RNA–Protein interactions for RNA: ENST00000368226.8

PTPRK-207, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRK, Length 6,087 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-207ENST00000368226 LAIR2Q6ISS4 152 aa10.92□□□□□ -0.66
PTPRK-207ENST00000368226 C11orf44Q8N8P7 122 aa10.92□□□□□ -0.66
PTPRK-207ENST00000368226 ALX4Q9H161 411 aaPredicted RBP10.92□□□□□ -0.66
PTPRK-207ENST00000368226 TUBD1Q9UJT1 453 aa10.92□□□□□ -0.66
PTPRK-207ENST00000368226 C7orf66A4D0T2 115 aa10.92□□□□□ -0.66
PTPRK-207ENST00000368226 TMEM14DPA8MWL7 114 aa10.92□□□□□ -0.66
PTPRK-207ENST00000368226 CCL3L1P16619 93 aa10.92□□□□□ -0.66
PTPRK-207ENST00000368226 GOLT1AQ6ZVE7 132 aa10.92□□□□□ -0.66
PTPRK-207ENST00000368226 SPRR3Q9UBC9 169 aa10.92□□□□□ -0.66
PTPRK-207ENST00000368226 NPPCP23582 126 aa10.92□□□□□ -0.66
PTPRK-207ENST00000368226 C2orf83Q53S99 150 aa10.92□□□□□ -0.66
PTPRK-207ENST00000368226 FADS6Q8N9I5 356 aa10.92□□□□□ -0.66
PTPRK-207ENST00000368226 RAB24Q969Q5 203 aa10.92□□□□□ -0.66
PTPRK-207ENST00000368226 FOXA2Q9Y261 457 aaPredicted RBP10.92□□□□□ -0.66
PTPRK-207ENST00000368226 SHISA3A0PJX4 238 aa10.92□□□□□ -0.66
PTPRK-207ENST00000368226 C9JCJ5 164 aa10.92□□□□□ -0.66
PTPRK-207ENST00000368226 KLF7O75840 302 aaPredicted RBP10.92□□□□□ -0.66
PTPRK-207ENST00000368226 KBTBD11O94819 623 aa10.92□□□□□ -0.66
PTPRK-207ENST00000368226 CD74P04233 296 aa10.92□□□□□ -0.66
PTPRK-207ENST00000368226 LHX2P50458 406 aa10.92□□□□□ -0.66
PTPRK-207ENST00000368226 ZNF383Q8NA42 475 aa10.92□□□□□ -0.66
PTPRK-207ENST00000368226 TBX6O95947 436 aaPredicted RBP10.91□□□□□ -0.66
PTPRK-207ENST00000368226 RNASE1P07998 156 aaKnown RBP10.91□□□□□ -0.66
PTPRK-207ENST00000368226 RELQ04864 619 aaPredicted RBP10.91□□□□□ -0.66
PTPRK-207ENST00000368226 UNQ9370/PRO34162Q6UXP9 181 aa10.91□□□□□ -0.66
PTPRK-207ENST00000368226 LINC00305Q7Z4B0 112 aa10.91□□□□□ -0.66
PTPRK-207ENST00000368226 STPG3Q8N7X2 389 aa10.91□□□□□ -0.66
PTPRK-207ENST00000368226 FBLIM1Q8WUP2 373 aa10.91□□□□□ -0.66
PTPRK-207ENST00000368226 WFIKKN1Q96NZ8 548 aa10.91□□□□□ -0.66
PTPRK-207ENST00000368226 SLC25A33Q9BSK2 321 aa10.91□□□□□ -0.66
PTPRK-207ENST00000368226 ZNF56Q15929 161 aa10.91□□□□□ -0.66
PTPRK-207ENST00000368226 EMP1P54849 157 aa10.91□□□□□ -0.66
PTPRK-207ENST00000368226 SRSF6Q13247 344 aaKnown RBP10.91□□□□□ -0.66
PTPRK-207ENST00000368226 HERPUD1Q15011 391 aa10.91□□□□□ -0.66
PTPRK-207ENST00000368226 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.91□□□□□ -0.66
PTPRK-207ENST00000368226 IFITM10A6NMD0 228 aa10.91□□□□□ -0.66
PTPRK-207ENST00000368226 C17orf98A8MV24 154 aa10.91□□□□□ -0.66
PTPRK-207ENST00000368226 KIAA1644Q3SXP7 199 aa10.91□□□□□ -0.66
PTPRK-207ENST00000368226 ITLN2Q8WWU7 325 aaPredicted RBP10.91□□□□□ -0.66
PTPRK-207ENST00000368226 MRPL20Q9BYC9 149 aaKnown RBP10.91□□□□□ -0.66
PTPRK-207ENST00000368226 SCN5AQ14524 2016 aa10.91□□□□□ -0.66
PTPRK-207ENST00000368226 CACNA1IQ9P0X4 2223 aa10.91□□□□□ -0.66
PTPRK-207ENST00000368226 TGIF2-C20orf24A0A0A6YYL0 155 aa10.91□□□□□ -0.66
PTPRK-207ENST00000368226 SELENOTP62341 195 aa10.91□□□□□ -0.66
PTPRK-207ENST00000368226 CD200R1LQ6Q8B3 271 aa10.91□□□□□ -0.66
PTPRK-207ENST00000368226 NABP2Q9BQ15 211 aa10.91□□□□□ -0.66
PTPRK-207ENST00000368226 BET1LQ9NYM9 111 aa10.91□□□□□ -0.66
PTPRK-207ENST00000368226 ZNF236Q9UL36 1845 aa10.9□□□□□ -0.66
PTPRK-207ENST00000368226 CD59P13987 128 aa10.9□□□□□ -0.66
PTPRK-207ENST00000368226 ZNF660Q6AZW8 331 aaPredicted RBP10.9□□□□□ -0.66
PTPRK-207ENST00000368226 A8MWL6 223 aa10.9□□□□□ -0.66
PTPRK-207ENST00000368226 NUDT3O95989 172 aa10.9□□□□□ -0.66
PTPRK-207ENST00000368226 GPR183P32249 361 aa10.9□□□□□ -0.66
PTPRK-207ENST00000368226 MEF2BQ02080 365 aaPredicted RBP10.9□□□□□ -0.66
PTPRK-207ENST00000368226 CFHR1Q03591 330 aa10.9□□□□□ -0.66
PTPRK-207ENST00000368226 MBNL2Q5VZF2 373 aaKnown RBP10.9□□□□□ -0.66
PTPRK-207ENST00000368226 NRIP2Q9BQI9 281 aa10.9□□□□□ -0.66
PTPRK-207ENST00000368226 LTBP1Q14766 1721 aa10.9□□□□□ -0.66
PTPRK-207ENST00000368226 ACAA1P09110 424 aaPredicted RBP10.9□□□□□ -0.66
PTPRK-207ENST00000368226 CLEC19AQ6UXS0 136 aa10.9□□□□□ -0.66
PTPRK-207ENST00000368226 ELOA3CA0A087WX78 387 aaPredicted RBP10.9□□□□□ -0.67
PTPRK-207ENST00000368226 C8orf88P0DMB2 117 aa10.9□□□□□ -0.67
PTPRK-207ENST00000368226 UQCRFS1P47985 274 aa10.9□□□□□ -0.67
PTPRK-207ENST00000368226 DNM1P46Q6ZS02 220 aa10.9□□□□□ -0.67
PTPRK-207ENST00000368226 ZMAT5Q9UDW3 170 aaKnown RBP10.9□□□□□ -0.67
PTPRK-207ENST00000368226 CHD5Q8TDI0 1954 aa10.89□□□□□ -0.67
PTPRK-207ENST00000368226 IFI6P09912 130 aa10.89□□□□□ -0.67
PTPRK-207ENST00000368226 MEOX2P50222 304 aa10.89□□□□□ -0.67
PTPRK-207ENST00000368226 RPL24P83731 157 aaKnown RBP10.89□□□□□ -0.67
PTPRK-207ENST00000368226 TUBA4BQ9H853 241 aa10.89□□□□□ -0.67
PTPRK-207ENST00000368226 ANKRD36A6QL64 1941 aa10.89□□□□□ -0.67
PTPRK-207ENST00000368226 DIRC3C9JPN6 131 aa10.89□□□□□ -0.67
PTPRK-207ENST00000368226 CFDP00746 253 aaPredicted RBP10.89□□□□□ -0.67
PTPRK-207ENST00000368226 TRGC2P03986 189 aa10.89□□□□□ -0.67
PTPRK-207ENST00000368226 PSG9Q00887 426 aa10.89□□□□□ -0.67
PTPRK-207ENST00000368226 FOXF2Q12947 444 aa10.89□□□□□ -0.67
PTPRK-207ENST00000368226 PRSS8Q16651 343 aa10.89□□□□□ -0.67
PTPRK-207ENST00000368226 DMRTA2Q96SC8 542 aa10.89□□□□□ -0.67
PTPRK-207ENST00000368226 MIEN1Q9BRT3 115 aa10.89□□□□□ -0.67
PTPRK-207ENST00000368226 MPDU1O75352 247 aa10.89□□□□□ -0.67
PTPRK-207ENST00000368226 CD99P14209 185 aa10.89□□□□□ -0.67
PTPRK-207ENST00000368226 ZNF146Q15072 292 aa10.89□□□□□ -0.67
PTPRK-207ENST00000368226 OR51G1Q8NGK1 321 aa10.89□□□□□ -0.67
PTPRK-207ENST00000368226 FBXL7Q9UJT9 491 aa10.89□□□□□ -0.67
PTPRK-207ENST00000368226 ZNF646O15015 1829 aaPredicted RBP10.89□□□□□ -0.67
PTPRK-207ENST00000368226 TMEM262E9PQX1 116 aa10.89□□□□□ -0.67
PTPRK-207ENST00000368226 DLX6P56179 175 aa10.89□□□□□ -0.67
PTPRK-207ENST00000368226 ICE1Q9Y2F5 2266 aa10.89□□□□□ -0.67
PTPRK-207ENST00000368226 FAM74A7A6NL05 159 aa10.89□□□□□ -0.67
PTPRK-207ENST00000368226 TFF3Q07654 80 aa10.89□□□□□ -0.67
PTPRK-207ENST00000368226 C1QTNF12Q5T7M4 302 aa10.89□□□□□ -0.67
PTPRK-207ENST00000368226 ELOVL1Q9BW60 279 aa10.89□□□□□ -0.67
PTPRK-207ENST00000368226 CHRNA10Q9GZZ6 450 aa10.89□□□□□ -0.67
PTPRK-207ENST00000368226 FOXD3Q9UJU5 478 aaPredicted RBP10.89□□□□□ -0.67
PTPRK-207ENST00000368226 ZNF25P17030 456 aaPredicted RBP10.88□□□□□ -0.67
PTPRK-207ENST00000368226 GATA2P23769 480 aaPredicted RBP10.88□□□□□ -0.67
PTPRK-207ENST00000368226 FLVCR1-AS1Q8TAF5 88 aa10.88□□□□□ -0.67
PTPRK-207ENST00000368226 LOC285556D6RIA3 1793 aa10.88□□□□□ -0.67
PTPRK-207ENST00000368226 STPG2Q8N412 459 aa10.88□□□□□ -0.67
PTPRK-207ENST00000368226 TRAV30A0A087WSZ9 112 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms