RNA–Protein interactions for RNA: ENST00000360238.6

CUEDC1-201, Transcript of CUE domain containing 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CUEDC1, Length 2,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-201ENST00000360238 CORO2AQ92828 525 aa21.71■■□□□ 1.07
CUEDC1-201ENST00000360238 RPUSD4Q96CM3 377 aaKnown RBP21.71■■□□□ 1.07
CUEDC1-201ENST00000360238 MKRN2OSH3BPM6 223 aa21.7■■□□□ 1.06
CUEDC1-201ENST00000360238 IRF2P14316 349 aa21.7■■□□□ 1.06
CUEDC1-201ENST00000360238 MRPS11P82912 194 aaKnown RBP21.7■■□□□ 1.06
CUEDC1-201ENST00000360238 ADIRFQ15847 76 aa21.7■■□□□ 1.06
CUEDC1-201ENST00000360238 TREML4Q6UXN2 200 aa21.7■■□□□ 1.06
CUEDC1-201ENST00000360238 GATAD1Q8WUU5 269 aa21.7■■□□□ 1.06
CUEDC1-201ENST00000360238 CLN5O75503 358 aa21.7■■□□□ 1.06
CUEDC1-201ENST00000360238 HOXA5P20719 270 aa21.7■■□□□ 1.06
CUEDC1-201ENST00000360238 NEIL1Q96FI4 390 aaPredicted RBP21.7■■□□□ 1.06
CUEDC1-201ENST00000360238 RHOVQ96L33 236 aa21.7■■□□□ 1.06
CUEDC1-201ENST00000360238 POU2AF1Q16633 256 aa21.69■■□□□ 1.06
CUEDC1-201ENST00000360238 BSXQ3C1V8 233 aa21.69■■□□□ 1.06
CUEDC1-201ENST00000360238 CCL13Q99616 98 aa21.69■■□□□ 1.06
CUEDC1-201ENST00000360238 TMEM14BQ9NUH8 114 aa21.69■■□□□ 1.06
CUEDC1-201ENST00000360238 PAGE4O60829 102 aa21.68■■□□□ 1.06
CUEDC1-201ENST00000360238 OR4A47Q6IF82 309 aa21.68■■□□□ 1.06
CUEDC1-201ENST00000360238 SLC16A13Q7RTY0 426 aa21.68■■□□□ 1.06
CUEDC1-201ENST00000360238 LYG1Q8N1E2 194 aa21.68■■□□□ 1.06
CUEDC1-201ENST00000360238 FAM216BQ8N7L0 139 aa21.68■■□□□ 1.06
CUEDC1-201ENST00000360238 ZNF383Q8NA42 475 aa21.68■■□□□ 1.06
CUEDC1-201ENST00000360238 DEFB108BQ8NET1 73 aa21.68■■□□□ 1.06
CUEDC1-201ENST00000360238 TMEM170AQ8WVE7 144 aa21.68■■□□□ 1.06
CUEDC1-201ENST00000360238 SSX3Q99909 188 aa21.68■■□□□ 1.06
CUEDC1-201ENST00000360238 ELOVL5Q9NYP7 299 aa21.68■■□□□ 1.06
CUEDC1-201ENST00000360238 BOD1L1Q8NFC6 3051 aa21.68■■□□□ 1.06
CUEDC1-201ENST00000360238 GYPAP02724 150 aa21.68■■□□□ 1.06
CUEDC1-201ENST00000360238 RPL23P62829 140 aaKnown RBP21.68■■□□□ 1.06
CUEDC1-201ENST00000360238 NCMAPQ5T1S8 102 aa21.68■■□□□ 1.06
CUEDC1-201ENST00000360238 KCNIP2Q9NS61 270 aa21.68■■□□□ 1.06
CUEDC1-201ENST00000360238 DOK5Q9P104 306 aa21.68■■□□□ 1.06
CUEDC1-201ENST00000360238 PRRG2O14669 202 aa21.67■■□□□ 1.06
CUEDC1-201ENST00000360238 HIST1H2BKO60814 126 aa21.67■■□□□ 1.06
CUEDC1-201ENST00000360238 HIST1H2BJP06899 126 aa21.67■■□□□ 1.06
CUEDC1-201ENST00000360238 HIST1H2BOP23527 126 aa21.67■■□□□ 1.06
CUEDC1-201ENST00000360238 HIST1H2BBP33778 126 aa21.67■■□□□ 1.06
CUEDC1-201ENST00000360238 HIST1H2BDP58876 126 aa21.67■■□□□ 1.06
CUEDC1-201ENST00000360238 HIST1H2BCP62807 126 aa21.67■■□□□ 1.06
CUEDC1-201ENST00000360238 HIST2H2BEQ16778 126 aa21.67■■□□□ 1.06
CUEDC1-201ENST00000360238 HIST2H2BFQ5QNW6 126 aaPredicted RBP21.67■■□□□ 1.06
CUEDC1-201ENST00000360238 NANPQ8TBE9 248 aa21.67■■□□□ 1.06
CUEDC1-201ENST00000360238 HIST1H2BHQ93079 126 aa21.67■■□□□ 1.06
CUEDC1-201ENST00000360238 HIST1H2BNQ99877 126 aa21.67■■□□□ 1.06
CUEDC1-201ENST00000360238 HIST1H2BMQ99879 126 aa21.67■■□□□ 1.06
CUEDC1-201ENST00000360238 MS4A5Q9H3V2 200 aa21.67■■□□□ 1.06
CUEDC1-201ENST00000360238 A0A0G2JNJ9 132 aa21.67■■□□□ 1.06
CUEDC1-201ENST00000360238 TRGC2P03986 189 aa21.67■■□□□ 1.06
CUEDC1-201ENST00000360238 DEFA4P12838 97 aa21.67■■□□□ 1.06
CUEDC1-201ENST00000360238 TDGF1P3P51864 188 aa21.67■■□□□ 1.06
CUEDC1-201ENST00000360238 HSPE1P61604 102 aaKnown RBP21.67■■□□□ 1.06
CUEDC1-201ENST00000360238 MGST2Q99735 147 aa21.67■■□□□ 1.06
CUEDC1-201ENST00000360238 GGTLC1Q9BX51 225 aa21.67■■□□□ 1.06
CUEDC1-201ENST00000360238 Q9UFV3 132 aa21.67■■□□□ 1.06
CUEDC1-201ENST00000360238 C16orf97H3BN30 126 aa21.66■■□□□ 1.06
CUEDC1-201ENST00000360238 HRASP01112 189 aa21.66■■□□□ 1.06
CUEDC1-201ENST00000360238 TNFRSF1AP19438 455 aa21.66■■□□□ 1.06
CUEDC1-201ENST00000360238 CDX1P47902 265 aaPredicted RBP21.66■■□□□ 1.06
CUEDC1-201ENST00000360238 DOLPP1Q86YN1 238 aa21.66■■□□□ 1.06
CUEDC1-201ENST00000360238 ABHD12Q8N2K0 398 aa21.66■■□□□ 1.06
CUEDC1-201ENST00000360238 RPUSD1Q9UJJ7 312 aaKnown RBP21.66■■□□□ 1.06
CUEDC1-201ENST00000360238 TRAV38-1A0A0B4J264 116 aa21.65■■□□□ 1.06
CUEDC1-201ENST00000360238 A0A1W2PPV4 95 aa21.65■■□□□ 1.06
CUEDC1-201ENST00000360238 C11orf94C9JXX5 98 aa21.65■■□□□ 1.06
CUEDC1-201ENST00000360238 YIF1AO95070 293 aa21.65■■□□□ 1.06
CUEDC1-201ENST00000360238 NBL1P41271 181 aa21.65■■□□□ 1.06
CUEDC1-201ENST00000360238 GCSAMLQ5JQS6 135 aa21.65■■□□□ 1.06
CUEDC1-201ENST00000360238 NKX6-3A6NJ46 265 aa21.65■■□□□ 1.06
CUEDC1-201ENST00000360238 VENTXO95231 258 aa21.65■■□□□ 1.06
CUEDC1-201ENST00000360238 NDUFA6P56556 154 aa21.65■■□□□ 1.06
CUEDC1-201ENST00000360238 SLC25A48Q6ZT89 311 aaKnown RBP21.65■■□□□ 1.06
CUEDC1-201ENST00000360238 C16orf82Q7Z2V1 217 aa21.65■■□□□ 1.06
CUEDC1-201ENST00000360238 SLC24A4Q8NFF2 622 aa21.65■■□□□ 1.06
CUEDC1-201ENST00000360238 LSM4Q9Y4Z0 139 aaKnown RBP21.65■■□□□ 1.06
CUEDC1-201ENST00000360238 ICE1Q9Y2F5 2266 aa21.65■■□□□ 1.06
CUEDC1-201ENST00000360238 hADV38S2A0JD32 116 aa21.64■■□□□ 1.06
CUEDC1-201ENST00000360238 PDE6DO43924 150 aa21.64■■□□□ 1.06
CUEDC1-201ENST00000360238 LINC00312Q9Y6C7 94 aa21.64■■□□□ 1.06
CUEDC1-201ENST00000360238 PXMP4Q9Y6I8 212 aa21.64■■□□□ 1.06
CUEDC1-201ENST00000360238 NPY1RP25929 384 aa21.64■■□□□ 1.05
CUEDC1-201ENST00000360238 GNG10P50151 68 aa21.64■■□□□ 1.05
CUEDC1-201ENST00000360238 ZCCHC14Q8WYQ9 949 aaKnown RBP21.64■■□□□ 1.05
CUEDC1-201ENST00000360238 NPVFQ9HCQ7 196 aa21.64■■□□□ 1.05
CUEDC1-201ENST00000360238 ENY2Q9NPA8 101 aa21.64■■□□□ 1.05
CUEDC1-201ENST00000360238 SSX8Q7RTT4 187 aa21.63■■□□□ 1.05
CUEDC1-201ENST00000360238 OR10A7Q8NGE5 316 aa21.63■■□□□ 1.05
CUEDC1-201ENST00000360238 PYGO2Q9BRQ0 406 aa21.63■■□□□ 1.05
CUEDC1-201ENST00000360238 PRNDQ9UKY0 176 aa21.63■■□□□ 1.05
CUEDC1-201ENST00000360238 NBEAQ8NFP9 2946 aa21.62■■□□□ 1.05
CUEDC1-201ENST00000360238 C17orf100A8MU93 164 aa21.62■■□□□ 1.05
CUEDC1-201ENST00000360238 PFN1P07737 140 aaKnown RBP21.62■■□□□ 1.05
CUEDC1-201ENST00000360238 ADIPOQQ15848 244 aa21.62■■□□□ 1.05
CUEDC1-201ENST00000360238 WFDC8Q8IUA0 241 aa21.62■■□□□ 1.05
CUEDC1-201ENST00000360238 TGIF2LYQ8IUE0 185 aa21.62■■□□□ 1.05
CUEDC1-201ENST00000360238 ANAPC16Q96DE5 110 aa21.62■■□□□ 1.05
CUEDC1-201ENST00000360238 DCAF16Q9NXF7 216 aa21.62■■□□□ 1.05
CUEDC1-201ENST00000360238 AKAP13Q12802 2813 aa21.62■■□□□ 1.05
CUEDC1-201ENST00000360238 H7BYZ3 331 aa21.61■■□□□ 1.05
CUEDC1-201ENST00000360238 MMP23AO75900 390 aa21.61■■□□□ 1.05
CUEDC1-201ENST00000360238 IL6RP08887 468 aaPredicted RBP21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms