RNA–Protein interactions for RNA: ENST00000361138.6

SMC5-201, Transcript of structural maintenance of chromosomes 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC5, Length 5,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-201ENST00000361138 REG1BP48304 166 aa11.84□□□□□ -0.51
SMC5-201ENST00000361138 F11RQ9Y624 299 aaKnown RBP11.84□□□□□ -0.51
SMC5-201ENST00000361138 IZUMO1RA6ND01 250 aa11.83□□□□□ -0.51
SMC5-201ENST00000361138 KRTCAP3Q53RY4 240 aa11.83□□□□□ -0.51
SMC5-201ENST00000361138 NEU1Q99519 415 aa11.83□□□□□ -0.51
SMC5-201ENST00000361138 SMOC1Q9H4F8 434 aa11.83□□□□□ -0.51
SMC5-201ENST00000361138 AP5S1Q9NUS5 200 aa11.83□□□□□ -0.51
SMC5-201ENST00000361138 SCN8AQ9UQD0 1980 aa11.83□□□□□ -0.52
SMC5-201ENST00000361138 B4E171 279 aa11.83□□□□□ -0.52
SMC5-201ENST00000361138 MPV17P39210 176 aa11.83□□□□□ -0.52
SMC5-201ENST00000361138 OR10J3Q5JRS4 329 aa11.83□□□□□ -0.52
SMC5-201ENST00000361138 PCSK4Q6UW60 755 aa11.83□□□□□ -0.52
SMC5-201ENST00000361138 PLXNA3P51805 1871 aa11.83□□□□□ -0.52
SMC5-201ENST00000361138 KLF7O75840 302 aaPredicted RBP11.83□□□□□ -0.52
SMC5-201ENST00000361138 SOX8P57073 446 aa11.83□□□□□ -0.52
SMC5-201ENST00000361138 QRFPP83859 136 aa11.83□□□□□ -0.52
SMC5-201ENST00000361138 HOXA4Q00056 320 aaPredicted RBP11.83□□□□□ -0.52
SMC5-201ENST00000361138 SLC25A53Q5H9E4 307 aa11.83□□□□□ -0.52
SMC5-201ENST00000361138 SAPCD1Q5SSQ6 148 aa11.83□□□□□ -0.52
SMC5-201ENST00000361138 DPF1Q92782 380 aa11.83□□□□□ -0.52
SMC5-201ENST00000361138 ZNF319Q9P2F9 582 aa11.83□□□□□ -0.52
SMC5-201ENST00000361138 LINC00614P0C842 121 aa11.83□□□□□ -0.52
SMC5-201ENST00000361138 RPL30P62888 115 aaKnown RBP11.83□□□□□ -0.52
SMC5-201ENST00000361138 SLC25A33Q9BSK2 321 aa11.83□□□□□ -0.52
SMC5-201ENST00000361138 HSPB7Q9UBY9 170 aa11.83□□□□□ -0.52
SMC5-201ENST00000361138 C9JQL5 133 aa11.83□□□□□ -0.52
SMC5-201ENST00000361138 NUDT3O95989 172 aa11.83□□□□□ -0.52
SMC5-201ENST00000361138 SMIM13P0DJ93 91 aa11.83□□□□□ -0.52
SMC5-201ENST00000361138 SSTR5P35346 364 aa11.83□□□□□ -0.52
SMC5-201ENST00000361138 RTN4RL2Q86UN3 420 aa11.83□□□□□ -0.52
SMC5-201ENST00000361138 ZNF664Q8N3J9 261 aa11.83□□□□□ -0.52
SMC5-201ENST00000361138 MS4A5Q9H3V2 200 aa11.83□□□□□ -0.52
SMC5-201ENST00000361138 CKS2P33552 79 aa11.82□□□□□ -0.52
SMC5-201ENST00000361138 TFPI2P48307 235 aa11.82□□□□□ -0.52
SMC5-201ENST00000361138 CHRNA10Q9GZZ6 450 aa11.82□□□□□ -0.52
SMC5-201ENST00000361138 F5H697 171 aa11.82□□□□□ -0.52
SMC5-201ENST00000361138 CFPP27918 469 aa11.82□□□□□ -0.52
SMC5-201ENST00000361138 A1L4Q6 167 aa11.82□□□□□ -0.52
SMC5-201ENST00000361138 TBR1Q16650 682 aa11.82□□□□□ -0.52
SMC5-201ENST00000361138 ST6GALNAC3Q8NDV1 305 aa11.82□□□□□ -0.52
SMC5-201ENST00000361138 CLEC5AQ9NY25 188 aa11.82□□□□□ -0.52
SMC5-201ENST00000361138 C17orf98A8MV24 154 aa11.82□□□□□ -0.52
SMC5-201ENST00000361138 RPL8P62917 257 aaKnown RBP11.82□□□□□ -0.52
SMC5-201ENST00000361138 TMEM108Q6UXF1 575 aa11.82□□□□□ -0.52
SMC5-201ENST00000361138 ASCL5Q7RTU5 278 aa11.82□□□□□ -0.52
SMC5-201ENST00000361138 CHODLQ9H9P2 273 aa11.82□□□□□ -0.52
SMC5-201ENST00000361138 WDR31Q8NA23 367 aa11.81□□□□□ -0.52
SMC5-201ENST00000361138 C1QTNF5Q9BXJ0 243 aa11.81□□□□□ -0.52
SMC5-201ENST00000361138 PTGDSP41222 190 aa11.81□□□□□ -0.52
SMC5-201ENST00000361138 ZNF841Q6ZN19 808 aa11.81□□□□□ -0.52
SMC5-201ENST00000361138 MRPL52Q86TS9 123 aaKnown RBP11.81□□□□□ -0.52
SMC5-201ENST00000361138 AGMATQ9BSE5 352 aa11.81□□□□□ -0.52
SMC5-201ENST00000361138 PRDM13Q9H4Q3 707 aa11.81□□□□□ -0.52
SMC5-201ENST00000361138 CALYQ9NYX4 217 aa11.81□□□□□ -0.52
SMC5-201ENST00000361138 RFNGQ9Y644 331 aa11.81□□□□□ -0.52
SMC5-201ENST00000361138 ZIC3O60481 467 aa11.81□□□□□ -0.52
SMC5-201ENST00000361138 TMEM238LA0A1B0GVL6 79 aa11.81□□□□□ -0.52
SMC5-201ENST00000361138 A6NJY4 79 aa11.81□□□□□ -0.52
SMC5-201ENST00000361138 COX6A1P12074 109 aa11.81□□□□□ -0.52
SMC5-201ENST00000361138 GPR6P46095 362 aaPredicted RBP11.81□□□□□ -0.52
SMC5-201ENST00000361138 MMDQ15546 238 aa11.81□□□□□ -0.52
SMC5-201ENST00000361138 GNB1LQ9BYB4 327 aa11.81□□□□□ -0.52
SMC5-201ENST00000361138 SLC25A10Q9UBX3 287 aaPredicted RBP11.81□□□□□ -0.52
SMC5-201ENST00000361138 ERASQ7Z444 233 aa11.8□□□□□ -0.52
SMC5-201ENST00000361138 TNFRSF19Q9NS68 423 aa11.8□□□□□ -0.52
SMC5-201ENST00000361138 HS3ST3B1Q9Y662 390 aa11.8□□□□□ -0.52
SMC5-201ENST00000361138 GZMBP10144 247 aa11.8□□□□□ -0.52
SMC5-201ENST00000361138 C1orf174Q8IYL3 243 aa11.8□□□□□ -0.52
SMC5-201ENST00000361138 SRSF12Q8WXF0 261 aaKnown RBP11.8□□□□□ -0.52
SMC5-201ENST00000361138 CHCHD2Q9Y6H1 151 aaPredicted RBP11.8□□□□□ -0.52
SMC5-201ENST00000361138 ZNF324O75467 553 aaPredicted RBP11.8□□□□□ -0.52
SMC5-201ENST00000361138 FHL1Q13642 323 aa11.8□□□□□ -0.52
SMC5-201ENST00000361138 PCOLCEQ15113 449 aa11.8□□□□□ -0.52
SMC5-201ENST00000361138 SGK494Q96LW2 274 aa11.8□□□□□ -0.52
SMC5-201ENST00000361138 SCNM1Q9BWG6 230 aa11.8□□□□□ -0.52
SMC5-201ENST00000361138 IGFBP2P18065 325 aa11.8□□□□□ -0.52
SMC5-201ENST00000361138 HIST1H4GQ99525 98 aa11.8□□□□□ -0.52
SMC5-201ENST00000361138 DUSP15Q9H1R2 295 aaPredicted RBP11.8□□□□□ -0.52
SMC5-201ENST00000361138 IDI2-AS1Q9NZ38 188 aa11.8□□□□□ -0.52
SMC5-201ENST00000361138 FOXA3P55318 350 aaPredicted RBP11.8□□□□□ -0.52
SMC5-201ENST00000361138 FADS6Q8N9I5 356 aa11.8□□□□□ -0.52
SMC5-201ENST00000361138 TRAV9-2A0A087WT02 112 aa11.79□□□□□ -0.52
SMC5-201ENST00000361138 RND2P52198 227 aa11.79□□□□□ -0.52
SMC5-201ENST00000361138 MAP1LC3AQ9H492 121 aa11.79□□□□□ -0.52
SMC5-201ENST00000361138 CD55P08174 381 aa11.79□□□□□ -0.52
SMC5-201ENST00000361138 A0A1B0GV72 72 aa11.79□□□□□ -0.52
SMC5-201ENST00000361138 A8MWP6 167 aa11.79□□□□□ -0.52
SMC5-201ENST00000361138 CTSSP25774 331 aa11.79□□□□□ -0.52
SMC5-201ENST00000361138 CEACAM3P40198 252 aa11.79□□□□□ -0.52
SMC5-201ENST00000361138 TDGF1P3P51864 188 aa11.79□□□□□ -0.52
SMC5-201ENST00000361138 MIR17HGQ75NE6 70 aa11.79□□□□□ -0.52
SMC5-201ENST00000361138 INSIG2Q9Y5U4 225 aa11.79□□□□□ -0.52
SMC5-201ENST00000361138 MKRN2OSH3BPM6 223 aa11.79□□□□□ -0.52
SMC5-201ENST00000361138 TSPAN7P41732 249 aa11.79□□□□□ -0.52
SMC5-201ENST00000361138 OR51G1Q8NGK1 321 aa11.79□□□□□ -0.52
SMC5-201ENST00000361138 ZNF714Q96N38 554 aa11.79□□□□□ -0.52
SMC5-201ENST00000361138 RNASE7Q9H1E1 156 aaKnown RBP11.79□□□□□ -0.52
SMC5-201ENST00000361138 C12orf77C9JDV5 145 aa11.79□□□□□ -0.52
SMC5-201ENST00000361138 RBFOX2O43251 390 aaKnown RBP eCLIP11.79□□□□□ -0.52
SMC5-201ENST00000361138 GNB2P62879 340 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms