RNA–Protein interactions for RNA: ENST00000355480.9

COL18A1-202, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL18A1, Length 5,924 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-202ENST00000355480 PRSS2P07478 247 aa15.32■□□□□ 0.04
COL18A1-202ENST00000355480 TMEM187Q14656 261 aa15.32■□□□□ 0.04
COL18A1-202ENST00000355480 MRPL32Q9BYC8 188 aaKnown RBP15.32■□□□□ 0.04
COL18A1-202ENST00000355480 IGHV3-49A0A0A0MS15 119 aa15.31■□□□□ 0.04
COL18A1-202ENST00000355480 RPLP1P05386 114 aaKnown RBP15.31■□□□□ 0.04
COL18A1-202ENST00000355480 LGALS3P17931 250 aaKnown RBP15.31■□□□□ 0.04
COL18A1-202ENST00000355480 AQP10Q96PS8 301 aa15.31■□□□□ 0.04
COL18A1-202ENST00000355480 IGHV3-66A0A0C4DH42 116 aa15.31■□□□□ 0.04
COL18A1-202ENST00000355480 FBLL1A6NHQ2 334 aaKnown RBP15.31■□□□□ 0.04
COL18A1-202ENST00000355480 FBXL15Q9H469 300 aa15.31■□□□□ 0.04
COL18A1-202ENST00000355480 LEPROTL1O95214 131 aa15.31■□□□□ 0.04
COL18A1-202ENST00000355480 NUTF2P61970 127 aaKnown RBP15.31■□□□□ 0.04
COL18A1-202ENST00000355480 C1QTNF12Q5T7M4 302 aa15.31■□□□□ 0.04
COL18A1-202ENST00000355480 MRPL18Q9H0U6 180 aaKnown RBP15.31■□□□□ 0.04
COL18A1-202ENST00000355480 TNS1Q9HBL0 1735 aaKnown RBP15.31■□□□□ 0.04
COL18A1-202ENST00000355480 A0A0G2JMM0 328 aa15.3■□□□□ 0.04
COL18A1-202ENST00000355480 A0A1W2PPB8 328 aa15.3■□□□□ 0.04
COL18A1-202ENST00000355480 A0A1W2PRS3 328 aa15.3■□□□□ 0.04
COL18A1-202ENST00000355480 KIR3DP1A8MWS1 328 aa15.3■□□□□ 0.04
COL18A1-202ENST00000355480 TNFSF10P50591 281 aa15.3■□□□□ 0.04
COL18A1-202ENST00000355480 FAM216BQ8N7L0 139 aa15.3■□□□□ 0.04
COL18A1-202ENST00000355480 SH3BGRL3Q9H299 93 aa15.3■□□□□ 0.04
COL18A1-202ENST00000355480 NPDC1Q9NQX5 325 aaPredicted RBP15.3■□□□□ 0.04
COL18A1-202ENST00000355480 S4R3C0 116 aa15.3■□□□□ 0.04
COL18A1-202ENST00000355480 LOC107984156A0A0G2JMH3 177 aa15.3■□□□□ 0.04
COL18A1-202ENST00000355480 IGKV1D-33P01593 117 aa15.3■□□□□ 0.04
COL18A1-202ENST00000355480 IGKV1-33P01594 117 aa15.3■□□□□ 0.04
COL18A1-202ENST00000355480 TRGC2P03986 189 aa15.3■□□□□ 0.04
COL18A1-202ENST00000355480 MEIG1Q5JSS6 88 aa15.3■□□□□ 0.04
COL18A1-202ENST00000355480 LINC00305Q7Z4B0 112 aa15.3■□□□□ 0.04
COL18A1-202ENST00000355480 ARL17AQ8IVW1 177 aa15.3■□□□□ 0.04
COL18A1-202ENST00000355480 LY75O60449 1722 aa15.3■□□□□ 0.04
COL18A1-202ENST00000355480 UCP3P55916 312 aa15.3■□□□□ 0.04
COL18A1-202ENST00000355480 PKIAP61925 76 aa15.3■□□□□ 0.04
COL18A1-202ENST00000355480 ZXDCQ2QGD7 858 aaPredicted RBP15.3■□□□□ 0.04
COL18A1-202ENST00000355480 ZNF660Q6AZW8 331 aaPredicted RBP15.3■□□□□ 0.04
COL18A1-202ENST00000355480 TCF24Q7RTU0 167 aa15.3■□□□□ 0.04
COL18A1-202ENST00000355480 UQCRFS1P47985 274 aa15.3■□□□□ 0.04
COL18A1-202ENST00000355480 C9JCJ5 164 aa15.3■□□□□ 0.04
COL18A1-202ENST00000355480 RBFOX2O43251 390 aaKnown RBP eCLIP15.3■□□□□ 0.043e-7■■■■□ 22.3
COL18A1-202ENST00000355480 PPP1R17O96001 155 aa15.3■□□□□ 0.04
COL18A1-202ENST00000355480 ZNF708P17019 499 aa15.3■□□□□ 0.04
COL18A1-202ENST00000355480 LHFPL5Q8TAF8 219 aa15.3■□□□□ 0.04
COL18A1-202ENST00000355480 RARRES2Q99969 163 aa15.3■□□□□ 0.04
COL18A1-202ENST00000355480 IGHV2OR16-5A0A0B4J2B6 119 aa15.29■□□□□ 0.04
COL18A1-202ENST00000355480 COL11A2P13942 1736 aaPredicted RBP15.29■□□□□ 0.04
COL18A1-202ENST00000355480 H0YL77 283 aa15.29■□□□□ 0.04
COL18A1-202ENST00000355480 ABLIM2Q6H8Q1 611 aa15.29■□□□□ 0.04
COL18A1-202ENST00000355480 C1orf162Q8NEQ5 155 aaPredicted RBP15.29■□□□□ 0.04
COL18A1-202ENST00000355480 KIR2DL4Q99706 377 aa15.29■□□□□ 0.04
COL18A1-202ENST00000355480 C7orf69Q9H7B7 122 aa15.29■□□□□ 0.04
COL18A1-202ENST00000355480 NPFFO15130 113 aa15.29■□□□□ 0.04
COL18A1-202ENST00000355480 TGFAP01135 160 aa15.29■□□□□ 0.04
COL18A1-202ENST00000355480 GEMIN7Q9H840 131 aaKnown RBP15.29■□□□□ 0.04
COL18A1-202ENST00000355480 CEACAM4O75871 244 aa15.29■□□□□ 0.04
COL18A1-202ENST00000355480 CIRBPQ14011 172 aaKnown RBP15.29■□□□□ 0.04
COL18A1-202ENST00000355480 STRCP1A6NGW2 1772 aa15.29■□□□□ 0.04
COL18A1-202ENST00000355480 C12orf77C9JDV5 145 aa15.28■□□□□ 0.04
COL18A1-202ENST00000355480 RRHO14718 337 aa15.28■□□□□ 0.04
COL18A1-202ENST00000355480 SMUG1Q53HV7 270 aa15.28■□□□□ 0.04
COL18A1-202ENST00000355480 DNLZQ5SXM8 178 aa15.28■□□□□ 0.04
COL18A1-202ENST00000355480 FBXL7Q9UJT9 491 aa15.28■□□□□ 0.04
COL18A1-202ENST00000355480 ANKRD31Q8N7Z5 1873 aa15.28■□□□□ 0.04
COL18A1-202ENST00000355480 ADAMTS7Q9UKP4 1686 aa15.28■□□□□ 0.04
COL18A1-202ENST00000355480 LTBRP36941 435 aa15.28■□□□□ 0.04
COL18A1-202ENST00000355480 CYP2G1PQ6ZSU1 146 aa15.28■□□□□ 0.04
COL18A1-202ENST00000355480 CLDND2Q8NHS1 167 aa15.28■□□□□ 0.04
COL18A1-202ENST00000355480 ITLN2Q8WWU7 325 aaPredicted RBP15.28■□□□□ 0.04
COL18A1-202ENST00000355480 GPR61Q9BZJ8 451 aa15.28■□□□□ 0.04
COL18A1-202ENST00000355480 YAE1D1Q9NRH1 226 aa15.28■□□□□ 0.04
COL18A1-202ENST00000355480 TDRD6O60522 2096 aaKnown RBP15.28■□□□□ 0.04
COL18A1-202ENST00000355480 NMBP08949 121 aa15.28■□□□□ 0.04
COL18A1-202ENST00000355480 OR4X2Q8NGF9 303 aa15.28■□□□□ 0.04
COL18A1-202ENST00000355480 FBLIM1Q8WUP2 373 aa15.28■□□□□ 0.04
COL18A1-202ENST00000355480 ZNF318Q5VUA4 2279 aa15.28■□□□□ 0.04
COL18A1-202ENST00000355480 TM4SF5O14894 197 aa15.27■□□□□ 0.04
COL18A1-202ENST00000355480 EFEMP2O95967 443 aa15.27■□□□□ 0.04
COL18A1-202ENST00000355480 TMEM105Q8N8V8 129 aa15.27■□□□□ 0.04
COL18A1-202ENST00000355480 OSR1Q8TAX0 266 aaPredicted RBP15.27■□□□□ 0.04
COL18A1-202ENST00000355480 GATAD1Q8WUU5 269 aa15.27■□□□□ 0.04
COL18A1-202ENST00000355480 A0A0G2JLM5 398 aa15.27■□□□□ 0.04
COL18A1-202ENST00000355480 AGAP20933 346 aa15.27■□□□□ 0.04
COL18A1-202ENST00000355480 ZFC3H1O60293 1989 aaKnown RBP15.27■□□□□ 0.04
COL18A1-202ENST00000355480 IGHV1-2P23083 117 aa15.27■□□□□ 0.04
COL18A1-202ENST00000355480 ATP5IP56385 69 aaPredicted RBP15.27■□□□□ 0.04
COL18A1-202ENST00000355480 RND3P61587 244 aa15.27■□□□□ 0.04
COL18A1-202ENST00000355480 HIST1H4GQ99525 98 aa15.27■□□□□ 0.04
COL18A1-202ENST00000355480 PPP1R27Q86WC6 154 aa15.27■□□□□ 0.03
COL18A1-202ENST00000355480 GCHFRP30047 84 aa15.27■□□□□ 0.03
COL18A1-202ENST00000355480 CD69Q07108 199 aa15.27■□□□□ 0.03
COL18A1-202ENST00000355480 ICAM4Q14773 271 aa15.27■□□□□ 0.03
COL18A1-202ENST00000355480 COL5A3P25940 1745 aaPredicted RBP15.26■□□□□ 0.03
COL18A1-202ENST00000355480 CDKN1AP38936 164 aa15.26■□□□□ 0.03
COL18A1-202ENST00000355480 SPATA45Q537H7 98 aa15.26■□□□□ 0.03
COL18A1-202ENST00000355480 FOXA2Q9Y261 457 aaPredicted RBP15.26■□□□□ 0.03
COL18A1-202ENST00000355480 AHCTF1Q8WYP5 2266 aa15.26■□□□□ 0.03
COL18A1-202ENST00000355480 ARFGEF1Q9Y6D6 1849 aa15.26■□□□□ 0.03
COL18A1-202ENST00000355480 SAPCD1Q5SSQ6 148 aa15.26■□□□□ 0.03
COL18A1-202ENST00000355480 PSMB11A5LHX3 300 aa15.26■□□□□ 0.03
COL18A1-202ENST00000355480 SRIP30626 198 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms