RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 OR2T6Q8NHC8 308 aa4.49□□□□□ -1.69
CD47-201ENST00000355354 QTRT1Q9BXR0 403 aaKnown RBP4.49□□□□□ -1.69
CD47-201ENST00000355354 Q9N2K0 584 aa4.49□□□□□ -1.69
CD47-201ENST00000355354 PAGE4O60829 102 aa4.49□□□□□ -1.69
CD47-201ENST00000355354 TNFSF13O75888 250 aa4.49□□□□□ -1.69
CD47-201ENST00000355354 ZNF16P17020 682 aaPredicted RBP4.49□□□□□ -1.69
CD47-201ENST00000355354 CRIP1P50238 77 aa4.49□□□□□ -1.69
CD47-201ENST00000355354 EDDM3BP56851 147 aa4.49□□□□□ -1.69
CD47-201ENST00000355354 WT1-ASQ06250 92 aa4.49□□□□□ -1.69
CD47-201ENST00000355354 ZNF345Q14585 488 aa4.49□□□□□ -1.69
CD47-201ENST00000355354 FAM57AQ8TBR7 257 aa4.49□□□□□ -1.69
CD47-201ENST00000355354 IL36GQ9NZH8 169 aa4.49□□□□□ -1.69
CD47-201ENST00000355354 ZNF737O75373 536 aa4.48□□□□□ -1.69
CD47-201ENST00000355354 AREGP15514 252 aa4.48□□□□□ -1.69
CD47-201ENST00000355354 GATA1P15976 413 aaPredicted RBP4.48□□□□□ -1.69
CD47-201ENST00000355354 CD53P19397 219 aa4.48□□□□□ -1.69
CD47-201ENST00000355354 HOXA1P49639 335 aaPredicted RBP4.48□□□□□ -1.69
CD47-201ENST00000355354 PRDX4Q13162 271 aa4.48□□□□□ -1.69
CD47-201ENST00000355354 TMEM244Q5VVB8 128 aa4.48□□□□□ -1.69
CD47-201ENST00000355354 Q6ZSR3 168 aa4.48□□□□□ -1.69
CD47-201ENST00000355354 LINC01551Q86U37 167 aa4.48□□□□□ -1.69
CD47-201ENST00000355354 CMTM1Q8IZ96 169 aa4.48□□□□□ -1.69
CD47-201ENST00000355354 PGAM5Q96HS1 289 aa4.48□□□□□ -1.69
CD47-201ENST00000355354 C2orf50Q96LR7 162 aa4.48□□□□□ -1.69
CD47-201ENST00000355354 LINC00527Q9UJ94 153 aa4.48□□□□□ -1.69
CD47-201ENST00000355354 UBE2L5PA0A1B0GUS4 154 aa4.48□□□□□ -1.69
CD47-201ENST00000355354 KRBOX1C9JBD0 128 aa4.48□□□□□ -1.69
CD47-201ENST00000355354 NPIPA5E9PKD4 350 aa4.48□□□□□ -1.69
CD47-201ENST00000355354 ACTL6BO94805 426 aa4.48□□□□□ -1.69
CD47-201ENST00000355354 CD200P41217 278 aa4.48□□□□□ -1.69
CD47-201ENST00000355354 RELBQ01201 579 aa4.48□□□□□ -1.69
CD47-201ENST00000355354 NAAAQ02083 359 aa4.48□□□□□ -1.69
CD47-201ENST00000355354 SLC35E4Q6ICL7 350 aa4.48□□□□□ -1.69
CD47-201ENST00000355354 LUZP2Q86TE4 346 aa4.48□□□□□ -1.69
CD47-201ENST00000355354 CISD2Q8N5K1 135 aaKnown RBP4.48□□□□□ -1.69
CD47-201ENST00000355354 OR5D14Q8NGL3 314 aa4.48□□□□□ -1.69
CD47-201ENST00000355354 DIABLOQ9NR28 239 aa4.48□□□□□ -1.69
CD47-201ENST00000355354 CLEC5AQ9NY25 188 aa4.48□□□□□ -1.69
CD47-201ENST00000355354 NPIPA1Q9UND3 350 aa4.48□□□□□ -1.69
CD47-201ENST00000355354 POLR1DQ9Y2S0 133 aa4.48□□□□□ -1.69
CD47-201ENST00000355354 IGKV1D-37A0A075B6S9 117 aa4.48□□□□□ -1.69
CD47-201ENST00000355354 C15orf65H3BRN8 121 aa4.48□□□□□ -1.69
CD47-201ENST00000355354 M0R036 132 aa4.48□□□□□ -1.69
CD47-201ENST00000355354 IGHG4P01861 327 aa4.48□□□□□ -1.69
CD47-201ENST00000355354 IGHMP01871 453 aa4.48□□□□□ -1.69
CD47-201ENST00000355354 HIST1H1BP16401 226 aaKnown RBP4.48□□□□□ -1.69
CD47-201ENST00000355354 ZNF823P16415 610 aa4.48□□□□□ -1.69
CD47-201ENST00000355354 KLF3P57682 345 aaPredicted RBP4.48□□□□□ -1.69
CD47-201ENST00000355354 PRSS57Q6UWY2 283 aa4.48□□□□□ -1.69
CD47-201ENST00000355354 ASCL4Q6XD76 172 aa4.48□□□□□ -1.69
CD47-201ENST00000355354 ZNF610Q8N9Z0 462 aa4.48□□□□□ -1.69
CD47-201ENST00000355354 ZNF439Q8NDP4 499 aa4.48□□□□□ -1.69
CD47-201ENST00000355354 OR2G3Q8NGZ4 309 aa4.48□□□□□ -1.69
CD47-201ENST00000355354 XKRY2A2RUG3 117 aa4.48□□□□□ -1.69
CD47-201ENST00000355354 MBD3L4A6NDZ8 208 aaPredicted RBP4.48□□□□□ -1.69
CD47-201ENST00000355354 MBD3L3A6NE82 208 aaPredicted RBP4.48□□□□□ -1.69
CD47-201ENST00000355354 MBD3L5A6NJ08 208 aaPredicted RBP4.48□□□□□ -1.69
CD47-201ENST00000355354 CGB3P0DN86 165 aa4.48□□□□□ -1.69
CD47-201ENST00000355354 CGB7P0DN87 165 aa4.48□□□□□ -1.69
CD47-201ENST00000355354 ZNF14P17017 642 aaPredicted RBP4.48□□□□□ -1.69
CD47-201ENST00000355354 F2RP25116 425 aa4.48□□□□□ -1.69
CD47-201ENST00000355354 UCP1P25874 307 aa4.48□□□□□ -1.69
CD47-201ENST00000355354 P2RY1P47900 373 aa4.48□□□□□ -1.69
CD47-201ENST00000355354 CR1LQ2VPA4 569 aa4.48□□□□□ -1.69
CD47-201ENST00000355354 MZT2AQ6P582 158 aa4.48□□□□□ -1.69
CD47-201ENST00000355354 MRGPRGQ86SM5 289 aa4.48□□□□□ -1.69
CD47-201ENST00000355354 FAM90A1Q86YD7 464 aa4.48□□□□□ -1.69
CD47-201ENST00000355354 SCCPDHQ8NBX0 429 aa4.48□□□□□ -1.69
CD47-201ENST00000355354 MBD3L2Q8NHZ7 208 aaPredicted RBP4.48□□□□□ -1.69
CD47-201ENST00000355354 FAM216AQ8WUB2 273 aa4.48□□□□□ -1.69
CD47-201ENST00000355354 FER1L6-AS2Q96M78 137 aa4.48□□□□□ -1.69
CD47-201ENST00000355354 NEU1Q99519 415 aa4.48□□□□□ -1.69
CD47-201ENST00000355354 SEC11CQ9BY50 192 aa4.48□□□□□ -1.69
CD47-201ENST00000355354 NAA60Q9H7X0 242 aa4.48□□□□□ -1.69
CD47-201ENST00000355354 MYOZ1Q9NP98 299 aaPredicted RBP4.48□□□□□ -1.69
CD47-201ENST00000355354 PAM16Q9Y3D7 125 aa4.48□□□□□ -1.69
CD47-201ENST00000355354 DNAH2Q9P225 4427 aa4.48□□□□□ -1.69
CD47-201ENST00000355354 VPS13DQ5THJ4 4388 aa4.47□□□□□ -1.69
CD47-201ENST00000355354 A0A0G2JNJ9 132 aa4.47□□□□□ -1.69
CD47-201ENST00000355354 C3orf85A0A1B0GTC6 90 aa4.47□□□□□ -1.69
CD47-201ENST00000355354 IFNGP01579 166 aa4.47□□□□□ -1.69
CD47-201ENST00000355354 CD1AP06126 327 aa4.47□□□□□ -1.69
CD47-201ENST00000355354 LINC00869P0C866 280 aa4.47□□□□□ -1.69
CD47-201ENST00000355354 UBBP0CG47 229 aa4.47□□□□□ -1.69
CD47-201ENST00000355354 MRPS11P82912 194 aaKnown RBP4.47□□□□□ -1.69
CD47-201ENST00000355354 OR8G1Q15617 311 aa4.47□□□□□ -1.69
CD47-201ENST00000355354 ZNF672Q499Z4 452 aaPredicted RBP4.47□□□□□ -1.69
CD47-201ENST00000355354 IL22RA2Q969J5 263 aa4.47□□□□□ -1.69
CD47-201ENST00000355354 PINX1Q96BK5 328 aaKnown RBP4.47□□□□□ -1.69
CD47-201ENST00000355354 HIST1H2AAQ96QV6 131 aa4.47□□□□□ -1.69
CD47-201ENST00000355354 Q9UFV3 132 aa4.47□□□□□ -1.69
CD47-201ENST00000355354 GAB2Q9UQC2 676 aa4.47□□□□□ -1.69
CD47-201ENST00000355354 MMACHCQ9Y4U1 282 aa4.47□□□□□ -1.69
CD47-201ENST00000355354 IGLV3-32A0A0A0MS00 114 aa4.47□□□□□ -1.69
CD47-201ENST00000355354 NSG1A0A0A6YYJ2 146 aa4.47□□□□□ -1.69
CD47-201ENST00000355354 PSMB11A5LHX3 300 aa4.47□□□□□ -1.69
CD47-201ENST00000355354 CECR9P0C854 216 aa4.47□□□□□ -1.69
CD47-201ENST00000355354 NDPQ00604 133 aa4.47□□□□□ -1.69
CD47-201ENST00000355354 TPTE2P1Q5T6R2 138 aa4.47□□□□□ -1.69
CD47-201ENST00000355354 OR10J5Q8NHC4 309 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms