RNA–Protein interactions for RNA: ENST00000368010.3

PFDN2-201, Transcript of prefoldin subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN2, Length 677 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN2-201ENST00000368010 C10orf55Q5SWW7 151 aa18.49■□□□□ 0.55
PFDN2-201ENST00000368010 SSX9Q7RTT3 188 aa18.49■□□□□ 0.55
PFDN2-201ENST00000368010 CD300LFQ8TDQ1 290 aa18.49■□□□□ 0.55
PFDN2-201ENST00000368010 FXYD6Q9H0Q3 95 aa18.49■□□□□ 0.55
PFDN2-201ENST00000368010 TPPPO94811 219 aa18.48■□□□□ 0.55
PFDN2-201ENST00000368010 HPRT1P00492 218 aa18.48■□□□□ 0.55
PFDN2-201ENST00000368010 HSPB1P04792 205 aaKnown RBP18.48■□□□□ 0.55
PFDN2-201ENST00000368010 CMTM1Q8IZ96 169 aa18.48■□□□□ 0.55
PFDN2-201ENST00000368010 ADAD2Q8NCV1 583 aaKnown RBP18.48■□□□□ 0.55
PFDN2-201ENST00000368010 C15orf40Q8WUR7 153 aa18.48■□□□□ 0.55
PFDN2-201ENST00000368010 DCUN1D4Q92564 292 aa18.48■□□□□ 0.55
PFDN2-201ENST00000368010 OVOL1O14753 267 aa18.47■□□□□ 0.55
PFDN2-201ENST00000368010 RGS5O15539 181 aa18.47■□□□□ 0.55
PFDN2-201ENST00000368010 NOL3O60936 208 aaKnown RBP18.47■□□□□ 0.55
PFDN2-201ENST00000368010 RLN1P04808 185 aa18.47■□□□□ 0.55
PFDN2-201ENST00000368010 MAS1LP35410 378 aa18.47■□□□□ 0.55
PFDN2-201ENST00000368010 SLURP1P55000 103 aa18.47■□□□□ 0.55
PFDN2-201ENST00000368010 TAS2R31P59538 309 aa18.47■□□□□ 0.55
PFDN2-201ENST00000368010 DGCR2P98153 550 aa18.47■□□□□ 0.55
PFDN2-201ENST00000368010 RNASE12Q5GAN4 147 aaKnown RBP18.47■□□□□ 0.55
PFDN2-201ENST00000368010 OR4A5Q8NH83 315 aa18.47■□□□□ 0.55
PFDN2-201ENST00000368010 BET1LQ9NYM9 111 aa18.47■□□□□ 0.55
PFDN2-201ENST00000368010 K7EIL1 84 aa18.46■□□□□ 0.55
PFDN2-201ENST00000368010 PGLYRP1O75594 196 aaPredicted RBP18.46■□□□□ 0.55
PFDN2-201ENST00000368010 NQO2P16083 231 aa18.46■□□□□ 0.55
PFDN2-201ENST00000368010 RPL27AP46776 148 aaKnown RBP18.46■□□□□ 0.55
PFDN2-201ENST00000368010 VAX1Q5SQQ9 334 aa18.46■□□□□ 0.55
PFDN2-201ENST00000368010 OR4A47Q6IF82 309 aa18.46■□□□□ 0.55
PFDN2-201ENST00000368010 DLX4Q92988 240 aaPredicted RBP18.46■□□□□ 0.55
PFDN2-201ENST00000368010 MIXL1Q9H2W2 232 aa18.46■□□□□ 0.55
PFDN2-201ENST00000368010 PLEKHA2Q9HB19 425 aa18.46■□□□□ 0.55
PFDN2-201ENST00000368010 HRASLSQ9HDD0 168 aa18.46■□□□□ 0.55
PFDN2-201ENST00000368010 DNAH3Q8TD57 4116 aa18.46■□□□□ 0.55
PFDN2-201ENST00000368010 WI2-2373I1.2A0A1W2PRP0 233 aa18.45■□□□□ 0.54
PFDN2-201ENST00000368010 GPR31O00270 319 aa18.45■□□□□ 0.54
PFDN2-201ENST00000368010 INSL3P51460 131 aa18.45■□□□□ 0.54
PFDN2-201ENST00000368010 RPL8P62917 257 aaKnown RBP18.45■□□□□ 0.54
PFDN2-201ENST00000368010 LPCAT3Q6P1A2 487 aa18.45■□□□□ 0.54
PFDN2-201ENST00000368010 SLC25A42Q86VD7 318 aa18.45■□□□□ 0.54
PFDN2-201ENST00000368010 OR52I2Q8NH67 350 aa18.45■□□□□ 0.54
PFDN2-201ENST00000368010 USMG5Q96IX5 58 aa18.45■□□□□ 0.54
PFDN2-201ENST00000368010 RANGRFQ9HD47 186 aaPredicted RBP18.45■□□□□ 0.54
PFDN2-201ENST00000368010 COMMD9Q9P000 198 aa18.45■□□□□ 0.54
PFDN2-201ENST00000368010 CCDC59Q9P031 241 aaKnown RBP18.45■□□□□ 0.54
PFDN2-201ENST00000368010 KLK11Q9UBX7 282 aa18.45■□□□□ 0.54
PFDN2-201ENST00000368010 TNCP24821 2201 aa18.44■□□□□ 0.54
PFDN2-201ENST00000368010 CTDSP2O14595 271 aa18.44■□□□□ 0.54
PFDN2-201ENST00000368010 S1PR2O95136 353 aa18.44■□□□□ 0.54
PFDN2-201ENST00000368010 HLA-GP17693 338 aa18.44■□□□□ 0.54
PFDN2-201ENST00000368010 F2RP25116 425 aa18.44■□□□□ 0.54
PFDN2-201ENST00000368010 DEFA5Q01523 94 aa18.44■□□□□ 0.54
PFDN2-201ENST00000368010 POU2AF1Q16633 256 aa18.44■□□□□ 0.54
PFDN2-201ENST00000368010 LAX1Q8IWV1 398 aa18.44■□□□□ 0.54
PFDN2-201ENST00000368010 TTC9CQ8N5M4 171 aa18.44■□□□□ 0.54
PFDN2-201ENST00000368010 DYNC2LI1Q8TCX1 351 aa18.44■□□□□ 0.54
PFDN2-201ENST00000368010 FYTTD1Q96QD9 318 aaKnown RBP18.44■□□□□ 0.54
PFDN2-201ENST00000368010 ABHD1Q96SE0 405 aa18.44■□□□□ 0.54
PFDN2-201ENST00000368010 SCOCQ9UIL1 159 aa18.44■□□□□ 0.54
PFDN2-201ENST00000368010 HMX3A6NHT5 357 aa18.43■□□□□ 0.54
PFDN2-201ENST00000368010 TEX22C9J3V5 150 aa18.43■□□□□ 0.54
PFDN2-201ENST00000368010 M0QYG6 137 aa18.43■□□□□ 0.54
PFDN2-201ENST00000368010 S100GP29377 79 aa18.43■□□□□ 0.54
PFDN2-201ENST00000368010 RNASE10Q5GAN6 216 aaKnown RBP18.43■□□□□ 0.54
PFDN2-201ENST00000368010 DMBX1Q8NFW5 382 aa18.43■□□□□ 0.54
PFDN2-201ENST00000368010 MTFP1Q9UDX5 166 aa18.43■□□□□ 0.54
PFDN2-201ENST00000368010 ANKRD34BA5PLL1 514 aa18.42■□□□□ 0.54
PFDN2-201ENST00000368010 DPPA5A6NC42 116 aa18.42■□□□□ 0.54
PFDN2-201ENST00000368010 FAM223BA6NKX1 122 aa18.42■□□□□ 0.54
PFDN2-201ENST00000368010 IFNA6P05013 189 aa18.42■□□□□ 0.54
PFDN2-201ENST00000368010 IL6RP08887 468 aaPredicted RBP18.42■□□□□ 0.54
PFDN2-201ENST00000368010 ZNF735P0CB33 412 aa18.42■□□□□ 0.54
PFDN2-201ENST00000368010 ZP3P21754 424 aa18.42■□□□□ 0.54
PFDN2-201ENST00000368010 ERVK-16P61578 105 aa18.42■□□□□ 0.54
PFDN2-201ENST00000368010 RHOGP84095 191 aa18.42■□□□□ 0.54
PFDN2-201ENST00000368010 PHLDA2Q53GA4 152 aa18.42■□□□□ 0.54
PFDN2-201ENST00000368010 FAM223AQ8IWN6 122 aa18.42■□□□□ 0.54
PFDN2-201ENST00000368010 FCAMRQ8WWV6 532 aa18.42■□□□□ 0.54
PFDN2-201ENST00000368010 DGCR14Q96DF8 476 aaKnown RBP18.42■□□□□ 0.54
PFDN2-201ENST00000368010 TMEM140Q9NV12 185 aa18.42■□□□□ 0.54
PFDN2-201ENST00000368010 ZNF257Q9Y2Q1 563 aa18.42■□□□□ 0.54
PFDN2-201ENST00000368010 UPK2O00526 184 aa18.41■□□□□ 0.54
PFDN2-201ENST00000368010 PRH1P02810 166 aa18.41■□□□□ 0.54
PFDN2-201ENST00000368010 TBPP20226 339 aa18.41■□□□□ 0.54
PFDN2-201ENST00000368010 ECI1P42126 302 aa18.41■□□□□ 0.54
PFDN2-201ENST00000368010 UCP3P55916 312 aa18.41■□□□□ 0.54
PFDN2-201ENST00000368010 ZNF343Q6P1L6 599 aa18.41■□□□□ 0.54
PFDN2-201ENST00000368010 ZNF429Q86V71 674 aa18.41■□□□□ 0.54
PFDN2-201ENST00000368010 SLC38A6Q8IZM9 456 aa18.41■□□□□ 0.54
PFDN2-201ENST00000368010 ISOC1Q96CN7 298 aa18.41■□□□□ 0.54
PFDN2-201ENST00000368010 RSRP1Q9BUV0 290 aa18.41■□□□□ 0.54
PFDN2-201ENST00000368010 AKIP1Q9NQ31 210 aa18.41■□□□□ 0.54
PFDN2-201ENST00000368010 SLC2A9Q9NRM0 540 aa18.41■□□□□ 0.54
PFDN2-201ENST00000368010 TGP01266 2768 aa18.4■□□□□ 0.54
PFDN2-201ENST00000368010 NPIPB5A8MRT5 1133 aa18.4■□□□□ 0.54
PFDN2-201ENST00000368010 E7EUB6 86 aa18.4■□□□□ 0.54
PFDN2-201ENST00000368010 H3BMQ9 156 aa18.4■□□□□ 0.54
PFDN2-201ENST00000368010 SAP30O75446 220 aa18.4■□□□□ 0.54
PFDN2-201ENST00000368010 RBMXL2O75526 392 aaKnown RBP18.4■□□□□ 0.54
PFDN2-201ENST00000368010 MRPS10P82664 201 aaKnown RBP18.4■□□□□ 0.54
PFDN2-201ENST00000368010 ZNF45Q02386 682 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms