RNA–Protein interactions for RNA: ENST00000357482.5

USP6-202, Transcript of ubiquitin specific peptidase 6, humanhuman

TSL 1 (best)

Gene USP6, Length 1,947 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6-202ENST00000357482 RELNP78509 3460 aa12.38□□□□□ -0.43
USP6-202ENST00000357482 LRRK2Q5S007 2527 aa12.38□□□□□ -0.43
USP6-202ENST00000357482 C7orf71A4D174 169 aa12.38□□□□□ -0.43
USP6-202ENST00000357482 FCN1O00602 326 aa12.38□□□□□ -0.43
USP6-202ENST00000357482 GP1BBP13224 206 aa12.38□□□□□ -0.43
USP6-202ENST00000357482 HOXB13Q92826 284 aaPredicted RBP12.38□□□□□ -0.43
USP6-202ENST00000357482 SFXN3Q9BWM7 321 aa12.38□□□□□ -0.43
USP6-202ENST00000357482 MRPL16Q9NX20 251 aaKnown RBP12.38□□□□□ -0.43
USP6-202ENST00000357482 IL36BQ9NZH7 164 aa12.38□□□□□ -0.43
USP6-202ENST00000357482 TAAR3PQ9P1P4 343 aa12.38□□□□□ -0.43
USP6-202ENST00000357482 SPENQ96T58 3664 aaKnown RBP12.38□□□□□ -0.43
USP6-202ENST00000357482 SSSCA1O60232 199 aa12.37□□□□□ -0.43
USP6-202ENST00000357482 CST7O76096 145 aa12.37□□□□□ -0.43
USP6-202ENST00000357482 NKX2-2O95096 273 aa12.37□□□□□ -0.43
USP6-202ENST00000357482 TTRP02766 147 aa12.37□□□□□ -0.43
USP6-202ENST00000357482 PNMTP11086 282 aa12.37□□□□□ -0.43
USP6-202ENST00000357482 EMDP50402 254 aa12.37□□□□□ -0.43
USP6-202ENST00000357482 ZNF90Q03938 601 aa12.37□□□□□ -0.43
USP6-202ENST00000357482 SP6Q3SY56 376 aa12.37□□□□□ -0.43
USP6-202ENST00000357482 ZNF324BQ6AW86 544 aaPredicted RBP12.37□□□□□ -0.43
USP6-202ENST00000357482 TCF23Q7RTU1 214 aa12.37□□□□□ -0.43
USP6-202ENST00000357482 BCORP1Q8N888 145 aa12.37□□□□□ -0.43
USP6-202ENST00000357482 DAZLQ92904 295 aaKnown RBP12.37□□□□□ -0.43
USP6-202ENST00000357482 PPP1R14AQ96A00 147 aa12.37□□□□□ -0.43
USP6-202ENST00000357482 PSMG3-AS1Q96PY0 264 aa12.37□□□□□ -0.43
USP6-202ENST00000357482 TXNDC17Q9BRA2 123 aa12.37□□□□□ -0.43
USP6-202ENST00000357482 FOXI3A8MTJ6 420 aaPredicted RBP12.37□□□□□ -0.43
USP6-202ENST00000357482 ZNF83P51522 516 aa12.37□□□□□ -0.43
USP6-202ENST00000357482 PLAURQ03405 335 aa12.37□□□□□ -0.43
USP6-202ENST00000357482 FOXI2Q6ZQN5 318 aa12.37□□□□□ -0.43
USP6-202ENST00000357482 ERASQ7Z444 233 aa12.37□□□□□ -0.43
USP6-202ENST00000357482 OR2K2Q8NGT1 345 aa12.37□□□□□ -0.43
USP6-202ENST00000357482 ZNF721Q8TF20 911 aa12.37□□□□□ -0.43
USP6-202ENST00000357482 CLEC7AQ9BXN2 247 aa12.37□□□□□ -0.43
USP6-202ENST00000357482 TRAPPC2LQ9UL33 140 aa12.37□□□□□ -0.43
USP6-202ENST00000357482 IGKV3D-11A0A0A0MRZ8 115 aa12.36□□□□□ -0.43
USP6-202ENST00000357482 CTXND1A0A1B0GTU2 59 aa12.36□□□□□ -0.43
USP6-202ENST00000357482 A1L4Q6 167 aa12.36□□□□□ -0.43
USP6-202ENST00000357482 ANKRD30BLA7E2S9 258 aa12.36□□□□□ -0.43
USP6-202ENST00000357482 CYSRT1A8MQ03 144 aa12.36□□□□□ -0.43
USP6-202ENST00000357482 HLA-DQA2P01906 255 aa12.36□□□□□ -0.43
USP6-202ENST00000357482 CBLN1P23435 193 aa12.36□□□□□ -0.43
USP6-202ENST00000357482 CRYBB3P26998 211 aa12.36□□□□□ -0.43
USP6-202ENST00000357482 FUT7Q11130 342 aa12.36□□□□□ -0.43
USP6-202ENST00000357482 ESPL1Q14674 2120 aa12.36□□□□□ -0.43
USP6-202ENST00000357482 LRRC75BQ2VPJ9 315 aa12.36□□□□□ -0.43
USP6-202ENST00000357482 ODF3L1Q8IXM7 274 aa12.36□□□□□ -0.43
USP6-202ENST00000357482 OR8B3Q8NGG8 313 aa12.36□□□□□ -0.43
USP6-202ENST00000357482 OR10G8Q8NGN5 311 aa12.36□□□□□ -0.43
USP6-202ENST00000357482 C1orf147Q96MC9 270 aaPredicted RBP12.36□□□□□ -0.43
USP6-202ENST00000357482 VSTM2LQ96N03 204 aa12.36□□□□□ -0.43
USP6-202ENST00000357482 OR8B2Q96RD0 313 aa12.36□□□□□ -0.43
USP6-202ENST00000357482 PKIBQ9C010 78 aa12.36□□□□□ -0.43
USP6-202ENST00000357482 MS4A6AQ9H2W1 248 aa12.36□□□□□ -0.43
USP6-202ENST00000357482 ANXA10Q9UJ72 324 aa12.36□□□□□ -0.43
USP6-202ENST00000357482 TNFRSF18Q9Y5U5 241 aa12.36□□□□□ -0.43
USP6-202ENST00000357482 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.35□□□□□ -0.43
USP6-202ENST00000357482 TRBV7-9A0A0J9YWB2 115 aa12.35□□□□□ -0.43
USP6-202ENST00000357482 LRP5LA4QPB2 252 aa12.35□□□□□ -0.43
USP6-202ENST00000357482 FAM231BA6NCW3 169 aa12.35□□□□□ -0.43
USP6-202ENST00000357482 SLC17A3O00476 420 aa12.35□□□□□ -0.43
USP6-202ENST00000357482 CLPSP04118 112 aa12.35□□□□□ -0.43
USP6-202ENST00000357482 PMCHP20382 165 aa12.35□□□□□ -0.43
USP6-202ENST00000357482 GNG4P50150 75 aa12.35□□□□□ -0.43
USP6-202ENST00000357482 OR2M3Q8NG83 312 aa12.35□□□□□ -0.43
USP6-202ENST00000357482 SPSB4Q96A44 273 aa12.35□□□□□ -0.43
USP6-202ENST00000357482 RAB40CQ96S21 281 aa12.35□□□□□ -0.43
USP6-202ENST00000357482 ERRFI1Q9UJM3 462 aaPredicted RBP12.35□□□□□ -0.43
USP6-202ENST00000357482 EMC9Q9Y3B6 208 aa12.35□□□□□ -0.43
USP6-202ENST00000357482 PRRC2CQ9Y520 2896 aaKnown RBP12.35□□□□□ -0.43
USP6-202ENST00000357482 PHF1O43189 567 aaPredicted RBP12.35□□□□□ -0.43
USP6-202ENST00000357482 ZNF17P17021 662 aa12.35□□□□□ -0.43
USP6-202ENST00000357482 ZNF20P17024 532 aa12.35□□□□□ -0.43
USP6-202ENST00000357482 NPY1RP25929 384 aa12.35□□□□□ -0.43
USP6-202ENST00000357482 ZNF133P52736 654 aaPredicted RBP12.35□□□□□ -0.43
USP6-202ENST00000357482 ZAR1Q86SH2 424 aa12.35□□□□□ -0.43
USP6-202ENST00000357482 OR51T1Q8NGJ9 327 aa12.35□□□□□ -0.43
USP6-202ENST00000357482 F2RL2O00254 374 aa12.34□□□□□ -0.43
USP6-202ENST00000357482 ASAH2BP0C7U1 165 aa12.34□□□□□ -0.43
USP6-202ENST00000357482 UBE2G1P62253 170 aa12.34□□□□□ -0.43
USP6-202ENST00000357482 ZNF766Q5HY98 468 aa12.34□□□□□ -0.43
USP6-202ENST00000357482 FAM162BQ5T6X4 162 aa12.34□□□□□ -0.43
USP6-202ENST00000357482 C16orf52Q8NHV5 167 aa12.34□□□□□ -0.43
USP6-202ENST00000357482 RAX2Q96IS3 184 aa12.34□□□□□ -0.43
USP6-202ENST00000357482 USP9XQ93008 2570 aaPredicted RBP12.33□□□□□ -0.43
USP6-202ENST00000357482 TRAV38-1A0A0B4J264 116 aa12.33□□□□□ -0.44
USP6-202ENST00000357482 RPS27P42677 84 aaKnown RBP12.33□□□□□ -0.44
USP6-202ENST00000357482 LGALS4P56470 323 aa12.33□□□□□ -0.44
USP6-202ENST00000357482 HBG1P69891 147 aa12.33□□□□□ -0.44
USP6-202ENST00000357482 HBG2P69892 147 aa12.33□□□□□ -0.44
USP6-202ENST00000357482 ZNF695Q8IW36 515 aa12.33□□□□□ -0.44
USP6-202ENST00000357482 VSTM2AQ8TAG5 236 aa12.33□□□□□ -0.44
USP6-202ENST00000357482 C18orf32Q8TCD1 76 aa12.33□□□□□ -0.44
USP6-202ENST00000357482 C10orf35Q96D05 121 aa12.33□□□□□ -0.44
USP6-202ENST00000357482 TMEM222Q9H0R3 208 aa12.33□□□□□ -0.44
USP6-202ENST00000357482 GP6Q9HCN6 339 aa12.33□□□□□ -0.44
USP6-202ENST00000357482 IL36GQ9NZH8 169 aa12.33□□□□□ -0.44
USP6-202ENST00000357482 THYN1Q9P016 225 aa12.33□□□□□ -0.44
USP6-202ENST00000357482 CPAMD8Q8IZJ3 1885 aa12.33□□□□□ -0.44
USP6-202ENST00000357482 COL12A1Q99715 3063 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms