RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 COMPP49747 757 aaPredicted RBP7.13□□□□□ -1.27
TPM3-213ENST00000368545 IL15RAQ13261 267 aa7.13□□□□□ -1.27
TPM3-213ENST00000368545 SMCO1Q147U7 214 aa7.13□□□□□ -1.27
TPM3-213ENST00000368545 LTC4SQ16873 150 aa7.13□□□□□ -1.27
TPM3-213ENST00000368545 Q3ZCU0 254 aa7.13□□□□□ -1.27
TPM3-213ENST00000368545 LYPD2Q6UXB3 125 aa7.13□□□□□ -1.27
TPM3-213ENST00000368545 LYZL2Q7Z4W2 148 aa7.13□□□□□ -1.27
TPM3-213ENST00000368545 ZNF546Q86UE3 836 aa7.13□□□□□ -1.27
TPM3-213ENST00000368545 CIARTQ8N365 385 aaPredicted RBP7.13□□□□□ -1.27
TPM3-213ENST00000368545 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.13□□□□□ -1.27
TPM3-213ENST00000368545 OCC1Q8TAD7 63 aa7.13□□□□□ -1.27
TPM3-213ENST00000368545 LHFPL5Q8TAF8 219 aa7.13□□□□□ -1.27
TPM3-213ENST00000368545 H1FXQ92522 213 aaKnown RBP7.13□□□□□ -1.27
TPM3-213ENST00000368545 ZNF714Q96N38 554 aa7.13□□□□□ -1.27
TPM3-213ENST00000368545 HSD17B10Q99714 261 aaKnown RBP7.13□□□□□ -1.27
TPM3-213ENST00000368545 AGMATQ9BSE5 352 aa7.13□□□□□ -1.27
TPM3-213ENST00000368545 TM2D2Q9BX73 214 aa7.13□□□□□ -1.27
TPM3-213ENST00000368545 MIOXQ9UGB7 285 aa7.13□□□□□ -1.27
TPM3-213ENST00000368545 PAIP2BQ9ULR5 123 aaKnown RBP7.13□□□□□ -1.27
TPM3-213ENST00000368545 PSG11Q9UQ72 335 aa7.13□□□□□ -1.27
TPM3-213ENST00000368545 GAB2Q9UQC2 676 aa7.13□□□□□ -1.27
TPM3-213ENST00000368545 HIVEP2P31629 2446 aa7.13□□□□□ -1.27
TPM3-213ENST00000368545 FBN1P35555 2871 aaKnown RBP7.12□□□□□ -1.27
TPM3-213ENST00000368545 ZFHX3Q15911 3703 aa7.12□□□□□ -1.27
TPM3-213ENST00000368545 VCYO14598 125 aa7.12□□□□□ -1.27
TPM3-213ENST00000368545 GPR12P47775 334 aa7.12□□□□□ -1.27
TPM3-213ENST00000368545 KRTAP1-1Q07627 177 aa7.12□□□□□ -1.27
TPM3-213ENST00000368545 EIF4EBP1Q13541 118 aaPredicted RBP7.12□□□□□ -1.27
TPM3-213ENST00000368545 PRSS54Q6PEW0 395 aa7.12□□□□□ -1.27
TPM3-213ENST00000368545 HEPN1Q6WQI6 88 aa7.12□□□□□ -1.27
TPM3-213ENST00000368545 SELENOHQ8IZQ5 122 aaKnown RBP7.12□□□□□ -1.27
TPM3-213ENST00000368545 RNF183Q96D59 192 aa7.12□□□□□ -1.27
TPM3-213ENST00000368545 HARBI1Q96MB7 349 aa7.12□□□□□ -1.27
TPM3-213ENST00000368545 C19orf12Q9NSK7 152 aa7.12□□□□□ -1.27
TPM3-213ENST00000368545 RPUSD1Q9UJJ7 312 aaKnown RBP7.12□□□□□ -1.27
TPM3-213ENST00000368545 TNFSF18Q9UNG2 199 aa7.12□□□□□ -1.27
TPM3-213ENST00000368545 DOCK11Q5JSL3 2073 aa7.12□□□□□ -1.27
TPM3-213ENST00000368545 NIPBLQ6KC79 2804 aaeCLIP7.12□□□□□ -1.27
TPM3-213ENST00000368545 A0A0D9SG52 128 aa7.12□□□□□ -1.27
TPM3-213ENST00000368545 MEX3AA1L020 520 aaKnown RBP7.12□□□□□ -1.27
TPM3-213ENST00000368545 ATG12O94817 140 aa7.12□□□□□ -1.27
TPM3-213ENST00000368545 OR2F2O95006 317 aa7.12□□□□□ -1.27
TPM3-213ENST00000368545 RLN2P04090 185 aa7.12□□□□□ -1.27
TPM3-213ENST00000368545 SLC25A6P12236 298 aa7.12□□□□□ -1.27
TPM3-213ENST00000368545 OMGP23515 440 aa7.12□□□□□ -1.27
TPM3-213ENST00000368545 S100A11P31949 105 aa7.12□□□□□ -1.27
TPM3-213ENST00000368545 TMEM33P57088 247 aa7.12□□□□□ -1.27
TPM3-213ENST00000368545 IFITM2Q01629 132 aa7.12□□□□□ -1.27
TPM3-213ENST00000368545 OR2F1Q13607 317 aa7.12□□□□□ -1.27
TPM3-213ENST00000368545 THOC7Q6I9Y2 204 aaKnown RBP7.12□□□□□ -1.27
TPM3-213ENST00000368545 INO80EQ8NBZ0 244 aaPredicted RBP7.12□□□□□ -1.27
TPM3-213ENST00000368545 OR8B3Q8NGG8 313 aa7.12□□□□□ -1.27
TPM3-213ENST00000368545 CD300LFQ8TDQ1 290 aa7.12□□□□□ -1.27
TPM3-213ENST00000368545 ABHD14BQ96IU4 210 aa7.12□□□□□ -1.27
TPM3-213ENST00000368545 OR8B2Q96RD0 313 aa7.12□□□□□ -1.27
TPM3-213ENST00000368545 MFFQ9GZY8 342 aa7.12□□□□□ -1.27
TPM3-213ENST00000368545 SDHAF2Q9NX18 166 aa7.12□□□□□ -1.27
TPM3-213ENST00000368545 GSKIPQ9P0R6 139 aa7.12□□□□□ -1.27
TPM3-213ENST00000368545 MBD2Q9UBB5 411 aa7.12□□□□□ -1.27
TPM3-213ENST00000368545 RNF150Q9ULK6 438 aa7.12□□□□□ -1.27
TPM3-213ENST00000368545 YLPM1P49750 1951 aaKnown RBP7.12□□□□□ -1.27
TPM3-213ENST00000368545 LYNX1G3V0Z9 82 aa7.11□□□□□ -1.27
TPM3-213ENST00000368545 PPIHO43447 177 aaKnown RBP7.11□□□□□ -1.27
TPM3-213ENST00000368545 FCN3O75636 299 aa7.11□□□□□ -1.27
TPM3-213ENST00000368545 LYNX1P0DP58 116 aa7.11□□□□□ -1.27
TPM3-213ENST00000368545 CXCL2P19875 107 aa7.11□□□□□ -1.27
TPM3-213ENST00000368545 NUP62P37198 522 aaPredicted RBP7.11□□□□□ -1.27
TPM3-213ENST00000368545 SCGB2A2Q13296 93 aa7.11□□□□□ -1.27
TPM3-213ENST00000368545 NMSQ5H8A3 153 aa7.11□□□□□ -1.27
TPM3-213ENST00000368545 PQLC2Q6ZP29 291 aa7.11□□□□□ -1.27
TPM3-213ENST00000368545 ACOT7LQ6ZUV0 252 aa7.11□□□□□ -1.27
TPM3-213ENST00000368545 FGFRL1Q8N441 504 aa7.11□□□□□ -1.27
TPM3-213ENST00000368545 TCTEX1D2Q8WW35 142 aa7.11□□□□□ -1.27
TPM3-213ENST00000368545 DCUN1D4Q92564 292 aa7.11□□□□□ -1.27
TPM3-213ENST00000368545 LSM10Q969L4 123 aaKnown RBP7.11□□□□□ -1.27
TPM3-213ENST00000368545 PCGF1Q9BSM1 259 aa7.11□□□□□ -1.27
TPM3-213ENST00000368545 ARL6Q9H0F7 186 aa7.11□□□□□ -1.27
TPM3-213ENST00000368545 IFI27L2Q9H2X8 130 aa7.11□□□□□ -1.27
TPM3-213ENST00000368545 HRNRQ86YZ3 2850 aaPredicted RBP7.11□□□□□ -1.27
TPM3-213ENST00000368545 RAB29O14966 203 aa7.1□□□□□ -1.27
TPM3-213ENST00000368545 DEDDO75618 318 aa7.1□□□□□ -1.27
TPM3-213ENST00000368545 TSPAN15O95858 294 aa7.1□□□□□ -1.27
TPM3-213ENST00000368545 NFYBP25208 207 aa7.1□□□□□ -1.27
TPM3-213ENST00000368545 CDKN1AP38936 164 aa7.1□□□□□ -1.27
TPM3-213ENST00000368545 KIR2DS2P43631 304 aa7.1□□□□□ -1.27
TPM3-213ENST00000368545 EFNA4P52798 201 aa7.1□□□□□ -1.27
TPM3-213ENST00000368545 DSCR9P59020 149 aa7.1□□□□□ -1.27
TPM3-213ENST00000368545 S100A10P60903 97 aa7.1□□□□□ -1.27
TPM3-213ENST00000368545 OPCMLQ14982 345 aa7.1□□□□□ -1.27
TPM3-213ENST00000368545 PRAMEF5Q5TYX0 476 aa7.1□□□□□ -1.27
TPM3-213ENST00000368545 FAM219AQ8IW50 185 aa7.1□□□□□ -1.27
TPM3-213ENST00000368545 ZNF439Q8NDP4 499 aa7.1□□□□□ -1.27
TPM3-213ENST00000368545 OR4D5Q8NGN0 318 aa7.1□□□□□ -1.27
TPM3-213ENST00000368545 RNASE11Q8TAA1 199 aaKnown RBP7.1□□□□□ -1.27
TPM3-213ENST00000368545 WIPF2Q8TF74 440 aaPredicted RBP7.1□□□□□ -1.27
TPM3-213ENST00000368545 DAZAP1Q96EP5 407 aaKnown RBP7.1□□□□□ -1.27
TPM3-213ENST00000368545 A0A1B0GU03 582 aa7.1□□□□□ -1.27
TPM3-213ENST00000368545 ST8SIA3O43173 380 aa7.1□□□□□ -1.27
TPM3-213ENST00000368545 TSC22D2O75157 780 aa7.1□□□□□ -1.27
TPM3-213ENST00000368545 RBP4P02753 201 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms