RNA–Protein interactions for RNA: ENST00000369462.5

BRCC3-204, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,846 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-204ENST00000369462 RANBP3Q9H6Z4 567 aaPredicted RBP8.76□□□□□ -1.01
BRCC3-204ENST00000369462 PLXNB1O43157 2135 aa8.75□□□□□ -1.01
BRCC3-204ENST00000369462 TRAV3A0A0B4J244 114 aa8.75□□□□□ -1.01
BRCC3-204ENST00000369462 NCBP2LA6PVI3 153 aaKnown RBP8.75□□□□□ -1.01
BRCC3-204ENST00000369462 CCNKO75909 580 aa8.75□□□□□ -1.01
BRCC3-204ENST00000369462 OR2A4O95047 310 aa8.75□□□□□ -1.01
BRCC3-204ENST00000369462 OR9G9P0C7N8 305 aa8.75□□□□□ -1.01
BRCC3-204ENST00000369462 TRAPPC2P0DI81 140 aa8.75□□□□□ -1.01
BRCC3-204ENST00000369462 TRAPPC2BP0DI82 140 aa8.75□□□□□ -1.01
BRCC3-204ENST00000369462 PSG5Q15238 335 aa8.75□□□□□ -1.01
BRCC3-204ENST00000369462 LY6EQ16553 131 aa8.75□□□□□ -1.01
BRCC3-204ENST00000369462 VMA21Q3ZAQ7 101 aa8.75□□□□□ -1.01
BRCC3-204ENST00000369462 THOC7Q6I9Y2 204 aaKnown RBP8.75□□□□□ -1.01
BRCC3-204ENST00000369462 TMEM219Q86XT9 240 aa8.75□□□□□ -1.01
BRCC3-204ENST00000369462 SVIPQ8NHG7 77 aa8.75□□□□□ -1.01
BRCC3-204ENST00000369462 OR2A7Q96R45 310 aa8.75□□□□□ -1.01
BRCC3-204ENST00000369462 IGHV4-59P01825 116 aa8.75□□□□□ -1.01
BRCC3-204ENST00000369462 UBE2KP61086 200 aa8.75□□□□□ -1.01
BRCC3-204ENST00000369462 Q8N6K4 173 aa8.75□□□□□ -1.01
BRCC3-204ENST00000369462 C2orf50Q96LR7 162 aa8.75□□□□□ -1.01
BRCC3-204ENST00000369462 SPIN2AQ99865 258 aa8.75□□□□□ -1.01
BRCC3-204ENST00000369462 SPIN2BQ9BPZ2 258 aa8.75□□□□□ -1.01
BRCC3-204ENST00000369462 FBXL15Q9H469 300 aa8.75□□□□□ -1.01
BRCC3-204ENST00000369462 TPSG1Q9NRR2 321 aa8.75□□□□□ -1.01
BRCC3-204ENST00000369462 METTL1Q9UBP6 276 aaKnown RBP8.75□□□□□ -1.01
BRCC3-204ENST00000369462 TEP1Q99973 2627 aaKnown RBP8.74□□□□□ -1.01
BRCC3-204ENST00000369462 A0A1B0GU03 582 aa8.74□□□□□ -1.01
BRCC3-204ENST00000369462 NBR2O15453 112 aa8.74□□□□□ -1.01
BRCC3-204ENST00000369462 NXPH3O95157 252 aa8.74□□□□□ -1.01
BRCC3-204ENST00000369462 OR2B8PP59922 312 aa8.74□□□□□ -1.01
BRCC3-204ENST00000369462 SMCO1Q147U7 214 aa8.74□□□□□ -1.01
BRCC3-204ENST00000369462 PLGLAQ15195 96 aa8.74□□□□□ -1.01
BRCC3-204ENST00000369462 AANATQ16613 207 aa8.74□□□□□ -1.01
BRCC3-204ENST00000369462 PUSL1Q8N0Z8 303 aaKnown RBP8.74□□□□□ -1.01
BRCC3-204ENST00000369462 OR4A16Q8NH70 328 aa8.74□□□□□ -1.01
BRCC3-204ENST00000369462 VSTM2AQ8TAG5 236 aa8.74□□□□□ -1.01
BRCC3-204ENST00000369462 RANGRFQ9HD47 186 aaPredicted RBP8.74□□□□□ -1.01
BRCC3-204ENST00000369462 PLSCR3Q9NRY6 295 aa8.74□□□□□ -1.01
BRCC3-204ENST00000369462 BET1LQ9NYM9 111 aa8.74□□□□□ -1.01
BRCC3-204ENST00000369462 KIAA1456Q9P272 454 aa8.74□□□□□ -1.01
BRCC3-204ENST00000369462 CDC42EP3Q9UKI2 254 aa8.74□□□□□ -1.01
BRCC3-204ENST00000369462 INAFM1C9JVW0 142 aa8.74□□□□□ -1.01
BRCC3-204ENST00000369462 RRHO14718 337 aa8.74□□□□□ -1.01
BRCC3-204ENST00000369462 SNAPC5O75971 98 aa8.74□□□□□ -1.01
BRCC3-204ENST00000369462 KBTBD11O94819 623 aa8.74□□□□□ -1.01
BRCC3-204ENST00000369462 IER3P46695 156 aa8.74□□□□□ -1.01
BRCC3-204ENST00000369462 PJVKQ0ZLH3 352 aa8.74□□□□□ -1.01
BRCC3-204ENST00000369462 TM4SF20Q53R12 229 aa8.74□□□□□ -1.01
BRCC3-204ENST00000369462 Q6YL49 198 aa8.74□□□□□ -1.01
BRCC3-204ENST00000369462 AKAP14Q86UN6 197 aa8.74□□□□□ -1.01
BRCC3-204ENST00000369462 ZBTB8BQ8NAP8 495 aaPredicted RBP8.74□□□□□ -1.01
BRCC3-204ENST00000369462 OR1S1Q8NH92 325 aa8.74□□□□□ -1.01
BRCC3-204ENST00000369462 FYTTD1Q96QD9 318 aaKnown RBP8.74□□□□□ -1.01
BRCC3-204ENST00000369462 TNFRSF19Q9NS68 423 aa8.74□□□□□ -1.01
BRCC3-204ENST00000369462 SIGLEC9Q9Y336 463 aa8.74□□□□□ -1.01
BRCC3-204ENST00000369462 FN1P02751 2386 aaKnown RBP8.74□□□□□ -1.01
BRCC3-204ENST00000369462 UPK2O00526 184 aa8.73□□□□□ -1.01
BRCC3-204ENST00000369462 PFDN1O60925 122 aa8.73□□□□□ -1.01
BRCC3-204ENST00000369462 SRD5A1P18405 259 aa8.73□□□□□ -1.01
BRCC3-204ENST00000369462 RELBQ01201 579 aa8.73□□□□□ -1.01
BRCC3-204ENST00000369462 CD300CQ08708 224 aa8.73□□□□□ -1.01
BRCC3-204ENST00000369462 LRRC37A5PQ49AS3 106 aa8.73□□□□□ -1.01
BRCC3-204ENST00000369462 SIGLECL1Q8N7X8 197 aa8.73□□□□□ -1.01
BRCC3-204ENST00000369462 TEX45Q8NA69 505 aa8.73□□□□□ -1.01
BRCC3-204ENST00000369462 NPBQ8NG41 125 aa8.73□□□□□ -1.01
BRCC3-204ENST00000369462 CLCC1Q96S66 551 aa8.73□□□□□ -1.01
BRCC3-204ENST00000369462 NEURL2Q9BR09 285 aa8.73□□□□□ -1.01
BRCC3-204ENST00000369462 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.73□□□□□ -1.01
BRCC3-204ENST00000369462 TCF19Q9Y242 345 aa8.73□□□□□ -1.01
BRCC3-204ENST00000369462 SPDEFO95238 335 aa8.73□□□□□ -1.01
BRCC3-204ENST00000369462 IL6RP08887 468 aaPredicted RBP8.73□□□□□ -1.01
BRCC3-204ENST00000369462 SLC25A6P12236 298 aa8.73□□□□□ -1.01
BRCC3-204ENST00000369462 CYCSP99999 105 aaKnown RBP8.73□□□□□ -1.01
BRCC3-204ENST00000369462 CXorf66Q5JRM2 361 aaPredicted RBP8.73□□□□□ -1.01
BRCC3-204ENST00000369462 PPP1R27Q86WC6 154 aa8.73□□□□□ -1.01
BRCC3-204ENST00000369462 TMEM167AQ8TBQ9 72 aa8.73□□□□□ -1.01
BRCC3-204ENST00000369462 ST6GAL2Q96JF0 529 aa8.73□□□□□ -1.01
BRCC3-204ENST00000369462 SLC25A33Q9BSK2 321 aa8.73□□□□□ -1.01
BRCC3-204ENST00000369462 PRDM13Q9H4Q3 707 aa8.73□□□□□ -1.01
BRCC3-204ENST00000369462 ZNF430Q9H8G1 570 aaPredicted RBP8.73□□□□□ -1.01
BRCC3-204ENST00000369462 C1RLQ9NZP8 487 aa8.73□□□□□ -1.01
BRCC3-204ENST00000369462 PITPNC1Q9UKF7 332 aa8.73□□□□□ -1.01
BRCC3-204ENST00000369462 CUBNO60494 3623 aa8.73□□□□□ -1.01
BRCC3-204ENST00000369462 HOXA3O43365 443 aaPredicted RBP8.72□□□□□ -1.01
BRCC3-204ENST00000369462 PITX3O75364 302 aa8.72□□□□□ -1.01
BRCC3-204ENST00000369462 NDUFA3O95167 84 aa8.72□□□□□ -1.01
BRCC3-204ENST00000369462 GIPP09681 153 aaPredicted RBP8.72□□□□□ -1.01
BRCC3-204ENST00000369462 RPL8P62917 257 aaKnown RBP8.72□□□□□ -1.01
BRCC3-204ENST00000369462 C5orf64Q2M2E5 130 aa8.72□□□□□ -1.01
BRCC3-204ENST00000369462 FOXRED2Q8IWF2 684 aa8.72□□□□□ -1.01
BRCC3-204ENST00000369462 PPP1R1CQ8WVI7 109 aa8.72□□□□□ -1.01
BRCC3-204ENST00000369462 SSMEM1Q8WWF3 244 aa8.72□□□□□ -1.01
BRCC3-204ENST00000369462 NMES1Q9C002 83 aa8.72□□□□□ -1.01
BRCC3-204ENST00000369462 COA4Q9NYJ1 87 aa8.72□□□□□ -1.01
BRCC3-204ENST00000369462 NF1P21359 2839 aa8.72□□□□□ -1.01
BRCC3-204ENST00000369462 NIPBLQ6KC79 2804 aaeCLIP8.72□□□□□ -1.017e-6■□□□□ 10.5
BRCC3-204ENST00000369462 A6NDX4 124 aa8.72□□□□□ -1.01
BRCC3-204ENST00000369462 BTBD17A6NE02 478 aa8.72□□□□□ -1.01
BRCC3-204ENST00000369462 FCN1O00602 326 aa8.72□□□□□ -1.01
BRCC3-204ENST00000369462 OPN1MWP04001 364 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms