RNA–Protein interactions for RNA: ENST00000367569.3

SF3B5-201, Transcript of splicing factor 3b subunit 5, humanhuman

APPRIS P1 BASIC

Gene SF3B5, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B5-201ENST00000367569 P2RX4Q99571 388 aa11.37□□□□□ -0.59
SF3B5-201ENST00000367569 RSL24D1Q9UHA3 163 aaKnown RBP11.37□□□□□ -0.59
SF3B5-201ENST00000367569 COL7A1Q02388 2944 aa11.37□□□□□ -0.59
SF3B5-201ENST00000367569 GPR31O00270 319 aa11.36□□□□□ -0.59
SF3B5-201ENST00000367569 RBMXL2O75526 392 aaKnown RBP11.36□□□□□ -0.59
SF3B5-201ENST00000367569 PGLYRP1O75594 196 aaPredicted RBP11.36□□□□□ -0.59
SF3B5-201ENST00000367569 OR2A4O95047 310 aa11.36□□□□□ -0.59
SF3B5-201ENST00000367569 PGAM2P15259 253 aa11.36□□□□□ -0.59
SF3B5-201ENST00000367569 KIR2DS2P43631 304 aa11.36□□□□□ -0.59
SF3B5-201ENST00000367569 TMEM267Q0VDI3 215 aaPredicted RBP11.36□□□□□ -0.59
SF3B5-201ENST00000367569 MSMO1Q15800 293 aa11.36□□□□□ -0.59
SF3B5-201ENST00000367569 SCGB2B2Q4G0G5 96 aa11.36□□□□□ -0.59
SF3B5-201ENST00000367569 PUSL1Q8N0Z8 303 aaKnown RBP11.36□□□□□ -0.59
SF3B5-201ENST00000367569 ZBTB34Q8NCN2 500 aa11.36□□□□□ -0.59
SF3B5-201ENST00000367569 OR11H1Q8NG94 326 aa11.36□□□□□ -0.59
SF3B5-201ENST00000367569 SMIM4Q8WVI0 70 aa11.36□□□□□ -0.59
SF3B5-201ENST00000367569 OR2A7Q96R45 310 aa11.36□□□□□ -0.59
SF3B5-201ENST00000367569 HRASLSQ9HDD0 168 aa11.36□□□□□ -0.59
SF3B5-201ENST00000367569 VSIG4Q9Y279 399 aa11.36□□□□□ -0.59
SF3B5-201ENST00000367569 IGHV4OR15-8A0A075B7B6 117 aa11.35□□□□□ -0.59
SF3B5-201ENST00000367569 A0A087WW49 117 aa11.35□□□□□ -0.59
SF3B5-201ENST00000367569 A0A1B0GW64 132 aa11.35□□□□□ -0.59
SF3B5-201ENST00000367569 WI2-2373I1.2A0A1W2PRP0 233 aa11.35□□□□□ -0.59
SF3B5-201ENST00000367569 E7EUB6 86 aa11.35□□□□□ -0.59
SF3B5-201ENST00000367569 GABARAPH6UMI1 98 aa11.35□□□□□ -0.59
SF3B5-201ENST00000367569 I3L521 148 aa11.35□□□□□ -0.59
SF3B5-201ENST00000367569 ACTL6BO94805 426 aa11.35□□□□□ -0.59
SF3B5-201ENST00000367569 IFNA6P05013 189 aa11.35□□□□□ -0.59
SF3B5-201ENST00000367569 REG1AP05451 166 aa11.35□□□□□ -0.59
SF3B5-201ENST00000367569 TNFSF8P32971 234 aa11.35□□□□□ -0.59
SF3B5-201ENST00000367569 MYCNOSP40205 109 aa11.35□□□□□ -0.59
SF3B5-201ENST00000367569 SLURP1P55000 103 aa11.35□□□□□ -0.59
SF3B5-201ENST00000367569 AKIRIN2Q53H80 203 aa11.35□□□□□ -0.59
SF3B5-201ENST00000367569 VAX1Q5SQQ9 334 aa11.35□□□□□ -0.59
SF3B5-201ENST00000367569 PYHIN1Q6K0P9 492 aa11.35□□□□□ -0.59
SF3B5-201ENST00000367569 TBC1D26Q86UD7 250 aa11.35□□□□□ -0.59
SF3B5-201ENST00000367569 MMD2Q8IY49 270 aa11.35□□□□□ -0.59
SF3B5-201ENST00000367569 TCTEX1D1Q8N7M0 179 aa11.35□□□□□ -0.59
SF3B5-201ENST00000367569 DMBX1Q8NFW5 382 aa11.35□□□□□ -0.59
SF3B5-201ENST00000367569 OR5M8Q8NGP6 311 aa11.35□□□□□ -0.59
SF3B5-201ENST00000367569 TMEM167AQ8TBQ9 72 aa11.35□□□□□ -0.59
SF3B5-201ENST00000367569 UBE2E2Q96LR5 201 aa11.35□□□□□ -0.59
SF3B5-201ENST00000367569 TMEM140Q9NV12 185 aa11.35□□□□□ -0.59
SF3B5-201ENST00000367569 ANKRD34BA5PLL1 514 aa11.34□□□□□ -0.59
SF3B5-201ENST00000367569 RAB3DO95716 219 aa11.34□□□□□ -0.59
SF3B5-201ENST00000367569 LPAR6P43657 344 aa11.34□□□□□ -0.59
SF3B5-201ENST00000367569 RPL27AP46776 148 aaKnown RBP11.34□□□□□ -0.59
SF3B5-201ENST00000367569 TAS2R19P59542 299 aa11.34□□□□□ -0.59
SF3B5-201ENST00000367569 OR2B8PP59922 312 aa11.34□□□□□ -0.59
SF3B5-201ENST00000367569 STEAP1BQ6NZ63 245 aa11.34□□□□□ -0.59
SF3B5-201ENST00000367569 CMTM1Q8IZ96 169 aa11.34□□□□□ -0.59
SF3B5-201ENST00000367569 OR4C16Q8NGL9 310 aa11.34□□□□□ -0.59
SF3B5-201ENST00000367569 OR1N2Q8NGR9 330 aa11.34□□□□□ -0.59
SF3B5-201ENST00000367569 RSRP1Q9BUV0 290 aa11.34□□□□□ -0.59
SF3B5-201ENST00000367569 NXF2Q9GZY0 626 aaKnown RBP11.34□□□□□ -0.59
SF3B5-201ENST00000367569 NSG2Q9Y328 171 aa11.34□□□□□ -0.59
SF3B5-201ENST00000367569 TEX22C9J3V5 150 aa11.33□□□□□ -0.6
SF3B5-201ENST00000367569 CREBL2O60519 120 aaPredicted RBP11.33□□□□□ -0.6
SF3B5-201ENST00000367569 DUS4LO95620 317 aaKnown RBP11.33□□□□□ -0.6
SF3B5-201ENST00000367569 HRASP01112 189 aa11.33□□□□□ -0.6
SF3B5-201ENST00000367569 LGALS1P09382 135 aaKnown RBP11.33□□□□□ -0.6
SF3B5-201ENST00000367569 AREGP15514 252 aa11.33□□□□□ -0.6
SF3B5-201ENST00000367569 G6PCP35575 357 aa11.33□□□□□ -0.6
SF3B5-201ENST00000367569 EGFEM1PQ0D2K5 195 aa11.33□□□□□ -0.6
SF3B5-201ENST00000367569 FHL3Q13643 280 aa11.33□□□□□ -0.6
SF3B5-201ENST00000367569 DEFB121Q5J5C9 76 aa11.33□□□□□ -0.6
SF3B5-201ENST00000367569 TMEM229BQ8NBD8 167 aa11.33□□□□□ -0.6
SF3B5-201ENST00000367569 ADAD2Q8NCV1 583 aaKnown RBP11.33□□□□□ -0.6
SF3B5-201ENST00000367569 MARCH1Q8TCQ1 289 aa11.33□□□□□ -0.6
SF3B5-201ENST00000367569 DGCR14Q96DF8 476 aaKnown RBP11.33□□□□□ -0.6
SF3B5-201ENST00000367569 SLC2A9Q9NRM0 540 aa11.33□□□□□ -0.6
SF3B5-201ENST00000367569 S4R3C0 116 aa11.33□□□□□ -0.6
SF3B5-201ENST00000367569 CGB1A6NKQ9 187 aa11.32□□□□□ -0.6
SF3B5-201ENST00000367569 MARCH11A6NNE9 402 aa11.32□□□□□ -0.6
SF3B5-201ENST00000367569 RBFOX2O43251 390 aaKnown RBP eCLIP11.32□□□□□ -0.6
SF3B5-201ENST00000367569 HPRT1P00492 218 aa11.32□□□□□ -0.6
SF3B5-201ENST00000367569 KRASP01116 189 aa11.32□□□□□ -0.6
SF3B5-201ENST00000367569 TRBV12-3P01733 135 aa11.32□□□□□ -0.6
SF3B5-201ENST00000367569 CD74P04233 296 aa11.32□□□□□ -0.6
SF3B5-201ENST00000367569 IL6RP08887 468 aaPredicted RBP11.32□□□□□ -0.6
SF3B5-201ENST00000367569 OR9G9P0C7N8 305 aa11.32□□□□□ -0.6
SF3B5-201ENST00000367569 ZNF735P0CB33 412 aa11.32□□□□□ -0.6
SF3B5-201ENST00000367569 NQO2P16083 231 aa11.32□□□□□ -0.6
SF3B5-201ENST00000367569 HLA-GP17693 338 aa11.32□□□□□ -0.6
SF3B5-201ENST00000367569 F2RP25116 425 aa11.32□□□□□ -0.6
SF3B5-201ENST00000367569 TAS2R31P59538 309 aa11.32□□□□□ -0.6
SF3B5-201ENST00000367569 RPL8P62917 257 aaKnown RBP11.32□□□□□ -0.6
SF3B5-201ENST00000367569 ZNF45Q02386 682 aa11.32□□□□□ -0.6
SF3B5-201ENST00000367569 ZNF616Q08AN1 781 aa11.32□□□□□ -0.6
SF3B5-201ENST00000367569 ZNF585BQ52M93 769 aa11.32□□□□□ -0.6
SF3B5-201ENST00000367569 C11orf87Q6NUJ2 197 aa11.32□□□□□ -0.6
SF3B5-201ENST00000367569 LHFPL1Q86WI0 220 aa11.32□□□□□ -0.6
SF3B5-201ENST00000367569 SLC38A6Q8IZM9 456 aa11.32□□□□□ -0.6
SF3B5-201ENST00000367569 OR13C8Q8NGS7 320 aa11.32□□□□□ -0.6
SF3B5-201ENST00000367569 VSTM2AQ8TAG5 236 aa11.32□□□□□ -0.6
SF3B5-201ENST00000367569 BORCS5Q969J3 196 aa11.32□□□□□ -0.6
SF3B5-201ENST00000367569 MRGPRFQ96AM1 343 aa11.32□□□□□ -0.6
SF3B5-201ENST00000367569 BET1LQ9NYM9 111 aa11.32□□□□□ -0.6
SF3B5-201ENST00000367569 COMMD9Q9P000 198 aa11.32□□□□□ -0.6
SF3B5-201ENST00000367569 V9GYH0 126 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms