RNA–Protein interactions for RNA: ENST00000360579.11

VPS29-201, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 1,091 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-201ENST00000360579 OR51E2Q9H255 320 aa10.27□□□□□ -0.77
VPS29-201ENST00000360579 C5orf66Q9H5L9 145 aa10.27□□□□□ -0.77
VPS29-201ENST00000360579 SLC2A9Q9NRM0 540 aa10.27□□□□□ -0.77
VPS29-201ENST00000360579 MRPS7Q9Y2R9 242 aaKnown RBP10.27□□□□□ -0.77
VPS29-201ENST00000360579 UFC1Q9Y3C8 167 aa10.27□□□□□ -0.77
VPS29-201ENST00000360579 HMX3A6NHT5 357 aa10.26□□□□□ -0.77
VPS29-201ENST00000360579 TEX22C9J3V5 150 aa10.26□□□□□ -0.77
VPS29-201ENST00000360579 IFNA4P05014 189 aa10.26□□□□□ -0.77
VPS29-201ENST00000360579 CRYGCP07315 174 aa10.26□□□□□ -0.77
VPS29-201ENST00000360579 FCGR3AP08637 254 aa10.26□□□□□ -0.77
VPS29-201ENST00000360579 UCHL1P09936 223 aa10.26□□□□□ -0.77
VPS29-201ENST00000360579 PSMB6P28072 239 aa10.26□□□□□ -0.77
VPS29-201ENST00000360579 MAS1LP35410 378 aa10.26□□□□□ -0.77
VPS29-201ENST00000360579 RPL27AP46776 148 aaKnown RBP10.26□□□□□ -0.77
VPS29-201ENST00000360579 RAB11BQ15907 218 aa10.26□□□□□ -0.77
VPS29-201ENST00000360579 ZNF585BQ52M93 769 aa10.26□□□□□ -0.77
VPS29-201ENST00000360579 PLAC9Q5JTB6 97 aa10.26□□□□□ -0.77
VPS29-201ENST00000360579 FBLIM1Q8WUP2 373 aa10.26□□□□□ -0.77
VPS29-201ENST00000360579 CXorf58Q96LI9 332 aa10.26□□□□□ -0.77
VPS29-201ENST00000360579 FANCD2OSQ96PS1 177 aa10.26□□□□□ -0.77
VPS29-201ENST00000360579 S100A14Q9HCY8 104 aa10.26□□□□□ -0.77
VPS29-201ENST00000360579 PSORS1C1Q9UIG5 152 aa10.26□□□□□ -0.77
VPS29-201ENST00000360579 PRELID3BQ9Y3B1 194 aa10.26□□□□□ -0.77
VPS29-201ENST00000360579 PKHD1P08F94 4074 aa10.25□□□□□ -0.77
VPS29-201ENST00000360579 FAT2Q9NYQ8 4349 aa10.25□□□□□ -0.77
VPS29-201ENST00000360579 TSPAN4O14817 238 aa10.25□□□□□ -0.77
VPS29-201ENST00000360579 FCGR3BO75015 233 aa10.25□□□□□ -0.77
VPS29-201ENST00000360579 CLEC3BP05452 202 aa10.25□□□□□ -0.77
VPS29-201ENST00000360579 ARFRP1Q13795 201 aa10.25□□□□□ -0.77
VPS29-201ENST00000360579 KLK9Q2XQG4 91 aa10.25□□□□□ -0.77
VPS29-201ENST00000360579 LAMTOR1Q6IAA8 161 aa10.25□□□□□ -0.77
VPS29-201ENST00000360579 AHSA2Q719I0 299 aa10.25□□□□□ -0.77
VPS29-201ENST00000360579 RAB3CQ96E17 227 aa10.25□□□□□ -0.77
VPS29-201ENST00000360579 GALNT14Q96FL9 552 aa10.25□□□□□ -0.77
VPS29-201ENST00000360579 OR2A7Q96R45 310 aa10.25□□□□□ -0.77
VPS29-201ENST00000360579 C6orf62Q9GZU0 229 aaPredicted RBP10.25□□□□□ -0.77
VPS29-201ENST00000360579 KLK9Q9UKQ9 250 aa10.25□□□□□ -0.77
VPS29-201ENST00000360579 DENRO43583 198 aaKnown RBP10.24□□□□□ -0.77
VPS29-201ENST00000360579 SLC22A5O76082 557 aa10.24□□□□□ -0.77
VPS29-201ENST00000360579 KBTBD11O94819 623 aa10.24□□□□□ -0.77
VPS29-201ENST00000360579 IL6RP08887 468 aaPredicted RBP10.24□□□□□ -0.77
VPS29-201ENST00000360579 ZNF735P0CB33 412 aa10.24□□□□□ -0.77
VPS29-201ENST00000360579 DEFA4P12838 97 aa10.24□□□□□ -0.77
VPS29-201ENST00000360579 CD36P16671 472 aa10.24□□□□□ -0.77
VPS29-201ENST00000360579 RBMS2Q15434 407 aaKnown RBP10.24□□□□□ -0.77
VPS29-201ENST00000360579 UNQ9165/PRO28630Q6UXU0 137 aa10.24□□□□□ -0.77
VPS29-201ENST00000360579 C19orf35Q6ZS72 473 aa10.24□□□□□ -0.77
VPS29-201ENST00000360579 KCTD9Q7L273 389 aa10.24□□□□□ -0.77
VPS29-201ENST00000360579 H1FOOQ8IZA3 346 aaPredicted RBP10.24□□□□□ -0.77
VPS29-201ENST00000360579 ZNF645Q8N7E2 425 aa10.24□□□□□ -0.77
VPS29-201ENST00000360579 MND1Q9BWT6 205 aa10.24□□□□□ -0.77
VPS29-201ENST00000360579 MAP6D1Q9H9H5 199 aa10.24□□□□□ -0.77
VPS29-201ENST00000360579 PLCXD1Q9NUJ7 323 aa10.24□□□□□ -0.77
VPS29-201ENST00000360579 UBQLN2Q9UHD9 624 aa10.24□□□□□ -0.77
VPS29-201ENST00000360579 S4R3C0 116 aa10.24□□□□□ -0.77
VPS29-201ENST00000360579 DNAH2Q9P225 4427 aa10.24□□□□□ -0.77
VPS29-201ENST00000360579 OR4C46A6NHA9 309 aa10.23□□□□□ -0.77
VPS29-201ENST00000360579 CTRB1P17538 263 aa10.23□□□□□ -0.77
VPS29-201ENST00000360579 GADD45AP24522 165 aa10.23□□□□□ -0.77
VPS29-201ENST00000360579 PSMD7P51665 324 aa10.23□□□□□ -0.77
VPS29-201ENST00000360579 CTRB2Q6GPI1 263 aa10.23□□□□□ -0.77
VPS29-201ENST00000360579 DHRSXQ8N5I4 330 aa10.23□□□□□ -0.77
VPS29-201ENST00000360579 OR4S2Q8NH73 311 aa10.23□□□□□ -0.77
VPS29-201ENST00000360579 C11orf45Q8TAV5 145 aa10.23□□□□□ -0.77
VPS29-201ENST00000360579 TMEM167AQ8TBQ9 72 aa10.23□□□□□ -0.77
VPS29-201ENST00000360579 C2CD4CQ8TF44 421 aa10.23□□□□□ -0.77
VPS29-201ENST00000360579 FAM3DQ96BQ1 224 aa10.23□□□□□ -0.77
VPS29-201ENST00000360579 C8orf4Q9NR00 106 aa10.23□□□□□ -0.77
VPS29-201ENST00000360579 RAB22AQ9UL26 194 aa10.23□□□□□ -0.77
VPS29-201ENST00000360579 KCNK7Q9Y2U2 307 aa10.23□□□□□ -0.77
VPS29-201ENST00000360579 IGLV11-55A0A075B6I3 123 aa10.22□□□□□ -0.77
VPS29-201ENST00000360579 ARL6IP5O75915 188 aa10.22□□□□□ -0.77
VPS29-201ENST00000360579 AREGP15514 252 aa10.22□□□□□ -0.77
VPS29-201ENST00000360579 RPL35AP18077 110 aaKnown RBP10.22□□□□□ -0.77
VPS29-201ENST00000360579 GPR183P32249 361 aa10.22□□□□□ -0.77
VPS29-201ENST00000360579 TALDO1P37837 337 aa10.22□□□□□ -0.77
VPS29-201ENST00000360579 C2orf76Q3KRA6 126 aa10.22□□□□□ -0.77
VPS29-201ENST00000360579 ODF3L2Q3SX64 289 aa10.22□□□□□ -0.77
VPS29-201ENST00000360579 PLET1Q6UQ28 207 aa10.22□□□□□ -0.77
VPS29-201ENST00000360579 Q6ZS49 121 aa10.22□□□□□ -0.77
VPS29-201ENST00000360579 LINC00336Q6ZUF6 198 aa10.22□□□□□ -0.77
VPS29-201ENST00000360579 C8orf59Q8N0T1 100 aaPredicted RBP10.22□□□□□ -0.77
VPS29-201ENST00000360579 VKORC1L1Q8N0U8 176 aa10.22□□□□□ -0.77
VPS29-201ENST00000360579 MAFIPQ8WZ33 124 aa10.22□□□□□ -0.77
VPS29-201ENST00000360579 GFI1Q99684 422 aa10.22□□□□□ -0.77
VPS29-201ENST00000360579 ZNF436Q9C0F3 470 aaPredicted RBP10.22□□□□□ -0.77
VPS29-201ENST00000360579 C11orf68Q9H3H3 251 aaKnown RBP10.22□□□□□ -0.77
VPS29-201ENST00000360579 THYN1Q9P016 225 aa10.22□□□□□ -0.77
VPS29-201ENST00000360579 FBXL17Q9UF56 701 aa10.22□□□□□ -0.77
VPS29-201ENST00000360579 AK6Q9Y3D8 172 aaKnown RBP10.22□□□□□ -0.77
VPS29-201ENST00000360579 MFSD2BA6NFX1 497 aa10.21□□□□□ -0.77
VPS29-201ENST00000360579 E7EUB6 86 aa10.21□□□□□ -0.77
VPS29-201ENST00000360579 CLDN12P56749 244 aa10.21□□□□□ -0.77
VPS29-201ENST00000360579 NANOS2P60321 138 aaKnown RBP10.21□□□□□ -0.77
VPS29-201ENST00000360579 RPL8P62917 257 aaKnown RBP10.21□□□□□ -0.77
VPS29-201ENST00000360579 SPHARQ15513 63 aa10.21□□□□□ -0.77
VPS29-201ENST00000360579 OR2B11Q5JQS5 317 aa10.21□□□□□ -0.77
VPS29-201ENST00000360579 PUSL1Q8N0Z8 303 aaKnown RBP10.21□□□□□ -0.77
VPS29-201ENST00000360579 PACRGLQ8N7B6 248 aa10.21□□□□□ -0.77
VPS29-201ENST00000360579 BPIFB6Q8NFQ5 453 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms