RNA–Protein interactions for RNA: ENST00000364047.1

RNU6-553P-201, Transcript of RNA, U6 small nuclear 553, pseudogene, humanhuman

BASIC

Gene RNU6-553P, Length 96 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-553P-201ENST00000364047 TIMM22Q9Y584 194 aa0.19□□□□□ -2.38
RNU6-553P-201ENST00000364047 GLI3P10071 1580 aa0.19□□□□□ -2.38
RNU6-553P-201ENST00000364047 NCOA6Q14686 2063 aaPredicted RBP0.18□□□□□ -2.38
RNU6-553P-201ENST00000364047 CHD2O14647 1828 aaKnown RBP0.18□□□□□ -2.38
RNU6-553P-201ENST00000364047 A0A087WX48 190 aa0.18□□□□□ -2.38
RNU6-553P-201ENST00000364047 IRGMA1A4Y4 181 aa0.18□□□□□ -2.38
RNU6-553P-201ENST00000364047 BRI3O95415 125 aa0.18□□□□□ -2.38
RNU6-553P-201ENST00000364047 MSMBP08118 114 aa0.18□□□□□ -2.38
RNU6-553P-201ENST00000364047 JOSD1Q15040 202 aaPredicted RBP0.18□□□□□ -2.38
RNU6-553P-201ENST00000364047 SPATA8Q6RVD6 105 aa0.18□□□□□ -2.38
RNU6-553P-201ENST00000364047 ZNF676Q8N7Q3 588 aa0.18□□□□□ -2.38
RNU6-553P-201ENST00000364047 OBSCN-AS1Q96MR7 158 aa0.18□□□□□ -2.38
RNU6-553P-201ENST00000364047 RBP7Q96R05 134 aa0.18□□□□□ -2.38
RNU6-553P-201ENST00000364047 CCL13Q99616 98 aa0.18□□□□□ -2.38
RNU6-553P-201ENST00000364047 XAGE1AQ9HD64 81 aa0.18□□□□□ -2.38
RNU6-553P-201ENST00000364047 EIF4G1Q04637 1599 aaKnown RBP0.18□□□□□ -2.38
RNU6-553P-201ENST00000364047 TRBV10-2A0A0K0K1G8 114 aa0.17□□□□□ -2.38
RNU6-553P-201ENST00000364047 C5orf49A4QMS7 147 aa0.17□□□□□ -2.38
RNU6-553P-201ENST00000364047 COX7A2LO14548 114 aa0.17□□□□□ -2.38
RNU6-553P-201ENST00000364047 PMP2P02689 132 aa0.17□□□□□ -2.38
RNU6-553P-201ENST00000364047 HIST1H1CP16403 213 aaKnown RBP0.17□□□□□ -2.38
RNU6-553P-201ENST00000364047 KDELR2P33947 212 aa0.17□□□□□ -2.38
RNU6-553P-201ENST00000364047 HAAOP46952 286 aa0.17□□□□□ -2.38
RNU6-553P-201ENST00000364047 HLA-DRB3P79483 266 aa0.17□□□□□ -2.38
RNU6-553P-201ENST00000364047 ZNF345Q14585 488 aa0.17□□□□□ -2.38
RNU6-553P-201ENST00000364047 EBPQ15125 230 aaKnown RBP0.17□□□□□ -2.38
RNU6-553P-201ENST00000364047 ZNHIT3Q15649 155 aaPredicted RBP0.17□□□□□ -2.38
RNU6-553P-201ENST00000364047 LRRC26Q2I0M4 334 aa0.17□□□□□ -2.38
RNU6-553P-201ENST00000364047 HLA-DRB5Q30154 266 aa0.17□□□□□ -2.38
RNU6-553P-201ENST00000364047 COPS6Q7L5N1 327 aa0.17□□□□□ -2.38
RNU6-553P-201ENST00000364047 C17orf78Q8N4C9 275 aa0.17□□□□□ -2.38
RNU6-553P-201ENST00000364047 SPERTQ8NA61 448 aa0.17□□□□□ -2.38
RNU6-553P-201ENST00000364047 OR4C6Q8NH72 309 aa0.17□□□□□ -2.38
RNU6-553P-201ENST00000364047 SIKE1Q9BRV8 207 aa0.17□□□□□ -2.38
RNU6-553P-201ENST00000364047 HEATR5BQ9P2D3 2071 aa0.17□□□□□ -2.38
RNU6-553P-201ENST00000364047 SSPOA2VEC9 5147 aa0.16□□□□□ -2.38
RNU6-553P-201ENST00000364047 TEX50A0A1B0GTY4 177 aa0.16□□□□□ -2.38
RNU6-553P-201ENST00000364047 STX10O60499 249 aa0.16□□□□□ -2.38
RNU6-553P-201ENST00000364047 NSA2O95478 260 aaKnown RBP0.16□□□□□ -2.38
RNU6-553P-201ENST00000364047 RUNX1Q01196 453 aa0.16□□□□□ -2.38
RNU6-553P-201ENST00000364047 RIBC1Q8N443 379 aaPredicted RBP0.16□□□□□ -2.38
RNU6-553P-201ENST00000364047 ASB13Q8WXK3 278 aa0.16□□□□□ -2.38
RNU6-553P-201ENST00000364047 GNPNAT1Q96EK6 184 aaPredicted RBP0.16□□□□□ -2.38
RNU6-553P-201ENST00000364047 LINC00526Q96FQ7 95 aa0.16□□□□□ -2.38
RNU6-553P-201ENST00000364047 CFAP45Q9UL16 551 aa0.16□□□□□ -2.38
RNU6-553P-201ENST00000364047 BAIAP2Q9UQB8 552 aa0.16□□□□□ -2.38
RNU6-553P-201ENST00000364047 CHD5Q8TDI0 1954 aa0.15□□□□□ -2.38
RNU6-553P-201ENST00000364047 LOC100506127A0A0U1RQW1 187 aa0.15□□□□□ -2.39
RNU6-553P-201ENST00000364047 CCRL2O00421 344 aa0.15□□□□□ -2.39
RNU6-553P-201ENST00000364047 NEMFO60524 1076 aa0.15□□□□□ -2.39
RNU6-553P-201ENST00000364047 ATP6V1G2O95670 118 aa0.15□□□□□ -2.39
RNU6-553P-201ENST00000364047 SHBGP04278 402 aa0.15□□□□□ -2.39
RNU6-553P-201ENST00000364047 CD40LGP29965 261 aa0.15□□□□□ -2.39
RNU6-553P-201ENST00000364047 RPS24P62847 133 aaKnown RBP0.15□□□□□ -2.39
RNU6-553P-201ENST00000364047 ZNF846Q147U1 533 aa0.15□□□□□ -2.39
RNU6-553P-201ENST00000364047 Q3ZCU0 254 aa0.15□□□□□ -2.39
RNU6-553P-201ENST00000364047 ANKRD36BP1Q96IX9 119 aa0.15□□□□□ -2.39
RNU6-553P-201ENST00000364047 ERMAPQ96PL5 475 aaPredicted RBP0.15□□□□□ -2.39
RNU6-553P-201ENST00000364047 TIPINQ9BVW5 301 aa0.15□□□□□ -2.39
RNU6-553P-201ENST00000364047 HES4Q9HCC6 221 aa0.15□□□□□ -2.39
RNU6-553P-201ENST00000364047 AGPAT3Q9NRZ7 376 aa0.15□□□□□ -2.39
RNU6-553P-201ENST00000364047 C1orf109Q9NX04 203 aa0.15□□□□□ -2.39
RNU6-553P-201ENST00000364047 PRELID1Q9Y255 219 aa0.15□□□□□ -2.39
RNU6-553P-201ENST00000364047 ZFP30Q9Y2G7 519 aa0.15□□□□□ -2.39
RNU6-553P-201ENST00000364047 NEBP20929 6669 aa0.15□□□□□ -2.39
RNU6-553P-201ENST00000364047 A0A1W2PP64 1363 aa0.15□□□□□ -2.39
RNU6-553P-201ENST00000364047 LOC110117498A0A087WWA1 95 aa0.14□□□□□ -2.39
RNU6-553P-201ENST00000364047 C21orf140B9A014 251 aa0.14□□□□□ -2.39
RNU6-553P-201ENST00000364047 K7ERQ8 282 aa0.14□□□□□ -2.39
RNU6-553P-201ENST00000364047 LEPROTO15243 131 aa0.14□□□□□ -2.39
RNU6-553P-201ENST00000364047 SLC22A1O15245 554 aa0.14□□□□□ -2.39
RNU6-553P-201ENST00000364047 APOMO95445 188 aa0.14□□□□□ -2.39
RNU6-553P-201ENST00000364047 METTL15P1P0C7V9 234 aa0.14□□□□□ -2.39
RNU6-553P-201ENST00000364047 SULT1A3P0DMM9 295 aa0.14□□□□□ -2.39
RNU6-553P-201ENST00000364047 SULT1A4P0DMN0 295 aa0.14□□□□□ -2.39
RNU6-553P-201ENST00000364047 FXYD2P54710 66 aa0.14□□□□□ -2.39
RNU6-553P-201ENST00000364047 SLAMF1Q13291 335 aa0.14□□□□□ -2.39
RNU6-553P-201ENST00000364047 TBC1D19Q8N5T2 526 aa0.14□□□□□ -2.39
RNU6-553P-201ENST00000364047 Q8N6K4 173 aa0.14□□□□□ -2.39
RNU6-553P-201ENST00000364047 OR5B17Q8NGF7 314 aa0.14□□□□□ -2.39
RNU6-553P-201ENST00000364047 OR5L1Q8NGL2 311 aa0.14□□□□□ -2.39
RNU6-553P-201ENST00000364047 SLC37A2Q8TED4 501 aa0.14□□□□□ -2.39
RNU6-553P-201ENST00000364047 HRASLSQ9HDD0 168 aa0.14□□□□□ -2.39
RNU6-553P-201ENST00000364047 SIPA1L1O43166 1804 aa0.14□□□□□ -2.39
RNU6-553P-201ENST00000364047 DICER1Q9UPY3 1922 aaKnown RBP0.14□□□□□ -2.39
RNU6-553P-201ENST00000364047 IGKV1D-42A0A075B6H8 117 aa0.13□□□□□ -2.39
RNU6-553P-201ENST00000364047 IL6P05231 212 aa0.13□□□□□ -2.39
RNU6-553P-201ENST00000364047 S100A9P06702 114 aaKnown RBP0.13□□□□□ -2.39
RNU6-553P-201ENST00000364047 CSN1S1P47710 185 aa0.13□□□□□ -2.39
RNU6-553P-201ENST00000364047 UBE2IP63279 158 aaKnown RBP0.13□□□□□ -2.39
RNU6-553P-201ENST00000364047 SSX8Q7RTT4 187 aa0.13□□□□□ -2.39
RNU6-553P-201ENST00000364047 TP53TG1Q9Y2A0 90 aa0.13□□□□□ -2.39
RNU6-553P-201ENST00000364047 LRPPRCP42704 1394 aaKnown RBP0.13□□□□□ -2.39
RNU6-553P-201ENST00000364047 USP24Q9UPU5 2620 aa0.13□□□□□ -2.39
RNU6-553P-201ENST00000364047 RIMS2Q9UQ26 1411 aa0.13□□□□□ -2.39
RNU6-553P-201ENST00000364047 C19orf84I3L1E1 186 aa0.12□□□□□ -2.39
RNU6-553P-201ENST00000364047 COCHO43405 550 aa0.12□□□□□ -2.39
RNU6-553P-201ENST00000364047 HLA-DMBP28068 263 aa0.12□□□□□ -2.39
RNU6-553P-201ENST00000364047 C10orf67Q8IYJ2 551 aa0.12□□□□□ -2.39
RNU6-553P-201ENST00000364047 OR1M1Q8NGA1 313 aa0.12□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms