RNA–Protein interactions for RNA: ENST00000357276.8

SMARCAL1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SMARCAL1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-201ENST00000357276 SPINK2P20155 84 aa10.06□□□□□ -0.8
SMARCAL1-201ENST00000357276 GCHFRP30047 84 aa10.06□□□□□ -0.8
SMARCAL1-201ENST00000357276 TSPOP30536 169 aa10.06□□□□□ -0.8
SMARCAL1-201ENST00000357276 HNRNPA3P51991 378 aaKnown RBP10.06□□□□□ -0.8
SMARCAL1-201ENST00000357276 FOXG1P55316 489 aaPredicted RBP10.06□□□□□ -0.8
SMARCAL1-201ENST00000357276 H2BFWTQ7Z2G1 175 aa10.06□□□□□ -0.8
SMARCAL1-201ENST00000357276 LYG1Q8N1E2 194 aa10.06□□□□□ -0.8
SMARCAL1-201ENST00000357276 FAM103A1Q9BTL3 118 aaKnown RBP10.06□□□□□ -0.8
SMARCAL1-201ENST00000357276 ARL2-SNX15V9GYD0 113 aa10.06□□□□□ -0.8
SMARCAL1-201ENST00000357276 USF3Q68DE3 2245 aa10.06□□□□□ -0.8
SMARCAL1-201ENST00000357276 DIDO1Q9BTC0 2240 aaKnown RBP10.06□□□□□ -0.8
SMARCAL1-201ENST00000357276 SDK2Q58EX2 2172 aa10.06□□□□□ -0.8
SMARCAL1-201ENST00000357276 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.06□□□□□ -0.8
SMARCAL1-201ENST00000357276 IGHV2-26A0A0B4J1V2 119 aa10.06□□□□□ -0.8
SMARCAL1-201ENST00000357276 FAM166BA8MTA8 275 aa10.06□□□□□ -0.8
SMARCAL1-201ENST00000357276 A8MXE2 369 aa10.06□□□□□ -0.8
SMARCAL1-201ENST00000357276 AMTP48728 403 aa10.06□□□□□ -0.8
SMARCAL1-201ENST00000357276 FREM1Q5H8C1 2179 aa10.06□□□□□ -0.8
SMARCAL1-201ENST00000357276 LYSMD4Q5XG99 296 aa10.06□□□□□ -0.8
SMARCAL1-201ENST00000357276 OR2D3Q8NGH3 330 aa10.06□□□□□ -0.8
SMARCAL1-201ENST00000357276 IGHV2OR16-5A0A0B4J2B6 119 aa10.06□□□□□ -0.8
SMARCAL1-201ENST00000357276 DPRXA6NFQ7 191 aa10.06□□□□□ -0.8
SMARCAL1-201ENST00000357276 FAM90A9PA6NNJ1 464 aa10.06□□□□□ -0.8
SMARCAL1-201ENST00000357276 MRPL33O75394 65 aaKnown RBP10.06□□□□□ -0.8
SMARCAL1-201ENST00000357276 COTL1Q14019 142 aa10.06□□□□□ -0.8
SMARCAL1-201ENST00000357276 SPINK9Q5DT21 86 aa10.06□□□□□ -0.8
SMARCAL1-201ENST00000357276 WIPI1Q5MNZ9 446 aaPredicted RBP10.06□□□□□ -0.8
SMARCAL1-201ENST00000357276 GUSBP11Q6P575 273 aa10.06□□□□□ -0.8
SMARCAL1-201ENST00000357276 C19orf35Q6ZS72 473 aa10.06□□□□□ -0.8
SMARCAL1-201ENST00000357276 OR8I2Q8N0Y5 310 aa10.06□□□□□ -0.8
SMARCAL1-201ENST00000357276 TAAR6Q96RI8 345 aa10.06□□□□□ -0.8
SMARCAL1-201ENST00000357276 GP6Q9HCN6 339 aa10.06□□□□□ -0.8
SMARCAL1-201ENST00000357276 DEPPQ9NTK1 212 aa10.06□□□□□ -0.8
SMARCAL1-201ENST00000357276 OCIAD1Q9NX40 245 aa10.06□□□□□ -0.8
SMARCAL1-201ENST00000357276 IGHV2-70DA0A0C4DH43 119 aa10.05□□□□□ -0.8
SMARCAL1-201ENST00000357276 LINC00473A8K010 186 aa10.05□□□□□ -0.8
SMARCAL1-201ENST00000357276 C12orf77C9JDV5 145 aa10.05□□□□□ -0.8
SMARCAL1-201ENST00000357276 SSPNQ14714 243 aa10.05□□□□□ -0.8
SMARCAL1-201ENST00000357276 IGFBP7Q16270 282 aa10.05□□□□□ -0.8
SMARCAL1-201ENST00000357276 FAM53AQ6NSI3 398 aaPredicted RBP10.05□□□□□ -0.8
SMARCAL1-201ENST00000357276 KLHDC1Q8N7A1 406 aa10.05□□□□□ -0.8
SMARCAL1-201ENST00000357276 OR5B3Q8NH48 314 aa10.05□□□□□ -0.8
SMARCAL1-201ENST00000357276 PILRBQ9UKJ0 227 aa10.05□□□□□ -0.8
SMARCAL1-201ENST00000357276 BMPR1BO00238 502 aa10.05□□□□□ -0.8
SMARCAL1-201ENST00000357276 ARR3P36575 388 aa10.05□□□□□ -0.8
SMARCAL1-201ENST00000357276 VDAC2P45880 294 aaPredicted RBP10.05□□□□□ -0.8
SMARCAL1-201ENST00000357276 RHOBP62745 196 aa10.05□□□□□ -0.8
SMARCAL1-201ENST00000357276 APH1AQ96BI3 265 aa10.05□□□□□ -0.8
SMARCAL1-201ENST00000357276 GALMQ96C23 342 aa10.05□□□□□ -0.8
SMARCAL1-201ENST00000357276 TXN2Q99757 166 aa10.05□□□□□ -0.8
SMARCAL1-201ENST00000357276 AQP7O14520 342 aa10.04□□□□□ -0.8
SMARCAL1-201ENST00000357276 OR9G9P0C7N8 305 aa10.04□□□□□ -0.8
SMARCAL1-201ENST00000357276 CA6P23280 308 aa10.04□□□□□ -0.8
SMARCAL1-201ENST00000357276 MIC13Q5XKP0 118 aa10.04□□□□□ -0.8
SMARCAL1-201ENST00000357276 SCCPDHQ8NBX0 429 aa10.04□□□□□ -0.8
SMARCAL1-201ENST00000357276 OR4F17Q8NGA8 305 aa10.04□□□□□ -0.8
SMARCAL1-201ENST00000357276 TSKUQ8WUA8 353 aa10.04□□□□□ -0.8
SMARCAL1-201ENST00000357276 MS4A5Q9H3V2 200 aa10.04□□□□□ -0.8
SMARCAL1-201ENST00000357276 GSX1Q9H4S2 264 aaPredicted RBP10.04□□□□□ -0.8
SMARCAL1-201ENST00000357276 NAT8BQ9UHF3 227 aa10.04□□□□□ -0.8
SMARCAL1-201ENST00000357276 NXPH2O95156 264 aa10.04□□□□□ -0.8
SMARCAL1-201ENST00000357276 CA2P00918 260 aa10.04□□□□□ -0.8
SMARCAL1-201ENST00000357276 RAC2P15153 192 aa10.04□□□□□ -0.8
SMARCAL1-201ENST00000357276 ZNF766Q5HY98 468 aa10.04□□□□□ -0.8
SMARCAL1-201ENST00000357276 PNKDQ8N490 385 aa10.04□□□□□ -0.8
SMARCAL1-201ENST00000357276 ZNF808Q8N4W9 903 aaPredicted RBP10.04□□□□□ -0.8
SMARCAL1-201ENST00000357276 ZNF738Q8NE65 137 aa10.04□□□□□ -0.8
SMARCAL1-201ENST00000357276 OR52L2PQ8NGH6 319 aa10.04□□□□□ -0.8
SMARCAL1-201ENST00000357276 OR4P4Q8NGL7 312 aa10.04□□□□□ -0.8
SMARCAL1-201ENST00000357276 OR52E5Q8NH55 327 aa10.04□□□□□ -0.8
SMARCAL1-201ENST00000357276 OSTCQ9NRP0 149 aa10.04□□□□□ -0.8
SMARCAL1-201ENST00000357276 CDC42EP3Q9UKI2 254 aa10.04□□□□□ -0.8
SMARCAL1-201ENST00000357276 LAMTOR5O43504 91 aa10.04□□□□□ -0.8
SMARCAL1-201ENST00000357276 EFNB3Q15768 340 aa10.04□□□□□ -0.8
SMARCAL1-201ENST00000357276 MCEMP1Q8IX19 187 aa10.04□□□□□ -0.8
SMARCAL1-201ENST00000357276 DUSP23Q9BVJ7 150 aa10.04□□□□□ -0.8
SMARCAL1-201ENST00000357276 MRPL27Q9P0M9 148 aaKnown RBP10.04□□□□□ -0.8
SMARCAL1-201ENST00000357276 CNTRLQ7Z7A1 2325 aa10.03□□□□□ -0.8
SMARCAL1-201ENST00000357276 A0A1W2PN81 502 aa10.03□□□□□ -0.8
SMARCAL1-201ENST00000357276 SMIM27A0A1W2PRY6 76 aa10.03□□□□□ -0.8
SMARCAL1-201ENST00000357276 GDF9O60383 454 aa10.03□□□□□ -0.8
SMARCAL1-201ENST00000357276 PSPNO60542 156 aa10.03□□□□□ -0.8
SMARCAL1-201ENST00000357276 P04436 131 aa10.03□□□□□ -0.8
SMARCAL1-201ENST00000357276 C9orf135Q5VTT2 229 aa10.03□□□□□ -0.8
SMARCAL1-201ENST00000357276 SEPSECSQ9HD40 501 aaKnown RBP10.03□□□□□ -0.8
SMARCAL1-201ENST00000357276 TET2Q6N021 2002 aaPredicted RBP10.03□□□□□ -0.8
SMARCAL1-201ENST00000357276 IGHV1-69-2A0A0G2JMI3 117 aa10.03□□□□□ -0.8
SMARCAL1-201ENST00000357276 IGLC7A0M8Q6 106 aa10.03□□□□□ -0.8
SMARCAL1-201ENST00000357276 CEACAM8P31997 349 aaPredicted RBP10.03□□□□□ -0.8
SMARCAL1-201ENST00000357276 SLC35E4Q6ICL7 350 aa10.03□□□□□ -0.8
SMARCAL1-201ENST00000357276 UNQ5815/PRO19632Q6UWF5 114 aa10.03□□□□□ -0.8
SMARCAL1-201ENST00000357276 C1orf210Q8IVY1 113 aa10.03□□□□□ -0.8
SMARCAL1-201ENST00000357276 HSD17B10Q99714 261 aaKnown RBP10.03□□□□□ -0.8
SMARCAL1-201ENST00000357276 ALKBH7Q9BT30 221 aaPredicted RBP10.03□□□□□ -0.8
SMARCAL1-201ENST00000357276 SLC35D1Q9NTN3 355 aa10.03□□□□□ -0.8
SMARCAL1-201ENST00000357276 POLDIP2Q9Y2S7 368 aa10.03□□□□□ -0.8
SMARCAL1-201ENST00000357276 TMEM30CPA0ZSE6 113 aa10.02□□□□□ -0.8
SMARCAL1-201ENST00000357276 OOEPA6NGQ2 149 aa10.02□□□□□ -0.8
SMARCAL1-201ENST00000357276 GFRA3O60609 400 aa10.02□□□□□ -0.8
SMARCAL1-201ENST00000357276 HLA-DQA1P01909 254 aa10.02□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms