RNA–Protein interactions for RNA: ENST00000367253.8

SYNE1-206, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 5,189 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-206ENST00000367253 EPPINO95925 133 aa7.45□□□□□ -1.22
SYNE1-206ENST00000367253 ATRAIDQ6UW56 229 aa7.45□□□□□ -1.22
SYNE1-206ENST00000367253 LRRC75AQ8NAA5 344 aa7.45□□□□□ -1.22
SYNE1-206ENST00000367253 TEX37Q96LM6 180 aa7.45□□□□□ -1.22
SYNE1-206ENST00000367253 RP1P56715 2156 aa7.45□□□□□ -1.22
SYNE1-206ENST00000367253 KLK5Q9Y337 293 aaPredicted RBP7.45□□□□□ -1.22
SYNE1-206ENST00000367253 AHCTF1Q8WYP5 2266 aa7.45□□□□□ -1.22
SYNE1-206ENST00000367253 TTC3P53804 2025 aa7.44□□□□□ -1.22
SYNE1-206ENST00000367253 GHRHP01286 108 aa7.44□□□□□ -1.22
SYNE1-206ENST00000367253 FUT3P21217 361 aa7.44□□□□□ -1.22
SYNE1-206ENST00000367253 P2RY1P47900 373 aa7.44□□□□□ -1.22
SYNE1-206ENST00000367253 C2orf68Q2NKX9 166 aa7.44□□□□□ -1.22
SYNE1-206ENST00000367253 MESTQ5EB52 335 aa7.44□□□□□ -1.22
SYNE1-206ENST00000367253 TCF24Q7RTU0 167 aa7.44□□□□□ -1.22
SYNE1-206ENST00000367253 PDPNQ86YL7 162 aa7.44□□□□□ -1.22
SYNE1-206ENST00000367253 FRRS1LQ9P0K9 344 aa7.44□□□□□ -1.22
SYNE1-206ENST00000367253 HILPDAQ9Y5L2 63 aa7.44□□□□□ -1.22
SYNE1-206ENST00000367253 NAPSAO96009 420 aa7.44□□□□□ -1.22
SYNE1-206ENST00000367253 C1QTNF9P0C862 333 aa7.44□□□□□ -1.22
SYNE1-206ENST00000367253 PRTN3P24158 256 aa7.44□□□□□ -1.22
SYNE1-206ENST00000367253 SSTR5P35346 364 aa7.44□□□□□ -1.22
SYNE1-206ENST00000367253 JOSD1Q15040 202 aaPredicted RBP7.44□□□□□ -1.22
SYNE1-206ENST00000367253 RFLNAQ6ZTI6 216 aa7.44□□□□□ -1.22
SYNE1-206ENST00000367253 RIMKLAQ8IXN7 391 aa7.44□□□□□ -1.22
SYNE1-206ENST00000367253 NAA38Q9BRA0 125 aaKnown RBP7.44□□□□□ -1.22
SYNE1-206ENST00000367253 WNT10AQ9GZT5 417 aa7.44□□□□□ -1.22
SYNE1-206ENST00000367253 ISG20L2Q9H9L3 353 aaKnown RBP7.44□□□□□ -1.22
SYNE1-206ENST00000367253 POLEQ07864 2286 aa7.44□□□□□ -1.22
SYNE1-206ENST00000367253 A0A0U1RQS6 177 aa7.44□□□□□ -1.22
SYNE1-206ENST00000367253 TCRBV5S2A0A599 114 aa7.44□□□□□ -1.22
SYNE1-206ENST00000367253 NPIPB5A8MRT5 1133 aa7.44□□□□□ -1.22
SYNE1-206ENST00000367253 RER1O15258 196 aa7.44□□□□□ -1.22
SYNE1-206ENST00000367253 PSPNO60542 156 aa7.44□□□□□ -1.22
SYNE1-206ENST00000367253 ZNF324O75467 553 aaPredicted RBP7.44□□□□□ -1.22
SYNE1-206ENST00000367253 IGHV4-34P06331 123 aa7.44□□□□□ -1.22
SYNE1-206ENST00000367253 KLK2P20151 261 aa7.44□□□□□ -1.22
SYNE1-206ENST00000367253 MGST2Q99735 147 aa7.44□□□□□ -1.22
SYNE1-206ENST00000367253 THBDP07204 575 aa7.44□□□□□ -1.22
SYNE1-206ENST00000367253 WNT5AP41221 380 aa7.44□□□□□ -1.22
SYNE1-206ENST00000367253 SSMEM1Q8WWF3 244 aa7.44□□□□□ -1.22
SYNE1-206ENST00000367253 RMI2Q96E14 147 aa7.44□□□□□ -1.22
SYNE1-206ENST00000367253 A0A1W2PR48 441 aa7.43□□□□□ -1.22
SYNE1-206ENST00000367253 CDIPTO14735 213 aa7.43□□□□□ -1.22
SYNE1-206ENST00000367253 CFDP00746 253 aaPredicted RBP7.43□□□□□ -1.22
SYNE1-206ENST00000367253 GAGE1Q13065 139 aa7.43□□□□□ -1.22
SYNE1-206ENST00000367253 GCSAMQ8N6F7 178 aa7.43□□□□□ -1.22
SYNE1-206ENST00000367253 ZNF501Q96CX3 271 aaPredicted RBP7.43□□□□□ -1.22
SYNE1-206ENST00000367253 RBKSQ9H477 322 aa7.43□□□□□ -1.22
SYNE1-206ENST00000367253 CACNG5Q9UF02 275 aa7.43□□□□□ -1.22
SYNE1-206ENST00000367253 C3orf85A0A1B0GTC6 90 aa7.43□□□□□ -1.22
SYNE1-206ENST00000367253 A0A1W2PQD3 144 aa7.43□□□□□ -1.22
SYNE1-206ENST00000367253 UBE2CO00762 179 aa7.43□□□□□ -1.22
SYNE1-206ENST00000367253 FCN3O75636 299 aa7.43□□□□□ -1.22
SYNE1-206ENST00000367253 CEACAM4O75871 244 aa7.43□□□□□ -1.22
SYNE1-206ENST00000367253 GAGE13Q4V321 117 aa7.43□□□□□ -1.22
SYNE1-206ENST00000367253 OR1B1Q8NGR6 318 aa7.43□□□□□ -1.22
SYNE1-206ENST00000367253 CLEC7AQ9BXN2 247 aa7.43□□□□□ -1.22
SYNE1-206ENST00000367253 TRBV20-1A0A075B6N2 111 aa7.43□□□□□ -1.22
SYNE1-206ENST00000367253 GAGE12HA6NDE8 117 aa7.43□□□□□ -1.22
SYNE1-206ENST00000367253 PYY3Q5JQD4 70 aa7.43□□□□□ -1.22
SYNE1-206ENST00000367253 ZNF841Q6ZN19 808 aa7.43□□□□□ -1.22
SYNE1-206ENST00000367253 STHQ8IWL8 128 aa7.43□□□□□ -1.22
SYNE1-206ENST00000367253 FOXC2Q99958 501 aa7.43□□□□□ -1.22
SYNE1-206ENST00000367253 C1QTNF4Q9BXJ3 329 aa7.43□□□□□ -1.22
SYNE1-206ENST00000367253 OR2H1Q9GZK4 316 aa7.43□□□□□ -1.22
SYNE1-206ENST00000367253 ASCC3Q8N3C0 2202 aaKnown RBP7.43□□□□□ -1.22
SYNE1-206ENST00000367253 DOPEY2Q9Y3R5 2298 aa7.43□□□□□ -1.22
SYNE1-206ENST00000367253 CHST1O43916 411 aa7.43□□□□□ -1.22
SYNE1-206ENST00000367253 B3GALT4O96024 378 aa7.43□□□□□ -1.22
SYNE1-206ENST00000367253 SELENOTP62341 195 aa7.43□□□□□ -1.22
SYNE1-206ENST00000367253 MRPL30Q8TCC3 161 aaKnown RBP7.43□□□□□ -1.22
SYNE1-206ENST00000367253 MRPL24Q96A35 216 aaKnown RBP7.43□□□□□ -1.22
SYNE1-206ENST00000367253 PRNDQ9UKY0 176 aa7.43□□□□□ -1.22
SYNE1-206ENST00000367253 IGHV1-45A0A0A0MS14 117 aa7.42□□□□□ -1.22
SYNE1-206ENST00000367253 DPRXA6NFQ7 191 aa7.42□□□□□ -1.22
SYNE1-206ENST00000367253 J3QT63 122 aa7.42□□□□□ -1.22
SYNE1-206ENST00000367253 MMP9P14780 707 aa7.42□□□□□ -1.22
SYNE1-206ENST00000367253 ATP5L2Q7Z4Y8 100 aa7.42□□□□□ -1.22
SYNE1-206ENST00000367253 BIVMQ86UB2 503 aa7.42□□□□□ -1.22
SYNE1-206ENST00000367253 FER1L6-AS1Q8NA97 138 aa7.42□□□□□ -1.22
SYNE1-206ENST00000367253 MZB1Q8WU39 189 aa7.42□□□□□ -1.22
SYNE1-206ENST00000367253 GALNT14Q96FL9 552 aa7.42□□□□□ -1.22
SYNE1-206ENST00000367253 A0A1W2PQF6 199 aa7.42□□□□□ -1.22
SYNE1-206ENST00000367253 IGLV3-25P01717 112 aa7.42□□□□□ -1.22
SYNE1-206ENST00000367253 TRACP01848 142 aa7.42□□□□□ -1.22
SYNE1-206ENST00000367253 C1QCP02747 245 aa7.42□□□□□ -1.22
SYNE1-206ENST00000367253 CD74P04233 296 aa7.42□□□□□ -1.22
SYNE1-206ENST00000367253 NGFRP08138 427 aa7.42□□□□□ -1.22
SYNE1-206ENST00000367253 FAM157CP0CG43 387 aa7.42□□□□□ -1.22
SYNE1-206ENST00000367253 DYNLT3P51808 116 aa7.42□□□□□ -1.22
SYNE1-206ENST00000367253 CLDN18P56856 261 aa7.42□□□□□ -1.22
SYNE1-206ENST00000367253 RPL18Q07020 188 aaKnown RBP7.42□□□□□ -1.22
SYNE1-206ENST00000367253 C1orf195Q5TG92 126 aa7.42□□□□□ -1.22
SYNE1-206ENST00000367253 XAF1Q6GPH4 301 aa7.42□□□□□ -1.22
SYNE1-206ENST00000367253 FAM219AQ8IW50 185 aa7.42□□□□□ -1.22
SYNE1-206ENST00000367253 MMD2Q8IY49 270 aa7.42□□□□□ -1.22
SYNE1-206ENST00000367253 C20orf196Q8IYI0 205 aa7.42□□□□□ -1.22
SYNE1-206ENST00000367253 C17orf47Q8NEP4 570 aa7.42□□□□□ -1.22
SYNE1-206ENST00000367253 ITLN2Q8WWU7 325 aaPredicted RBP7.42□□□□□ -1.22
SYNE1-206ENST00000367253 SOSTQ9BQB4 213 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms