RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 SPCS1Q9Y6A9 102 aa13.18□□□□□ -0.3
RTN3-205ENST00000356000 IGKV1-27A0A075B6S5 117 aa13.17□□□□□ -0.3
RTN3-205ENST00000356000 A6NDN8 102 aa13.17□□□□□ -0.3
RTN3-205ENST00000356000 SYS1-DBNDD2H3BUS1 97 aa13.17□□□□□ -0.3
RTN3-205ENST00000356000 ZNF207O43670 478 aaKnown RBP13.17□□□□□ -0.3
RTN3-205ENST00000356000 USF1P22415 310 aaPredicted RBP13.17□□□□□ -0.3
RTN3-205ENST00000356000 LTC4SQ16873 150 aa13.17□□□□□ -0.3
RTN3-205ENST00000356000 HNRNPA1L2Q32P51 320 aaKnown RBP13.17□□□□□ -0.3
RTN3-205ENST00000356000 SPACA3Q8IXA5 215 aa13.17□□□□□ -0.3
RTN3-205ENST00000356000 CLDN23Q96B33 292 aa13.17□□□□□ -0.3
RTN3-205ENST00000356000 PMCHL2Q9BQD1 86 aa13.17□□□□□ -0.3
RTN3-205ENST00000356000 IGKV1-5P01602 117 aa13.17□□□□□ -0.3
RTN3-205ENST00000356000 SP9P0CG40 484 aa13.17□□□□□ -0.3
RTN3-205ENST00000356000 HIST1H1EP10412 219 aaKnown RBP13.17□□□□□ -0.3
RTN3-205ENST00000356000 CEBPDP49716 269 aaPredicted RBP13.17□□□□□ -0.3
RTN3-205ENST00000356000 SLC35B1P78383 322 aa13.17□□□□□ -0.3
RTN3-205ENST00000356000 FAM120AOSQ5T036 256 aa13.17□□□□□ -0.3
RTN3-205ENST00000356000 OR2T6Q8NHC8 308 aa13.17□□□□□ -0.3
RTN3-205ENST00000356000 TMEM191AQ9H0A3 160 aa13.17□□□□□ -0.3
RTN3-205ENST00000356000 PRTFDC1Q9NRG1 225 aa13.17□□□□□ -0.3
RTN3-205ENST00000356000 PRUNE2Q8WUY3 3088 aa13.17□□□□□ -0.3
RTN3-205ENST00000356000 EDDM13A0A1B0GTR0 161 aa13.16□□□□□ -0.3
RTN3-205ENST00000356000 SLC31A1O15431 190 aa13.16□□□□□ -0.3
RTN3-205ENST00000356000 EML2O95834 649 aa13.16□□□□□ -0.3
RTN3-205ENST00000356000 RPL31P62899 125 aaKnown RBP13.16□□□□□ -0.3
RTN3-205ENST00000356000 MFAP5Q13361 173 aa13.16□□□□□ -0.3
RTN3-205ENST00000356000 CEACAM21Q3KPI0 293 aa13.16□□□□□ -0.3
RTN3-205ENST00000356000 SPSB4Q96A44 273 aa13.16□□□□□ -0.3
RTN3-205ENST00000356000 TMEM204Q9BSN7 226 aa13.16□□□□□ -0.3
RTN3-205ENST00000356000 COPS7AQ9UBW8 275 aa13.16□□□□□ -0.3
RTN3-205ENST00000356000 MUC6Q6W4X9 2439 aa13.16□□□□□ -0.3
RTN3-205ENST00000356000 TRGV10A0A0A0MS01 117 aa13.16□□□□□ -0.3
RTN3-205ENST00000356000 IGKV1-12A0A0C4DH73 117 aa13.16□□□□□ -0.3
RTN3-205ENST00000356000 A0A1W2PPM0 123 aa13.16□□□□□ -0.3
RTN3-205ENST00000356000 PMS2P5A8MQ11 134 aa13.16□□□□□ -0.3
RTN3-205ENST00000356000 IGKV1D-12P01611 117 aa13.16□□□□□ -0.3
RTN3-205ENST00000356000 SCTP09683 121 aa13.16□□□□□ -0.3
RTN3-205ENST00000356000 PVRP15151 417 aa13.16□□□□□ -0.3
RTN3-205ENST00000356000 PDCD1Q15116 288 aa13.16□□□□□ -0.3
RTN3-205ENST00000356000 PRR22Q8IZ63 422 aa13.16□□□□□ -0.3
RTN3-205ENST00000356000 OR51H1Q8NH63 302 aa13.16□□□□□ -0.3
RTN3-205ENST00000356000 LMX1AQ8TE12 382 aa13.16□□□□□ -0.3
RTN3-205ENST00000356000 OR2D2Q9H210 308 aa13.16□□□□□ -0.3
RTN3-205ENST00000356000 ZNF391Q9UJN7 358 aa13.16□□□□□ -0.3
RTN3-205ENST00000356000 SLC17A4Q9Y2C5 497 aa13.16□□□□□ -0.3
RTN3-205ENST00000356000 SPAG17Q6Q759 2223 aa13.16□□□□□ -0.3
RTN3-205ENST00000356000 TRAV38-1A0A0B4J264 116 aa13.15□□□□□ -0.3
RTN3-205ENST00000356000 FAM90A26D6RGX4 464 aa13.15□□□□□ -0.3
RTN3-205ENST00000356000 ADH4P08319 380 aa13.15□□□□□ -0.3
RTN3-205ENST00000356000 RNASEKQ6P5S7 137 aaKnown RBP13.15□□□□□ -0.3
RTN3-205ENST00000356000 C11orf52Q96A22 123 aa13.15□□□□□ -0.3
RTN3-205ENST00000356000 NAA38Q9BRA0 125 aaKnown RBP13.15□□□□□ -0.3
RTN3-205ENST00000356000 SAP30LQ9HAJ7 183 aa13.15□□□□□ -0.3
RTN3-205ENST00000356000 KCNIP1Q9NZI2 227 aa13.15□□□□□ -0.3
RTN3-205ENST00000356000 A0A1W2PQD3 144 aa13.15□□□□□ -0.3
RTN3-205ENST00000356000 CLDN1O95832 211 aa13.15□□□□□ -0.3
RTN3-205ENST00000356000 COX8AP10176 69 aa13.15□□□□□ -0.3
RTN3-205ENST00000356000 FOXE3Q13461 319 aa13.15□□□□□ -0.3
RTN3-205ENST00000356000 VWC2Q2TAL6 325 aa13.15□□□□□ -0.3
RTN3-205ENST00000356000 FA2HQ7L5A8 372 aa13.15□□□□□ -0.3
RTN3-205ENST00000356000 BPIFA4PQ86YQ2 179 aa13.15□□□□□ -0.3
RTN3-205ENST00000356000 OSTCQ9NRP0 149 aa13.15□□□□□ -0.3
RTN3-205ENST00000356000 TBC1D29Q9UFV1 150 aa13.15□□□□□ -0.3
RTN3-205ENST00000356000 LAMTOR5O43504 91 aa13.14□□□□□ -0.31
RTN3-205ENST00000356000 UQCRFS1P47985 274 aa13.14□□□□□ -0.31
RTN3-205ENST00000356000 ZNF718Q3SXZ3 478 aa13.14□□□□□ -0.31
RTN3-205ENST00000356000 SHISA6Q6ZSJ9 500 aa13.14□□□□□ -0.31
RTN3-205ENST00000356000 Q8N7P7 452 aa13.14□□□□□ -0.31
RTN3-205ENST00000356000 APOA2P02652 100 aa13.14□□□□□ -0.31
RTN3-205ENST00000356000 SLC25A47Q6Q0C1 308 aa13.14□□□□□ -0.31
RTN3-205ENST00000356000 OR10G6Q8NH81 332 aa13.14□□□□□ -0.31
RTN3-205ENST00000356000 OBP2AQ9NY56 170 aa13.14□□□□□ -0.31
RTN3-205ENST00000356000 C19orf25Q9UFG5 118 aaPredicted RBP13.14□□□□□ -0.31
RTN3-205ENST00000356000 BOKQ9UMX3 212 aaPredicted RBP13.14□□□□□ -0.31
RTN3-205ENST00000356000 A0A1W2PPV4 95 aa13.13□□□□□ -0.31
RTN3-205ENST00000356000 SMIM27A0A1W2PRY6 76 aa13.13□□□□□ -0.31
RTN3-205ENST00000356000 J3QR89 54 aa13.13□□□□□ -0.31
RTN3-205ENST00000356000 RBMXL2O75526 392 aaKnown RBP13.13□□□□□ -0.31
RTN3-205ENST00000356000 FBLP22087 321 aaKnown RBP13.13□□□□□ -0.31
RTN3-205ENST00000356000 CLRN1P58418 232 aa13.13□□□□□ -0.31
RTN3-205ENST00000356000 KIR3DS1Q14943 382 aa13.13□□□□□ -0.31
RTN3-205ENST00000356000 GCSAMLQ5JQS6 135 aa13.13□□□□□ -0.31
RTN3-205ENST00000356000 WIPF2Q8TF74 440 aaPredicted RBP13.13□□□□□ -0.31
RTN3-205ENST00000356000 DLL3Q9NYJ7 618 aa13.13□□□□□ -0.31
RTN3-205ENST00000356000 FRG2CA6NGY1 282 aa13.13□□□□□ -0.31
RTN3-205ENST00000356000 HBZP02008 142 aa13.13□□□□□ -0.31
RTN3-205ENST00000356000 ARL14EPLP0DKL9 152 aa13.13□□□□□ -0.31
RTN3-205ENST00000356000 TCL1AP56279 114 aa13.13□□□□□ -0.31
RTN3-205ENST00000356000 TMEM177Q53S58 311 aa13.13□□□□□ -0.31
RTN3-205ENST00000356000 NUDT22Q9BRQ3 303 aa13.13□□□□□ -0.31
RTN3-205ENST00000356000 MRPL16Q9NX20 251 aaKnown RBP13.13□□□□□ -0.31
RTN3-205ENST00000356000 YTHDF2Q9Y5A9 579 aaKnown RBP13.13□□□□□ -0.31
RTN3-205ENST00000356000 ADH5P11766 374 aa13.12□□□□□ -0.31
RTN3-205ENST00000356000 FABP6P51161 128 aa13.12□□□□□ -0.31
RTN3-205ENST00000356000 RBM11P57052 281 aaKnown RBP13.12□□□□□ -0.31
RTN3-205ENST00000356000 DAZAP2Q15038 168 aaPredicted RBP13.12□□□□□ -0.31
RTN3-205ENST00000356000 RASL11AQ6T310 242 aa13.12□□□□□ -0.31
RTN3-205ENST00000356000 TMEM251Q8N6I4 163 aa13.12□□□□□ -0.31
RTN3-205ENST00000356000 ZNF331Q9NQX6 463 aaPredicted RBP13.12□□□□□ -0.31
RTN3-205ENST00000356000 FGF21Q9NSA1 209 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms