RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 HRASP01112 189 aa14.56□□□□□ -0.08
CKS1B-203ENST00000368439 HLA-DMAP28067 261 aa14.56□□□□□ -0.08
CKS1B-203ENST00000368439 INSL3P51460 131 aa14.56□□□□□ -0.08
CKS1B-203ENST00000368439 CATR1Q13166 79 aa14.56□□□□□ -0.08
CKS1B-203ENST00000368439 SPCS2Q15005 226 aa14.56□□□□□ -0.08
CKS1B-203ENST00000368439 POU2AF1Q16633 256 aa14.56□□□□□ -0.08
CKS1B-203ENST00000368439 ZNF343Q6P1L6 599 aa14.56□□□□□ -0.08
CKS1B-203ENST00000368439 MZT2AQ6P582 158 aa14.56□□□□□ -0.08
CKS1B-203ENST00000368439 AP3S1Q92572 193 aa14.56□□□□□ -0.08
CKS1B-203ENST00000368439 SPIN2AQ99865 258 aa14.56□□□□□ -0.08
CKS1B-203ENST00000368439 SPIN2BQ9BPZ2 258 aa14.56□□□□□ -0.08
CKS1B-203ENST00000368439 BET1LQ9NYM9 111 aa14.56□□□□□ -0.08
CKS1B-203ENST00000368439 TRBV9A0A0B4J1U6 114 aa14.55□□□□□ -0.08
CKS1B-203ENST00000368439 PGLYRP1O75594 196 aaPredicted RBP14.55□□□□□ -0.08
CKS1B-203ENST00000368439 ACTL6BO94805 426 aa14.55□□□□□ -0.08
CKS1B-203ENST00000368439 HPRT1P00492 218 aa14.55□□□□□ -0.08
CKS1B-203ENST00000368439 PRH1P02810 166 aa14.55□□□□□ -0.08
CKS1B-203ENST00000368439 ZNF735P0CB33 412 aa14.55□□□□□ -0.08
CKS1B-203ENST00000368439 MAS1LP35410 378 aa14.55□□□□□ -0.08
CKS1B-203ENST00000368439 TAS2R31P59538 309 aa14.55□□□□□ -0.08
CKS1B-203ENST00000368439 DEFB121Q5J5C9 76 aa14.55□□□□□ -0.08
CKS1B-203ENST00000368439 OR4A47Q6IF82 309 aa14.55□□□□□ -0.08
CKS1B-203ENST00000368439 ACSM6Q6P461 480 aa14.55□□□□□ -0.08
CKS1B-203ENST00000368439 SSX9Q7RTT3 188 aa14.55□□□□□ -0.08
CKS1B-203ENST00000368439 OR51H1Q8NH63 302 aa14.55□□□□□ -0.08
CKS1B-203ENST00000368439 USMG5Q96IX5 58 aa14.55□□□□□ -0.08
CKS1B-203ENST00000368439 RANGRFQ9HD47 186 aaPredicted RBP14.55□□□□□ -0.08
CKS1B-203ENST00000368439 HMX3A6NHT5 357 aa14.54□□□□□ -0.08
CKS1B-203ENST00000368439 CGB1A6NKQ9 187 aa14.54□□□□□ -0.08
CKS1B-203ENST00000368439 MPPED1O15442 326 aa14.54□□□□□ -0.08
CKS1B-203ENST00000368439 MYOD1P15172 320 aa14.54□□□□□ -0.08
CKS1B-203ENST00000368439 RCVRNP35243 200 aa14.54□□□□□ -0.08
CKS1B-203ENST00000368439 ECI1P42126 302 aa14.54□□□□□ -0.08
CKS1B-203ENST00000368439 RPL27AP46776 148 aaKnown RBP14.54□□□□□ -0.08
CKS1B-203ENST00000368439 AADACL3Q5VUY0 350 aa14.54□□□□□ -0.08
CKS1B-203ENST00000368439 ZNF429Q86V71 674 aa14.54□□□□□ -0.08
CKS1B-203ENST00000368439 OR6F1Q8NGZ6 308 aa14.54□□□□□ -0.08
CKS1B-203ENST00000368439 OR4A5Q8NH83 315 aa14.54□□□□□ -0.08
CKS1B-203ENST00000368439 BORCS5Q969J3 196 aa14.54□□□□□ -0.08
CKS1B-203ENST00000368439 PRR25Q96S07 402 aa14.54□□□□□ -0.08
CKS1B-203ENST00000368439 MIXL1Q9H2W2 232 aa14.54□□□□□ -0.08
CKS1B-203ENST00000368439 AKIP1Q9NQ31 210 aa14.54□□□□□ -0.08
CKS1B-203ENST00000368439 LSM4Q9Y4Z0 139 aaKnown RBP14.54□□□□□ -0.08
CKS1B-203ENST00000368439 TRAV3A0A0B4J244 114 aa14.53□□□□□ -0.08
CKS1B-203ENST00000368439 ANKRD34BA5PLL1 514 aa14.53□□□□□ -0.08
CKS1B-203ENST00000368439 FAM25AB3EWG3 89 aa14.53□□□□□ -0.08
CKS1B-203ENST00000368439 FAM25CB3EWG5 89 aa14.53□□□□□ -0.08
CKS1B-203ENST00000368439 FAM25GB3EWG6 89 aa14.53□□□□□ -0.08
CKS1B-203ENST00000368439 S1PR2O95136 353 aa14.53□□□□□ -0.08
CKS1B-203ENST00000368439 TRBV12-3P01733 135 aa14.53□□□□□ -0.08
CKS1B-203ENST00000368439 RPL8P62917 257 aaKnown RBP14.53□□□□□ -0.08
CKS1B-203ENST00000368439 PLEKHA2Q9HB19 425 aa14.53□□□□□ -0.08
CKS1B-203ENST00000368439 SLC2A9Q9NRM0 540 aa14.53□□□□□ -0.08
CKS1B-203ENST00000368439 EXTL2Q9UBQ6 330 aa14.53□□□□□ -0.08
CKS1B-203ENST00000368439 SAP30O75446 220 aa14.52□□□□□ -0.09
CKS1B-203ENST00000368439 TPPPO94811 219 aa14.52□□□□□ -0.09
CKS1B-203ENST00000368439 RLN1P04808 185 aa14.52□□□□□ -0.09
CKS1B-203ENST00000368439 NQO2P16083 231 aa14.52□□□□□ -0.09
CKS1B-203ENST00000368439 HLA-GP17693 338 aa14.52□□□□□ -0.09
CKS1B-203ENST00000368439 RHOGP84095 191 aa14.52□□□□□ -0.09
CKS1B-203ENST00000368439 KLF5Q13887 457 aaPredicted RBP14.52□□□□□ -0.09
CKS1B-203ENST00000368439 KLK9Q2XQG4 91 aa14.52□□□□□ -0.09
CKS1B-203ENST00000368439 C19orf35Q6ZS72 473 aa14.52□□□□□ -0.09
CKS1B-203ENST00000368439 CLVS1Q8IUQ0 354 aaPredicted RBP14.52□□□□□ -0.09
CKS1B-203ENST00000368439 CD300LFQ8TDQ1 290 aa14.52□□□□□ -0.09
CKS1B-203ENST00000368439 ABHD1Q96SE0 405 aa14.52□□□□□ -0.09
CKS1B-203ENST00000368439 AIFM2Q9BRQ8 373 aa14.52□□□□□ -0.09
CKS1B-203ENST00000368439 PEF1Q9UBV8 284 aaKnown RBP14.52□□□□□ -0.09
CKS1B-203ENST00000368439 KLK11Q9UBX7 282 aa14.52□□□□□ -0.09
CKS1B-203ENST00000368439 KLK9Q9UKQ9 250 aa14.52□□□□□ -0.09
CKS1B-203ENST00000368439 ZNF256Q9Y2P7 627 aaPredicted RBP14.52□□□□□ -0.09
CKS1B-203ENST00000368439 FAM223BA6NKX1 122 aa14.51□□□□□ -0.09
CKS1B-203ENST00000368439 NPIPB5A8MRT5 1133 aa14.51□□□□□ -0.09
CKS1B-203ENST00000368439 GPR31O00270 319 aa14.51□□□□□ -0.09
CKS1B-203ENST00000368439 UPK2O00526 184 aa14.51□□□□□ -0.09
CKS1B-203ENST00000368439 CRYGCP07315 174 aa14.51□□□□□ -0.09
CKS1B-203ENST00000368439 AREGP15514 252 aa14.51□□□□□ -0.09
CKS1B-203ENST00000368439 ZP3P21754 424 aa14.51□□□□□ -0.09
CKS1B-203ENST00000368439 F2RP25116 425 aa14.51□□□□□ -0.09
CKS1B-203ENST00000368439 ZNF585BQ52M93 769 aa14.51□□□□□ -0.09
CKS1B-203ENST00000368439 VAX1Q5SQQ9 334 aa14.51□□□□□ -0.09
CKS1B-203ENST00000368439 FAM223AQ8IWN6 122 aa14.51□□□□□ -0.09
CKS1B-203ENST00000368439 OR52I2Q8NH67 350 aa14.51□□□□□ -0.09
CKS1B-203ENST00000368439 FYTTD1Q96QD9 318 aaKnown RBP14.51□□□□□ -0.09
CKS1B-203ENST00000368439 COMMD9Q9P000 198 aa14.51□□□□□ -0.09
CKS1B-203ENST00000368439 ZNF257Q9Y2Q1 563 aa14.51□□□□□ -0.09
CKS1B-203ENST00000368439 CTDSP2O14595 271 aa14.5□□□□□ -0.09
CKS1B-203ENST00000368439 FGF2P09038 288 aa14.5□□□□□ -0.09
CKS1B-203ENST00000368439 TMBIM6P55061 237 aa14.5□□□□□ -0.09
CKS1B-203ENST00000368439 OR2B8PP59922 312 aa14.5□□□□□ -0.09
CKS1B-203ENST00000368439 TSPAN5P62079 268 aa14.5□□□□□ -0.09
CKS1B-203ENST00000368439 RNASE12Q5GAN4 147 aaKnown RBP14.5□□□□□ -0.09
CKS1B-203ENST00000368439 IL34Q6ZMJ4 242 aa14.5□□□□□ -0.09
CKS1B-203ENST00000368439 SLC25A42Q86VD7 318 aa14.5□□□□□ -0.09
CKS1B-203ENST00000368439 NECAP1Q8NC96 275 aa14.5□□□□□ -0.09
CKS1B-203ENST00000368439 DYNC2LI1Q8TCX1 351 aa14.5□□□□□ -0.09
CKS1B-203ENST00000368439 RAB2BQ8WUD1 216 aa14.5□□□□□ -0.09
CKS1B-203ENST00000368439 DGCR14Q96DF8 476 aaKnown RBP14.5□□□□□ -0.09
CKS1B-203ENST00000368439 FANCD2OSQ96PS1 177 aa14.5□□□□□ -0.09
CKS1B-203ENST00000368439 B9D2Q9BPU9 175 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms