RNA–Protein interactions for RNA: ENST00000362011.6

SHISA4-201, Transcript of shisa family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA4, Length 1,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-201ENST00000362011 SMCO1Q147U7 214 aa16.52■□□□□ 0.24
SHISA4-201ENST00000362011 IZUMO4Q1ZYL8 232 aa16.52■□□□□ 0.24
SHISA4-201ENST00000362011 DEFB112Q30KQ8 113 aa16.52■□□□□ 0.24
SHISA4-201ENST00000362011 OR4A47Q6IF82 309 aa16.52■□□□□ 0.24
SHISA4-201ENST00000362011 ZBTB8BQ8NAP8 495 aaPredicted RBP16.52■□□□□ 0.24
SHISA4-201ENST00000362011 ASB13Q8WXK3 278 aa16.52■□□□□ 0.24
SHISA4-201ENST00000362011 RITA1Q96K30 269 aa16.52■□□□□ 0.24
SHISA4-201ENST00000362011 OR2A7Q96R45 310 aa16.52■□□□□ 0.24
SHISA4-201ENST00000362011 SSX3Q99909 188 aa16.52■□□□□ 0.24
SHISA4-201ENST00000362011 BET1LQ9NYM9 111 aa16.52■□□□□ 0.24
SHISA4-201ENST00000362011 SVEP1Q4LDE5 3571 aa16.52■□□□□ 0.24
SHISA4-201ENST00000362011 SPDEFO95238 335 aa16.51■□□□□ 0.23
SHISA4-201ENST00000362011 IGLV2-23P01705 113 aa16.51■□□□□ 0.23
SHISA4-201ENST00000362011 TMEM11P17152 192 aa16.51■□□□□ 0.23
SHISA4-201ENST00000362011 CYCSP99999 105 aaKnown RBP16.51■□□□□ 0.23
SHISA4-201ENST00000362011 SRSF4Q08170 494 aaKnown RBP16.51■□□□□ 0.23
SHISA4-201ENST00000362011 HNF4GQ14541 408 aa16.51■□□□□ 0.23
SHISA4-201ENST00000362011 AANATQ16613 207 aa16.51■□□□□ 0.23
SHISA4-201ENST00000362011 PUSL1Q8N0Z8 303 aaKnown RBP16.51■□□□□ 0.23
SHISA4-201ENST00000362011 VSTM2AQ8TAG5 236 aa16.51■□□□□ 0.23
SHISA4-201ENST00000362011 C22orf15Q8WYQ4 148 aa16.51■□□□□ 0.23
SHISA4-201ENST00000362011 NMES1Q9C002 83 aa16.51■□□□□ 0.23
SHISA4-201ENST00000362011 CACNG5Q9UF02 275 aa16.51■□□□□ 0.23
SHISA4-201ENST00000362011 MDFIC2A0A1B0GVS7 189 aa16.5■□□□□ 0.23
SHISA4-201ENST00000362011 PFDN1O60925 122 aa16.5■□□□□ 0.23
SHISA4-201ENST00000362011 OR9G9P0C7N8 305 aa16.5■□□□□ 0.23
SHISA4-201ENST00000362011 CNTFRP26992 372 aa16.5■□□□□ 0.23
SHISA4-201ENST00000362011 UBE2KP61086 200 aa16.5■□□□□ 0.23
SHISA4-201ENST00000362011 RAP2BP61225 183 aa16.5■□□□□ 0.23
SHISA4-201ENST00000362011 Q8N6K4 173 aa16.5■□□□□ 0.23
SHISA4-201ENST00000362011 TEX45Q8NA69 505 aa16.5■□□□□ 0.23
SHISA4-201ENST00000362011 OR1S1Q8NH92 325 aa16.5■□□□□ 0.23
SHISA4-201ENST00000362011 ST6GAL2Q96JF0 529 aa16.5■□□□□ 0.23
SHISA4-201ENST00000362011 NEURL2Q9BR09 285 aa16.5■□□□□ 0.23
SHISA4-201ENST00000362011 RANGRFQ9HD47 186 aaPredicted RBP16.5■□□□□ 0.23
SHISA4-201ENST00000362011 GSKIPQ9P0R6 139 aa16.5■□□□□ 0.23
SHISA4-201ENST00000362011 SLC25A17O43808 307 aa16.49■□□□□ 0.23
SHISA4-201ENST00000362011 SNAPC5O75971 98 aa16.49■□□□□ 0.23
SHISA4-201ENST00000362011 KBTBD11O94819 623 aa16.49■□□□□ 0.23
SHISA4-201ENST00000362011 PSG5Q15238 335 aa16.49■□□□□ 0.23
SHISA4-201ENST00000362011 MMDQ15546 238 aa16.49■□□□□ 0.23
SHISA4-201ENST00000362011 FBLN7Q53RD9 439 aa16.49■□□□□ 0.23
SHISA4-201ENST00000362011 Q6ZRM9 215 aa16.49■□□□□ 0.23
SHISA4-201ENST00000362011 OR4A16Q8NH70 328 aa16.49■□□□□ 0.23
SHISA4-201ENST00000362011 OR4A5Q8NH83 315 aa16.49■□□□□ 0.23
SHISA4-201ENST00000362011 ZDHHC16Q969W1 377 aa16.49■□□□□ 0.23
SHISA4-201ENST00000362011 COA4Q9NYJ1 87 aa16.49■□□□□ 0.23
SHISA4-201ENST00000362011 KIAA1456Q9P272 454 aa16.49■□□□□ 0.23
SHISA4-201ENST00000362011 TNCP24821 2201 aa16.49■□□□□ 0.23
SHISA4-201ENST00000362011 H3BUX3 64 aa16.48■□□□□ 0.23
SHISA4-201ENST00000362011 UPK2O00526 184 aa16.48■□□□□ 0.23
SHISA4-201ENST00000362011 NBR2O15453 112 aa16.48■□□□□ 0.23
SHISA4-201ENST00000362011 NDUFA3O95167 84 aa16.48■□□□□ 0.23
SHISA4-201ENST00000362011 IL6RP08887 468 aaPredicted RBP16.48■□□□□ 0.23
SHISA4-201ENST00000362011 NPBQ8NG41 125 aa16.48■□□□□ 0.23
SHISA4-201ENST00000362011 OR4D5Q8NGN0 318 aa16.48■□□□□ 0.23
SHISA4-201ENST00000362011 TMEM167AQ8TBQ9 72 aa16.48■□□□□ 0.23
SHISA4-201ENST00000362011 WDR89Q96FK6 387 aaPredicted RBP16.48■□□□□ 0.23
SHISA4-201ENST00000362011 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.48■□□□□ 0.23
SHISA4-201ENST00000362011 METTL1Q9UBP6 276 aaKnown RBP16.48■□□□□ 0.23
SHISA4-201ENST00000362011 TRAV3A0A0B4J244 114 aa16.47■□□□□ 0.23
SHISA4-201ENST00000362011 RRHO14718 337 aa16.47■□□□□ 0.23
SHISA4-201ENST00000362011 PITX3O75364 302 aa16.47■□□□□ 0.23
SHISA4-201ENST00000362011 RBMXL2O75526 392 aaKnown RBP16.47■□□□□ 0.23
SHISA4-201ENST00000362011 F2RL1P55085 397 aa16.47■□□□□ 0.23
SHISA4-201ENST00000362011 RELBQ01201 579 aa16.47■□□□□ 0.23
SHISA4-201ENST00000362011 FOXRED2Q8IWF2 684 aa16.47■□□□□ 0.23
SHISA4-201ENST00000362011 OR8H1Q8NGG4 311 aa16.47■□□□□ 0.23
SHISA4-201ENST00000362011 PIFOQ8TCI5 191 aa16.47■□□□□ 0.23
SHISA4-201ENST00000362011 FYTTD1Q96QD9 318 aaKnown RBP16.47■□□□□ 0.23
SHISA4-201ENST00000362011 C19orf24Q9BVV8 132 aa16.47■□□□□ 0.23
SHISA4-201ENST00000362011 C1RLQ9NZP8 487 aa16.47■□□□□ 0.23
SHISA4-201ENST00000362011 NSG2Q9Y328 171 aa16.47■□□□□ 0.23
SHISA4-201ENST00000362011 PLXNB1O43157 2135 aa16.47■□□□□ 0.23
SHISA4-201ENST00000362011 C15orf61A6NNL5 157 aa16.46■□□□□ 0.23
SHISA4-201ENST00000362011 SCGB1D2O95969 90 aa16.46■□□□□ 0.23
SHISA4-201ENST00000362011 CRYGBP07316 175 aa16.46■□□□□ 0.23
SHISA4-201ENST00000362011 OR2B8PP59922 312 aa16.46■□□□□ 0.23
SHISA4-201ENST00000362011 IL15RAQ13261 267 aa16.46■□□□□ 0.23
SHISA4-201ENST00000362011 PLGLAQ15195 96 aa16.46■□□□□ 0.23
SHISA4-201ENST00000362011 TCTE3Q8IZS6 198 aa16.46■□□□□ 0.23
SHISA4-201ENST00000362011 ZNF48Q96MX3 618 aaPredicted RBP16.46■□□□□ 0.23
SHISA4-201ENST00000362011 FBXL15Q9H469 300 aa16.46■□□□□ 0.23
SHISA4-201ENST00000362011 PRDM13Q9H4Q3 707 aa16.46■□□□□ 0.23
SHISA4-201ENST00000362011 PITPNC1Q9UKF7 332 aa16.46■□□□□ 0.23
SHISA4-201ENST00000362011 TCF19Q9Y242 345 aa16.46■□□□□ 0.23
SHISA4-201ENST00000362011 SIGLEC9Q9Y336 463 aa16.46■□□□□ 0.23
SHISA4-201ENST00000362011 NKX2-1P43699 371 aaPredicted RBP16.45■□□□□ 0.22
SHISA4-201ENST00000362011 SCGB2A2Q13296 93 aa16.45■□□□□ 0.22
SHISA4-201ENST00000362011 Q6YL49 198 aa16.45■□□□□ 0.22
SHISA4-201ENST00000362011 PPP1R1CQ8WVI7 109 aa16.45■□□□□ 0.22
SHISA4-201ENST00000362011 RBM14Q96PK6 669 aaKnown RBP16.45■□□□□ 0.22
SHISA4-201ENST00000362011 TPSG1Q9NRR2 321 aa16.45■□□□□ 0.22
SHISA4-201ENST00000362011 PRNDQ9UKY0 176 aa16.45■□□□□ 0.22
SHISA4-201ENST00000362011 FOXA2Q9Y261 457 aaPredicted RBP16.45■□□□□ 0.22
SHISA4-201ENST00000362011 A6NDX4 124 aa16.45■□□□□ 0.22
SHISA4-201ENST00000362011 BTBD17A6NE02 478 aa16.45■□□□□ 0.22
SHISA4-201ENST00000362011 NCBP2LA6PVI3 153 aaKnown RBP16.45■□□□□ 0.22
SHISA4-201ENST00000362011 FAM90A26D6RGX4 464 aa16.45■□□□□ 0.22
SHISA4-201ENST00000362011 NXPH3O95157 252 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms