR4 351 aa3.11□□□□□ -1.91
MCF2-203ENST00000370576 TSPO2Q5TGU0 170 aa3.11□□□□□ -1.91
MCF2-203ENST00000370576 AWAT2Q6E213 333 aa3.11□□□□□ -1.91
MCF2-203ENST00000370576 SPINK14Q6IE38 97 aa3.11□□□□□ -1.91
MCF2-203ENST00000370576 SLC25A42Q86VD7 318 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms