RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 FAM89BQ8N5H3 189 aa11.64□□□□□ -0.55
VCP-201ENST00000358901 TMEM45BQ96B21 275 aa11.64□□□□□ -0.55
VCP-201ENST00000358901 LPAR2Q9HBW0 351 aa11.64□□□□□ -0.55
VCP-201ENST00000358901 IDI2-AS1Q9NZ38 188 aa11.64□□□□□ -0.55
VCP-201ENST00000358901 ZNF716A6NP11 495 aa11.64□□□□□ -0.55
VCP-201ENST00000358901 C17orf98A8MV24 154 aa11.64□□□□□ -0.55
VCP-201ENST00000358901 LRRC75BQ2VPJ9 315 aa11.64□□□□□ -0.55
VCP-201ENST00000358901 CYP2G1PQ6ZSU1 146 aa11.64□□□□□ -0.55
VCP-201ENST00000358901 LYZL4Q96KX0 146 aa11.64□□□□□ -0.55
VCP-201ENST00000358901 PRDM6Q9NQX0 595 aa11.64□□□□□ -0.55
VCP-201ENST00000358901 FOXJ2Q9P0K8 574 aa11.64□□□□□ -0.55
VCP-201ENST00000358901 F8VVB4 439 aa11.64□□□□□ -0.55
VCP-201ENST00000358901 F8VWA3 439 aa11.64□□□□□ -0.55
VCP-201ENST00000358901 DOLPP1Q86YN1 238 aa11.64□□□□□ -0.55
VCP-201ENST00000358901 STPG3Q8N7X2 389 aa11.64□□□□□ -0.55
VCP-201ENST00000358901 SFRP2Q96HF1 295 aa11.64□□□□□ -0.55
VCP-201ENST00000358901 NPCDR1Q9BY65 106 aa11.64□□□□□ -0.55
VCP-201ENST00000358901 GCHFRP30047 84 aa11.63□□□□□ -0.55
VCP-201ENST00000358901 Q6ZT83 130 aa11.63□□□□□ -0.55
VCP-201ENST00000358901 MUC15Q8N387 334 aa11.63□□□□□ -0.55
VCP-201ENST00000358901 NPIPB3Q92617 1050 aa11.63□□□□□ -0.55
VCP-201ENST00000358901 RPL7P18124 248 aaKnown RBP11.63□□□□□ -0.55
VCP-201ENST00000358901 HINT1P49773 126 aaPredicted RBP11.63□□□□□ -0.55
VCP-201ENST00000358901 HOXA4Q00056 320 aaPredicted RBP11.63□□□□□ -0.55
VCP-201ENST00000358901 STPG1Q5TH74 334 aa11.63□□□□□ -0.55
VCP-201ENST00000358901 SCGB1D4Q6XE38 83 aa11.63□□□□□ -0.55
VCP-201ENST00000358901 SLC25A33Q9BSK2 321 aa11.63□□□□□ -0.55
VCP-201ENST00000358901 SSBP3Q9BWW4 388 aaPredicted RBP11.63□□□□□ -0.55
VCP-201ENST00000358901 FGF16O43320 207 aa11.63□□□□□ -0.55
VCP-201ENST00000358901 C21orf62-AS1Q17RA5 79 aa11.63□□□□□ -0.55
VCP-201ENST00000358901 OR4B1Q8NGF8 309 aa11.63□□□□□ -0.55
VCP-201ENST00000358901 DCTN5Q9BTE1 182 aa11.63□□□□□ -0.55
VCP-201ENST00000358901 EFNA2O43921 213 aa11.63□□□□□ -0.55
VCP-201ENST00000358901 REG1AP05451 166 aa11.63□□□□□ -0.55
VCP-201ENST00000358901 UMODP07911 640 aa11.63□□□□□ -0.55
VCP-201ENST00000358901 SPATA45Q537H7 98 aa11.63□□□□□ -0.55
VCP-201ENST00000358901 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.63□□□□□ -0.55
VCP-201ENST00000358901 WBP1Q96G27 269 aa11.63□□□□□ -0.55
VCP-201ENST00000358901 SBF1O95248 1867 aa11.62□□□□□ -0.55
VCP-201ENST00000358901 J3QW42 95 aa11.62□□□□□ -0.55
VCP-201ENST00000358901 PSG7Q13046 419 aa11.62□□□□□ -0.55
VCP-201ENST00000358901 GSN-AS1Q9NRJ2 163 aa11.62□□□□□ -0.55
VCP-201ENST00000358901 SOD3P08294 240 aa11.62□□□□□ -0.55
VCP-201ENST00000358901 BMI1P35226 326 aa11.62□□□□□ -0.55
VCP-201ENST00000358901 CFHR1Q03591 330 aa11.62□□□□□ -0.55
VCP-201ENST00000358901 TFF3Q07654 80 aa11.62□□□□□ -0.55
VCP-201ENST00000358901 TMEM183AQ8IXX5 376 aa11.62□□□□□ -0.55
VCP-201ENST00000358901 OR51G1Q8NGK1 321 aa11.62□□□□□ -0.55
VCP-201ENST00000358901 ZNF407Q9C0G0 2248 aa11.62□□□□□ -0.55
VCP-201ENST00000358901 BDP1A6H8Y1 2624 aa11.62□□□□□ -0.55
VCP-201ENST00000358901 CCL1P22362 96 aa11.62□□□□□ -0.55
VCP-201ENST00000358901 TMEM177Q53S58 311 aa11.62□□□□□ -0.55
VCP-201ENST00000358901 DIRC2Q96SL1 478 aa11.62□□□□□ -0.55
VCP-201ENST00000358901 HSPB7Q9UBY9 170 aa11.62□□□□□ -0.55
VCP-201ENST00000358901 TMEM56-RWDD3S4R434 201 aa11.62□□□□□ -0.55
VCP-201ENST00000358901 SCN8AQ9UQD0 1980 aa11.62□□□□□ -0.55
VCP-201ENST00000358901 LEPROTL1O95214 131 aa11.61□□□□□ -0.55
VCP-201ENST00000358901 CENPWQ5EE01 88 aa11.61□□□□□ -0.55
VCP-201ENST00000358901 FDCSPQ8NFU4 85 aa11.61□□□□□ -0.55
VCP-201ENST00000358901 MRPL37Q9BZE1 423 aaKnown RBP11.61□□□□□ -0.55
VCP-201ENST00000358901 ZDHHC8Q9ULC8 765 aa11.61□□□□□ -0.55
VCP-201ENST00000358901 CCL21O00585 134 aa11.61□□□□□ -0.55
VCP-201ENST00000358901 VENTXO95231 258 aa11.61□□□□□ -0.55
VCP-201ENST00000358901 CA2P00918 260 aa11.61□□□□□ -0.55
VCP-201ENST00000358901 CECR9P0C854 216 aa11.61□□□□□ -0.55
VCP-201ENST00000358901 OTX1P32242 354 aaPredicted RBP11.61□□□□□ -0.55
VCP-201ENST00000358901 CCDC144NLQ6NUI1 221 aa11.61□□□□□ -0.55
VCP-201ENST00000358901 ZNF525Q8N782 197 aa11.61□□□□□ -0.55
VCP-201ENST00000358901 OR13A1Q8NGR1 328 aa11.61□□□□□ -0.55
VCP-201ENST00000358901 CLDND2Q8NHS1 167 aa11.61□□□□□ -0.55
VCP-201ENST00000358901 GATAD1Q8WUU5 269 aa11.61□□□□□ -0.55
VCP-201ENST00000358901 PGLYRP4Q96LB8 373 aa11.61□□□□□ -0.55
VCP-201ENST00000358901 RNF224P0DH78 156 aa11.61□□□□□ -0.55
VCP-201ENST00000358901 FAM201AQ5SY85 155 aa11.61□□□□□ -0.55
VCP-201ENST00000358901 OR4A5Q8NH83 315 aa11.61□□□□□ -0.55
VCP-201ENST00000358901 NMUP48645 174 aa11.6□□□□□ -0.55
VCP-201ENST00000358901 ERVFRD-1P60508 538 aa11.6□□□□□ -0.55
VCP-201ENST00000358901 SPANXN1Q5VSR9 72 aa11.6□□□□□ -0.55
VCP-201ENST00000358901 ABLIM2Q6H8Q1 611 aa11.6□□□□□ -0.55
VCP-201ENST00000358901 ATOH7Q8N100 152 aa11.6□□□□□ -0.55
VCP-201ENST00000358901 OR4C13Q8NGP0 309 aa11.6□□□□□ -0.55
VCP-201ENST00000358901 EAF1Q96JC9 268 aaPredicted RBP11.6□□□□□ -0.55
VCP-201ENST00000358901 HEATR1Q9H583 2144 aaKnown RBP11.6□□□□□ -0.55
VCP-201ENST00000358901 LNP1A1A4G5 178 aa11.6□□□□□ -0.55
VCP-201ENST00000358901 SLC17A3O00476 420 aa11.6□□□□□ -0.55
VCP-201ENST00000358901 CTSSP25774 331 aa11.6□□□□□ -0.55
VCP-201ENST00000358901 ACP7Q6ZNF0 438 aa11.6□□□□□ -0.55
VCP-201ENST00000358901 TMEM208Q9BTX3 173 aa11.6□□□□□ -0.55
VCP-201ENST00000358901 SFXN3Q9BWM7 321 aa11.6□□□□□ -0.55
VCP-201ENST00000358901 UQCR10Q9UDW1 63 aa11.6□□□□□ -0.55
VCP-201ENST00000358901 A6NDN8 102 aa11.6□□□□□ -0.55
VCP-201ENST00000358901 LINC00587B1AMM8 73 aa11.6□□□□□ -0.55
VCP-201ENST00000358901 HTN1P15515 57 aa11.6□□□□□ -0.55
VCP-201ENST00000358901 MPZP25189 248 aa11.6□□□□□ -0.55
VCP-201ENST00000358901 CCL20P78556 96 aa11.6□□□□□ -0.55
VCP-201ENST00000358901 ZNF738Q8NE65 137 aa11.6□□□□□ -0.55
VCP-201ENST00000358901 PRR7Q8TB68 274 aa11.6□□□□□ -0.55
VCP-201ENST00000358901 FAM117AQ9C073 453 aa11.6□□□□□ -0.55
VCP-201ENST00000358901 FANCMQ8IYD8 2048 aa11.6□□□□□ -0.55
VCP-201ENST00000358901 A0A1B0GV90 55 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms