RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 SCGB3A1Q96QR1 104 aa12.7□□□□□ -0.38
LMX1B-201ENST00000355497 TRAV24A0A0B4J272 114 aa12.7□□□□□ -0.38
LMX1B-201ENST00000355497 IGHV1-69-2A0A0G2JMI3 117 aa12.7□□□□□ -0.38
LMX1B-201ENST00000355497 ATP5LO75964 103 aa12.7□□□□□ -0.38
LMX1B-201ENST00000355497 C1QCP02747 245 aa12.7□□□□□ -0.38
LMX1B-201ENST00000355497 ACSF3Q4G176 576 aaPredicted RBP12.7□□□□□ -0.38
LMX1B-201ENST00000355497 NHLRC3Q5JS37 347 aa12.7□□□□□ -0.38
LMX1B-201ENST00000355497 PILRAQ9UKJ1 303 aa12.7□□□□□ -0.38
LMX1B-201ENST00000355497 ERGP11308 486 aa12.69□□□□□ -0.38
LMX1B-201ENST00000355497 DNASE2BQ8WZ79 361 aa12.69□□□□□ -0.38
LMX1B-201ENST00000355497 APOHP02749 345 aaPredicted RBP12.69□□□□□ -0.38
LMX1B-201ENST00000355497 NUTF2P61970 127 aaKnown RBP12.69□□□□□ -0.38
LMX1B-201ENST00000355497 ICAM4Q14773 271 aa12.69□□□□□ -0.38
LMX1B-201ENST00000355497 C1QTNF12Q5T7M4 302 aa12.69□□□□□ -0.38
LMX1B-201ENST00000355497 SAMD13Q5VXD3 122 aa12.69□□□□□ -0.38
LMX1B-201ENST00000355497 DRAM1Q8N682 238 aa12.69□□□□□ -0.38
LMX1B-201ENST00000355497 IL36BQ9NZH7 164 aa12.69□□□□□ -0.38
LMX1B-201ENST00000355497 SYNGR3O43761 229 aa12.69□□□□□ -0.38
LMX1B-201ENST00000355497 FUT5Q11128 374 aa12.69□□□□□ -0.38
LMX1B-201ENST00000355497 SMRP1Q8NCR6 262 aa12.69□□□□□ -0.38
LMX1B-201ENST00000355497 LRP5O75197 1615 aa12.68□□□□□ -0.38
LMX1B-201ENST00000355497 NKX2-8O15522 239 aa12.68□□□□□ -0.38
LMX1B-201ENST00000355497 WDR82Q6UXN9 313 aa12.68□□□□□ -0.38
LMX1B-201ENST00000355497 WNT10AQ9GZT5 417 aa12.68□□□□□ -0.38
LMX1B-201ENST00000355497 TMEM74BQ9NUR3 256 aa12.68□□□□□ -0.38
LMX1B-201ENST00000355497 IGKV1-8A0A0C4DH67 115 aa12.68□□□□□ -0.38
LMX1B-201ENST00000355497 ATXN7O15265 892 aaPredicted RBP12.68□□□□□ -0.38
LMX1B-201ENST00000355497 FHITP49789 147 aa12.68□□□□□ -0.38
LMX1B-201ENST00000355497 CD69Q07108 199 aa12.68□□□□□ -0.38
LMX1B-201ENST00000355497 TEX45Q8NA69 505 aa12.68□□□□□ -0.38
LMX1B-201ENST00000355497 SRXN1Q9BYN0 137 aa12.68□□□□□ -0.38
LMX1B-201ENST00000355497 MYO9BQ13459 2157 aa12.68□□□□□ -0.38
LMX1B-201ENST00000355497 M0R381 172 aa12.68□□□□□ -0.38
LMX1B-201ENST00000355497 FOXA3P55318 350 aaPredicted RBP12.68□□□□□ -0.38
LMX1B-201ENST00000355497 CYB5R2Q6BCY4 276 aa12.68□□□□□ -0.38
LMX1B-201ENST00000355497 CCL19Q99731 98 aa12.68□□□□□ -0.38
LMX1B-201ENST00000355497 NUP205Q92621 2012 aa12.68□□□□□ -0.38
LMX1B-201ENST00000355497 TRAV21A0A0B4J279 112 aa12.68□□□□□ -0.38
LMX1B-201ENST00000355497 IGHV3-48P01763 117 aa12.68□□□□□ -0.38
LMX1B-201ENST00000355497 CD200R1LQ6Q8B3 271 aa12.68□□□□□ -0.38
LMX1B-201ENST00000355497 TRPM3Q9HCF6 1732 aaPredicted RBP12.68□□□□□ -0.38
LMX1B-201ENST00000355497 IGHMP01871 453 aa12.68□□□□□ -0.38
LMX1B-201ENST00000355497 TRGV3P03979 118 aa12.68□□□□□ -0.38
LMX1B-201ENST00000355497 CFAP161Q6P656 301 aa12.68□□□□□ -0.38
LMX1B-201ENST00000355497 SLC22A18ASQ8N1D0 253 aa12.68□□□□□ -0.38
LMX1B-201ENST00000355497 WDYHV1Q96HA8 205 aa12.68□□□□□ -0.38
LMX1B-201ENST00000355497 NPCDR1Q9BY65 106 aa12.68□□□□□ -0.38
LMX1B-201ENST00000355497 DOCK1Q14185 1865 aa12.68□□□□□ -0.38
LMX1B-201ENST00000355497 C19orf67A6NJJ6 358 aa12.67□□□□□ -0.38
LMX1B-201ENST00000355497 IGHV3-23P01764 117 aa12.67□□□□□ -0.38
LMX1B-201ENST00000355497 FTH1P19P0C7X4 201 aa12.67□□□□□ -0.38
LMX1B-201ENST00000355497 CNTFRP26992 372 aa12.67□□□□□ -0.38
LMX1B-201ENST00000355497 GPX4P36969 197 aaPredicted RBP12.67□□□□□ -0.38
LMX1B-201ENST00000355497 ATP5J2P56134 94 aa12.67□□□□□ -0.38
LMX1B-201ENST00000355497 FMC1Q96HJ9 113 aa12.67□□□□□ -0.38
LMX1B-201ENST00000355497 WISP3O95389 354 aaPredicted RBP12.67□□□□□ -0.38
LMX1B-201ENST00000355497 TBR1Q16650 682 aa12.67□□□□□ -0.38
LMX1B-201ENST00000355497 STPG1Q5TH74 334 aa12.67□□□□□ -0.38
LMX1B-201ENST00000355497 IGHV3OR16-10A0A075B7F0 116 aa12.67□□□□□ -0.38
LMX1B-201ENST00000355497 NPIPB4C9JG80 1138 aa12.67□□□□□ -0.38
LMX1B-201ENST00000355497 UNQ9370/PRO34162Q6UXP9 181 aa12.67□□□□□ -0.38
LMX1B-201ENST00000355497 OR5P3Q8WZ94 311 aa12.67□□□□□ -0.38
LMX1B-201ENST00000355497 TMEM54Q969K7 222 aa12.67□□□□□ -0.38
LMX1B-201ENST00000355497 DERL1Q9BUN8 251 aa12.67□□□□□ -0.38
LMX1B-201ENST00000355497 SCN7AQ01118 1682 aa12.67□□□□□ -0.38
LMX1B-201ENST00000355497 AKAP11Q9UKA4 1901 aa12.67□□□□□ -0.38
LMX1B-201ENST00000355497 PEX7O00628 323 aa12.66□□□□□ -0.38
LMX1B-201ENST00000355497 PHLDA1Q8WV24 401 aaPredicted RBP12.66□□□□□ -0.38
LMX1B-201ENST00000355497 TMEM106BQ9NUM4 274 aa12.66□□□□□ -0.38
LMX1B-201ENST00000355497 PIN1P1O15428 100 aa12.66□□□□□ -0.38
LMX1B-201ENST00000355497 EGR1P18146 543 aa12.66□□□□□ -0.38
LMX1B-201ENST00000355497 DUX3Q96PT4 197 aa12.66□□□□□ -0.38
LMX1B-201ENST00000355497 SDHCQ99643 169 aaPredicted RBP12.66□□□□□ -0.38
LMX1B-201ENST00000355497 SPCS1Q9Y6A9 102 aa12.66□□□□□ -0.38
LMX1B-201ENST00000355497 IGHV3-66A0A0C4DH42 116 aa12.66□□□□□ -0.38
LMX1B-201ENST00000355497 FOXH1O75593 365 aa12.66□□□□□ -0.38
LMX1B-201ENST00000355497 RIPPLY2Q5TAB7 128 aa12.66□□□□□ -0.38
LMX1B-201ENST00000355497 FBLIM1Q8WUP2 373 aa12.66□□□□□ -0.38
LMX1B-201ENST00000355497 C14orf144Q96I85 54 aa12.66□□□□□ -0.38
LMX1B-201ENST00000355497 IGHV3-35A0A0C4DH35 117 aa12.66□□□□□ -0.38
LMX1B-201ENST00000355497 TYMSP04818 313 aa12.66□□□□□ -0.38
LMX1B-201ENST00000355497 RPL39P5Q59GN2 51 aa12.66□□□□□ -0.38
LMX1B-201ENST00000355497 NIT1Q86X76 327 aa12.66□□□□□ -0.38
LMX1B-201ENST00000355497 OR11H4Q8NGC9 324 aa12.66□□□□□ -0.38
LMX1B-201ENST00000355497 SCARF2Q96GP6 870 aaPredicted RBP12.66□□□□□ -0.38
LMX1B-201ENST00000355497 IFI27L2Q9H2X8 130 aa12.66□□□□□ -0.38
LMX1B-201ENST00000355497 PQLC2LA1A4F0 135 aa12.66□□□□□ -0.38
LMX1B-201ENST00000355497 ASPHD2Q6ICH7 369 aa12.66□□□□□ -0.38
LMX1B-201ENST00000355497 OR5AN1Q8NGI8 311 aa12.66□□□□□ -0.38
LMX1B-201ENST00000355497 SEMA5BQ9P283 1151 aa12.66□□□□□ -0.38
LMX1B-201ENST00000355497 TRAV8-2A0A0B4J237 113 aa12.65□□□□□ -0.38
LMX1B-201ENST00000355497 A0A1B0GW15 77 aa12.65□□□□□ -0.38
LMX1B-201ENST00000355497 SLC25A20O43772 301 aa12.65□□□□□ -0.38
LMX1B-201ENST00000355497 LRTM2Q8N967 370 aa12.65□□□□□ -0.38
LMX1B-201ENST00000355497 TUBA4BQ9H853 241 aa12.65□□□□□ -0.38
LMX1B-201ENST00000355497 SNAI2O43623 268 aa12.65□□□□□ -0.38
LMX1B-201ENST00000355497 IGHV4-39P01824 125 aa12.65□□□□□ -0.38
LMX1B-201ENST00000355497 TAF1P21675 1872 aa12.65□□□□□ -0.38
LMX1B-201ENST00000355497 DMRTA1Q5VZB9 504 aa12.65□□□□□ -0.38
LMX1B-201ENST00000355497 RNASEH2CQ8TDP1 164 aaKnown RBP12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms