RNA–Protein interactions for RNA: ENST00000358525.8

SLC6A20-202, Transcript of solute carrier family 6 member 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A20, Length 5,423 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A20-202ENST00000358525 Q0VFX4 171 aa12.34□□□□□ -0.43
SLC6A20-202ENST00000358525 FAM216BQ8N7L0 139 aa12.34□□□□□ -0.43
SLC6A20-202ENST00000358525 THADAQ6YHU6 1953 aa12.34□□□□□ -0.43
SLC6A20-202ENST00000358525 LOC105371267A0A1B0GV96 52 aa12.34□□□□□ -0.43
SLC6A20-202ENST00000358525 SRP19P09132 144 aaKnown RBP12.34□□□□□ -0.43
SLC6A20-202ENST00000358525 DNAJC4Q9NNZ3 241 aa12.34□□□□□ -0.43
SLC6A20-202ENST00000358525 PLXNA4Q9HCM2 1894 aa12.34□□□□□ -0.43
SLC6A20-202ENST00000358525 PGPA6NDG6 321 aa12.34□□□□□ -0.43
SLC6A20-202ENST00000358525 TRGC1P0CF51 173 aa12.34□□□□□ -0.43
SLC6A20-202ENST00000358525 UCNP55089 124 aa12.34□□□□□ -0.43
SLC6A20-202ENST00000358525 OR4C13Q8NGP0 309 aa12.34□□□□□ -0.43
SLC6A20-202ENST00000358525 NABP2Q9BQ15 211 aa12.34□□□□□ -0.43
SLC6A20-202ENST00000358525 SEMA5BQ9P283 1151 aa12.34□□□□□ -0.43
SLC6A20-202ENST00000358525 NUBP1P53384 320 aa12.34□□□□□ -0.43
SLC6A20-202ENST00000358525 SUPT4H1P63272 117 aaKnown RBP12.34□□□□□ -0.43
SLC6A20-202ENST00000358525 OR9G1Q8NH87 305 aa12.34□□□□□ -0.43
SLC6A20-202ENST00000358525 TBX15Q96SF7 602 aa12.34□□□□□ -0.43
SLC6A20-202ENST00000358525 PPIAL4CA0A0B4J2A2 164 aa12.33□□□□□ -0.43
SLC6A20-202ENST00000358525 NDUFA2O43678 99 aa12.33□□□□□ -0.43
SLC6A20-202ENST00000358525 C8orf88P0DMB2 117 aa12.33□□□□□ -0.43
SLC6A20-202ENST00000358525 PPIAL4GP0DN37 164 aa12.33□□□□□ -0.43
SLC6A20-202ENST00000358525 LHFPL1Q86WI0 220 aa12.33□□□□□ -0.43
SLC6A20-202ENST00000358525 PLXNA2O75051 1894 aa12.33□□□□□ -0.44
SLC6A20-202ENST00000358525 BMI1P35226 326 aa12.33□□□□□ -0.44
SLC6A20-202ENST00000358525 PCSK4Q6UW60 755 aa12.33□□□□□ -0.44
SLC6A20-202ENST00000358525 F5H697 171 aa12.33□□□□□ -0.44
SLC6A20-202ENST00000358525 CD40P25942 277 aa12.33□□□□□ -0.44
SLC6A20-202ENST00000358525 ZNF525Q8N782 197 aa12.33□□□□□ -0.44
SLC6A20-202ENST00000358525 RNF115Q9Y4L5 304 aa12.33□□□□□ -0.44
SLC6A20-202ENST00000358525 IGHV1-69-2A0A0G2JMI3 117 aa12.33□□□□□ -0.44
SLC6A20-202ENST00000358525 FAM87AP0C7U9 286 aa12.33□□□□□ -0.44
SLC6A20-202ENST00000358525 SS18L1O75177 396 aaPredicted RBP12.32□□□□□ -0.44
SLC6A20-202ENST00000358525 GCHFRP30047 84 aa12.32□□□□□ -0.44
SLC6A20-202ENST00000358525 SPSB4Q96A44 273 aa12.32□□□□□ -0.44
SLC6A20-202ENST00000358525 SNRNP40Q96DI7 357 aaKnown RBP12.32□□□□□ -0.44
SLC6A20-202ENST00000358525 WFDC1Q9HC57 220 aa12.32□□□□□ -0.44
SLC6A20-202ENST00000358525 IL6RP08887 468 aaPredicted RBP12.32□□□□□ -0.44
SLC6A20-202ENST00000358525 TMEM186Q96B77 213 aa12.32□□□□□ -0.44
SLC6A20-202ENST00000358525 TMEM191AQ9H0A3 160 aa12.32□□□□□ -0.44
SLC6A20-202ENST00000358525 GSX1Q9H4S2 264 aaPredicted RBP12.32□□□□□ -0.44
SLC6A20-202ENST00000358525 H3BTX0 84 aa12.32□□□□□ -0.44
SLC6A20-202ENST00000358525 CORTO00230 105 aa12.32□□□□□ -0.44
SLC6A20-202ENST00000358525 RRHO14718 337 aa12.32□□□□□ -0.44
SLC6A20-202ENST00000358525 FGF16O43320 207 aa12.32□□□□□ -0.44
SLC6A20-202ENST00000358525 CD81P60033 236 aa12.32□□□□□ -0.44
SLC6A20-202ENST00000358525 ZNF497Q6ZNH5 498 aa12.32□□□□□ -0.44
SLC6A20-202ENST00000358525 NPIPB3Q92617 1050 aa12.32□□□□□ -0.44
SLC6A20-202ENST00000358525 HSPB9Q9BQS6 159 aa12.32□□□□□ -0.44
SLC6A20-202ENST00000358525 TMPRSS3P57727 454 aa12.32□□□□□ -0.44
SLC6A20-202ENST00000358525 CLDND2Q8NHS1 167 aa12.32□□□□□ -0.44
SLC6A20-202ENST00000358525 MRPL18Q9H0U6 180 aaKnown RBP12.32□□□□□ -0.44
SLC6A20-202ENST00000358525 CDX1P47902 265 aaPredicted RBP12.32□□□□□ -0.44
SLC6A20-202ENST00000358525 ARF6P62330 175 aa12.32□□□□□ -0.44
SLC6A20-202ENST00000358525 QRFPP83859 136 aa12.32□□□□□ -0.44
SLC6A20-202ENST00000358525 SGK494Q96LW2 274 aa12.32□□□□□ -0.44
SLC6A20-202ENST00000358525 SCNM1Q9BWG6 230 aa12.32□□□□□ -0.44
SLC6A20-202ENST00000358525 MAP1LC3CQ9BXW4 147 aa12.32□□□□□ -0.44
SLC6A20-202ENST00000358525 IGKV3D-15A0A087WSY6 115 aa12.31□□□□□ -0.44
SLC6A20-202ENST00000358525 DIRC3C9JPN6 131 aa12.31□□□□□ -0.44
SLC6A20-202ENST00000358525 BMPR1BO00238 502 aa12.31□□□□□ -0.44
SLC6A20-202ENST00000358525 WISP1O95388 367 aa12.31□□□□□ -0.44
SLC6A20-202ENST00000358525 CD59P13987 128 aa12.31□□□□□ -0.44
SLC6A20-202ENST00000358525 PEAR1Q5VY43 1037 aaPredicted RBP12.31□□□□□ -0.44
SLC6A20-202ENST00000358525 OR4A47Q6IF82 309 aa12.31□□□□□ -0.44
SLC6A20-202ENST00000358525 LINC01560Q8TB33 94 aa12.31□□□□□ -0.44
SLC6A20-202ENST00000358525 ELOVL5Q9NYP7 299 aa12.31□□□□□ -0.44
SLC6A20-202ENST00000358525 TMEM250H0YL14 139 aa12.31□□□□□ -0.44
SLC6A20-202ENST00000358525 RAMP3O60896 148 aa12.31□□□□□ -0.44
SLC6A20-202ENST00000358525 EAF1Q96JC9 268 aaPredicted RBP12.31□□□□□ -0.44
SLC6A20-202ENST00000358525 WFIKKN1Q96NZ8 548 aa12.31□□□□□ -0.44
SLC6A20-202ENST00000358525 TMEM30BQ3MIR4 351 aa12.31□□□□□ -0.44
SLC6A20-202ENST00000358525 SFRP2Q96HF1 295 aa12.31□□□□□ -0.44
SLC6A20-202ENST00000358525 OR51M1Q9H341 326 aa12.31□□□□□ -0.44
SLC6A20-202ENST00000358525 ZNF324BQ6AW86 544 aaPredicted RBP12.3□□□□□ -0.44
SLC6A20-202ENST00000358525 OR4D5Q8NGN0 318 aa12.3□□□□□ -0.44
SLC6A20-202ENST00000358525 OR5R1Q8NH85 324 aa12.3□□□□□ -0.44
SLC6A20-202ENST00000358525 TANC1Q9C0D5 1861 aa12.3□□□□□ -0.44
SLC6A20-202ENST00000358525 GVINP1Q7Z2Y8 2422 aa12.3□□□□□ -0.44
SLC6A20-202ENST00000358525 KBTBD11-OT1A0A1B0GTJ5 212 aa12.3□□□□□ -0.44
SLC6A20-202ENST00000358525 A8MWL6 223 aa12.3□□□□□ -0.44
SLC6A20-202ENST00000358525 GFRA1P56159 465 aa12.3□□□□□ -0.44
SLC6A20-202ENST00000358525 WDR82Q6UXN9 313 aa12.3□□□□□ -0.44
SLC6A20-202ENST00000358525 PAFAH1B2P68402 229 aa12.3□□□□□ -0.44
SLC6A20-202ENST00000358525 RTTNQ86VV8 2226 aa12.3□□□□□ -0.44
SLC6A20-202ENST00000358525 MT-ND6P03923 174 aa12.3□□□□□ -0.44
SLC6A20-202ENST00000358525 PRSS1P07477 247 aa12.3□□□□□ -0.44
SLC6A20-202ENST00000358525 ZNF385CQ66K41 422 aaPredicted RBP12.3□□□□□ -0.44
SLC6A20-202ENST00000358525 C19orf35Q6ZS72 473 aa12.3□□□□□ -0.44
SLC6A20-202ENST00000358525 OR4C5Q8NGB2 326 aa12.3□□□□□ -0.44
SLC6A20-202ENST00000358525 OR4A5Q8NH83 315 aa12.3□□□□□ -0.44
SLC6A20-202ENST00000358525 RBM14Q96PK6 669 aaKnown RBP12.3□□□□□ -0.44
SLC6A20-202ENST00000358525 TMEM106BQ9NUM4 274 aa12.3□□□□□ -0.44
SLC6A20-202ENST00000358525 ZNF581Q9P0T4 197 aa12.3□□□□□ -0.44
SLC6A20-202ENST00000358525 BSPH1Q075Z2 132 aa12.29□□□□□ -0.44
SLC6A20-202ENST00000358525 PNKDQ8N490 385 aa12.29□□□□□ -0.44
SLC6A20-202ENST00000358525 BET1LQ9NYM9 111 aa12.29□□□□□ -0.44
SLC6A20-202ENST00000358525 TCAPO15273 167 aa12.29□□□□□ -0.44
SLC6A20-202ENST00000358525 MOSP00540 346 aa12.29□□□□□ -0.44
SLC6A20-202ENST00000358525 IGFBP2P18065 325 aa12.29□□□□□ -0.44
SLC6A20-202ENST00000358525 TMEM171Q8WVE6 324 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms