RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 OR4S2Q8NH73 311 aa12.08□□□□□ -0.48
CKS1B-202ENST00000368436 VSTM2AQ8TAG5 236 aa12.08□□□□□ -0.48
CKS1B-202ENST00000368436 RETNQ9HD89 108 aa12.08□□□□□ -0.48
CKS1B-202ENST00000368436 ZC4H2Q9NQZ6 224 aa12.08□□□□□ -0.48
CKS1B-202ENST00000368436 SLC2A9Q9NRM0 540 aa12.08□□□□□ -0.48
CKS1B-202ENST00000368436 SLC2A8Q9NY64 477 aa12.08□□□□□ -0.48
CKS1B-202ENST00000368436 KLK9Q9UKQ9 250 aa12.08□□□□□ -0.48
CKS1B-202ENST00000368436 EPPK1P58107 5090 aaKnown RBP12.08□□□□□ -0.48
CKS1B-202ENST00000368436 A0A1B0GW64 132 aa12.07□□□□□ -0.48
CKS1B-202ENST00000368436 RBMY1BA6NDE4 496 aaKnown RBP12.07□□□□□ -0.48
CKS1B-202ENST00000368436 RBMY1EA6NEQ0 496 aaKnown RBP12.07□□□□□ -0.48
CKS1B-202ENST00000368436 SSX5O60225 188 aa12.07□□□□□ -0.48
CKS1B-202ENST00000368436 MRPS14O60783 128 aaKnown RBP12.07□□□□□ -0.48
CKS1B-202ENST00000368436 CRYGCP07315 174 aa12.07□□□□□ -0.48
CKS1B-202ENST00000368436 RBMY1DP0C7P1 496 aaKnown RBP12.07□□□□□ -0.48
CKS1B-202ENST00000368436 ZNF735P0CB33 412 aa12.07□□□□□ -0.48
CKS1B-202ENST00000368436 FOLR2P14207 255 aa12.07□□□□□ -0.48
CKS1B-202ENST00000368436 EDN2P20800 178 aa12.07□□□□□ -0.48
CKS1B-202ENST00000368436 MAS1LP35410 378 aa12.07□□□□□ -0.48
CKS1B-202ENST00000368436 RPL27AP46776 148 aaKnown RBP12.07□□□□□ -0.48
CKS1B-202ENST00000368436 UBE2UQ5VVX9 321 aa12.07□□□□□ -0.48
CKS1B-202ENST00000368436 IZUMO2Q6UXV1 221 aa12.07□□□□□ -0.48
CKS1B-202ENST00000368436 GPHB5Q86YW7 130 aa12.07□□□□□ -0.48
CKS1B-202ENST00000368436 DYNLRB2Q8TF09 96 aa12.07□□□□□ -0.48
CKS1B-202ENST00000368436 NUDCD2Q8WVJ2 157 aa12.07□□□□□ -0.48
CKS1B-202ENST00000368436 FANCD2OSQ96PS1 177 aa12.07□□□□□ -0.48
CKS1B-202ENST00000368436 TXNL4BQ9NX01 149 aaKnown RBP12.07□□□□□ -0.48
CKS1B-202ENST00000368436 TECRQ9NZ01 308 aaKnown RBP12.07□□□□□ -0.48
CKS1B-202ENST00000368436 ANXA10Q9UJ72 324 aa12.07□□□□□ -0.48
CKS1B-202ENST00000368436 FBXL7Q9UJT9 491 aa12.07□□□□□ -0.48
CKS1B-202ENST00000368436 TMEM235A6NFC5 223 aa12.06□□□□□ -0.48
CKS1B-202ENST00000368436 SCGNO76038 276 aa12.06□□□□□ -0.48
CKS1B-202ENST00000368436 NDUFB8O95169 186 aa12.06□□□□□ -0.48
CKS1B-202ENST00000368436 OR2C1O95371 312 aa12.06□□□□□ -0.48
CKS1B-202ENST00000368436 HLA-AP01891 365 aaKnown RBP12.06□□□□□ -0.48
CKS1B-202ENST00000368436 GABARAPL2P60520 117 aa12.06□□□□□ -0.48
CKS1B-202ENST00000368436 ZNF66Q6ZN08 573 aa12.06□□□□□ -0.48
CKS1B-202ENST00000368436 C19orf35Q6ZS72 473 aa12.06□□□□□ -0.48
CKS1B-202ENST00000368436 TPRA1Q86W33 373 aa12.06□□□□□ -0.48
CKS1B-202ENST00000368436 MFSD4AQ8N468 514 aa12.06□□□□□ -0.48
CKS1B-202ENST00000368436 DEFB125Q8N687 156 aa12.06□□□□□ -0.48
CKS1B-202ENST00000368436 IL17DQ8TAD2 202 aa12.06□□□□□ -0.48
CKS1B-202ENST00000368436 TCTEX1D2Q8WW35 142 aa12.06□□□□□ -0.48
CKS1B-202ENST00000368436 FYTTD1Q96QD9 318 aaKnown RBP12.06□□□□□ -0.48
CKS1B-202ENST00000368436 SPATA2Q9UM82 520 aa12.06□□□□□ -0.48
CKS1B-202ENST00000368436 DPPA5A6NC42 116 aa12.05□□□□□ -0.48
CKS1B-202ENST00000368436 OR11H12B2RN74 326 aa12.05□□□□□ -0.48
CKS1B-202ENST00000368436 CBLN1P23435 193 aa12.05□□□□□ -0.48
CKS1B-202ENST00000368436 PSMB6P28072 239 aa12.05□□□□□ -0.48
CKS1B-202ENST00000368436 GNG2P59768 71 aa12.05□□□□□ -0.48
CKS1B-202ENST00000368436 MSMO1Q15800 293 aa12.05□□□□□ -0.48
CKS1B-202ENST00000368436 CCDC140Q96MF4 163 aa12.05□□□□□ -0.48
CKS1B-202ENST00000368436 FAM110AQ9BQ89 295 aa12.05□□□□□ -0.48
CKS1B-202ENST00000368436 WFDC10AQ9H1F0 79 aa12.05□□□□□ -0.48
CKS1B-202ENST00000368436 DAPK2Q9UIK4 370 aa12.05□□□□□ -0.48
CKS1B-202ENST00000368436 RAB26Q9ULW5 256 aa12.05□□□□□ -0.48
CKS1B-202ENST00000368436 HRASP01112 189 aa12.04□□□□□ -0.48
CKS1B-202ENST00000368436 AREGP15514 252 aa12.04□□□□□ -0.48
CKS1B-202ENST00000368436 CTRB1P17538 263 aa12.04□□□□□ -0.48
CKS1B-202ENST00000368436 GUCA2BQ16661 112 aa12.04□□□□□ -0.48
CKS1B-202ENST00000368436 CTRB2Q6GPI1 263 aa12.04□□□□□ -0.48
CKS1B-202ENST00000368436 WDR89Q96FK6 387 aaPredicted RBP12.04□□□□□ -0.48
CKS1B-202ENST00000368436 GPHA2Q96T91 129 aa12.04□□□□□ -0.48
CKS1B-202ENST00000368436 SRD5A3Q9H8P0 318 aa12.04□□□□□ -0.48
CKS1B-202ENST00000368436 TAS2R8Q9NYW2 309 aa12.04□□□□□ -0.48
CKS1B-202ENST00000368436 CGB1A6NKQ9 187 aa12.03□□□□□ -0.48
CKS1B-202ENST00000368436 A8MWP6 167 aa12.03□□□□□ -0.48
CKS1B-202ENST00000368436 DHFRP00374 187 aa12.03□□□□□ -0.48
CKS1B-202ENST00000368436 IGHV3-23P01764 117 aa12.03□□□□□ -0.48
CKS1B-202ENST00000368436 HIST1H1BP16401 226 aaKnown RBP12.03□□□□□ -0.48
CKS1B-202ENST00000368436 ARL3P36405 182 aa12.03□□□□□ -0.48
CKS1B-202ENST00000368436 RPL8P62917 257 aaKnown RBP12.03□□□□□ -0.48
CKS1B-202ENST00000368436 SFXN4Q6P4A7 337 aa12.03□□□□□ -0.48
CKS1B-202ENST00000368436 CLEC19AQ6UXS0 136 aa12.03□□□□□ -0.48
CKS1B-202ENST00000368436 SPARTQ8N0X7 666 aa12.03□□□□□ -0.48
CKS1B-202ENST00000368436 LGALS14Q8TCE9 139 aa12.03□□□□□ -0.48
CKS1B-202ENST00000368436 CCL28Q9NRJ3 127 aa12.03□□□□□ -0.48
CKS1B-202ENST00000368436 BET1LQ9NYM9 111 aa12.03□□□□□ -0.48
CKS1B-202ENST00000368436 RRP15Q9Y3B9 282 aaKnown RBP12.03□□□□□ -0.48
CKS1B-202ENST00000368436 TMEM213A2RRL7 107 aa12.02□□□□□ -0.49
CKS1B-202ENST00000368436 MYOD1P15172 320 aa12.02□□□□□ -0.49
CKS1B-202ENST00000368436 HLA-GP17693 338 aa12.02□□□□□ -0.49
CKS1B-202ENST00000368436 FAM106AQ4KMX7 169 aa12.02□□□□□ -0.49
CKS1B-202ENST00000368436 SSX9Q7RTT3 188 aa12.02□□□□□ -0.49
CKS1B-202ENST00000368436 ZBTB34Q8NCN2 500 aa12.02□□□□□ -0.49
CKS1B-202ENST00000368436 OR4A5Q8NH83 315 aa12.02□□□□□ -0.49
CKS1B-202ENST00000368436 CACNG8Q8WXS5 425 aa12.02□□□□□ -0.49
CKS1B-202ENST00000368436 EEF1AKMT3Q96AZ1 226 aa12.02□□□□□ -0.49
CKS1B-202ENST00000368436 AIFM2Q9BRQ8 373 aa12.02□□□□□ -0.49
CKS1B-202ENST00000368436 RHBDL2Q9NX52 303 aa12.02□□□□□ -0.49
CKS1B-202ENST00000368436 SSR3Q9UNL2 185 aa12.02□□□□□ -0.49
CKS1B-202ENST00000368436 S4R3C0 116 aa12.02□□□□□ -0.49
CKS1B-202ENST00000368436 HYDINQ4G0P3 5121 aa12.02□□□□□ -0.49
CKS1B-202ENST00000368436 BIRC6Q9NR09 4857 aa12.02□□□□□ -0.49
CKS1B-202ENST00000368436 IGLV11-55A0A075B6I3 123 aa12.01□□□□□ -0.49
CKS1B-202ENST00000368436 RBFOX2O43251 390 aaKnown RBP eCLIP12.01□□□□□ -0.49
CKS1B-202ENST00000368436 JTBO76095 146 aa12.01□□□□□ -0.49
CKS1B-202ENST00000368436 PSMB9P28065 219 aa12.01□□□□□ -0.49
CKS1B-202ENST00000368436 FCGR2CP31995 323 aa12.01□□□□□ -0.49
CKS1B-202ENST00000368436 SCAND1P57086 179 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms