RNA–Protein interactions for RNA: ENST00000355072.9

HTT-201, Transcript of huntingtin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTT, Length 13,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-201ENST00000355072 LHX2P50458 406 aa6.94□□□□□ -1.3
HTT-201ENST00000355072 LYZP61626 148 aa6.94□□□□□ -1.3
HTT-201ENST00000355072 BCL6BQ8N143 479 aaPredicted RBP6.94□□□□□ -1.3
HTT-201ENST00000355072 H3BMM0 161 aa6.94□□□□□ -1.3
HTT-201ENST00000355072 CD300CQ08708 224 aa6.94□□□□□ -1.3
HTT-201ENST00000355072 DCAF10Q5QP82 559 aa6.94□□□□□ -1.3
HTT-201ENST00000355072 TRAV8-2A0A0B4J237 113 aa6.94□□□□□ -1.3
HTT-201ENST00000355072 CTLA4P16410 223 aa6.94□□□□□ -1.3
HTT-201ENST00000355072 CFPP27918 469 aa6.94□□□□□ -1.3
HTT-201ENST00000355072 LAMTOR1Q6IAA8 161 aa6.94□□□□□ -1.3
HTT-201ENST00000355072 TNFAIP6P98066 277 aaPredicted RBP6.94□□□□□ -1.3
HTT-201ENST00000355072 TMEM86BQ8N661 226 aa6.94□□□□□ -1.3
HTT-201ENST00000355072 CITED2Q99967 270 aaPredicted RBP6.94□□□□□ -1.3
HTT-201ENST00000355072 KLF12Q9Y4X4 402 aa6.94□□□□□ -1.3
HTT-201ENST00000355072 A0A1W2PRE2 83 aa6.93□□□□□ -1.3
HTT-201ENST00000355072 SRSF6Q13247 344 aaKnown RBP6.93□□□□□ -1.3
HTT-201ENST00000355072 SP6Q3SY56 376 aa6.93□□□□□ -1.3
HTT-201ENST00000355072 MSRB3Q8IXL7 192 aa6.93□□□□□ -1.3
HTT-201ENST00000355072 TRAV17A0A0B4J275 112 aa6.93□□□□□ -1.3
HTT-201ENST00000355072 ANOS1P23352 680 aa6.93□□□□□ -1.3
HTT-201ENST00000355072 FAM78AQ5JUQ0 283 aa6.93□□□□□ -1.3
HTT-201ENST00000355072 OTPQ5XKR4 325 aa6.93□□□□□ -1.3
HTT-201ENST00000355072 LIMS2Q7Z4I7 341 aa6.93□□□□□ -1.3
HTT-201ENST00000355072 MED29Q9NX70 200 aa6.93□□□□□ -1.3
HTT-201ENST00000355072 ACTL10Q5JWF8 245 aa6.93□□□□□ -1.3
HTT-201ENST00000355072 A0A1W2PPC1 479 aa6.93□□□□□ -1.3
HTT-201ENST00000355072 NKX2-8O15522 239 aa6.93□□□□□ -1.3
HTT-201ENST00000355072 EFNB2P52799 333 aa6.93□□□□□ -1.3
HTT-201ENST00000355072 NKG7Q16617 165 aa6.93□□□□□ -1.3
HTT-201ENST00000355072 LINC01465Q8N7H1 131 aa6.93□□□□□ -1.3
HTT-201ENST00000355072 DLEU1O43261 78 aa6.93□□□□□ -1.3
HTT-201ENST00000355072 MRPS11P82912 194 aaKnown RBP6.93□□□□□ -1.3
HTT-201ENST00000355072 GPR146Q96CH1 333 aa6.93□□□□□ -1.3
HTT-201ENST00000355072 SPACA5Q96QH8 159 aa6.93□□□□□ -1.3
HTT-201ENST00000355072 FAM181BA6NEQ2 426 aa6.93□□□□□ -1.3
HTT-201ENST00000355072 CEACAM1P13688 526 aa6.93□□□□□ -1.3
HTT-201ENST00000355072 SLC23A3Q6PIS1 610 aa6.93□□□□□ -1.3
HTT-201ENST00000355072 DNASE2BQ8WZ79 361 aa6.93□□□□□ -1.3
HTT-201ENST00000355072 ZNF703Q9H7S9 590 aaPredicted RBP6.93□□□□□ -1.3
HTT-201ENST00000355072 JPT1Q9UK76 154 aa6.93□□□□□ -1.3
HTT-201ENST00000355072 KIAA1671Q9BY89 1806 aa6.93□□□□□ -1.3
HTT-201ENST00000355072 DPM2O94777 84 aa6.93□□□□□ -1.3
HTT-201ENST00000355072 CDC42EP2O14613 210 aa6.93□□□□□ -1.3
HTT-201ENST00000355072 IFI27P40305 119 aaPredicted RBP6.93□□□□□ -1.3
HTT-201ENST00000355072 MDP1Q86V88 176 aa6.93□□□□□ -1.3
HTT-201ENST00000355072 DXOO77932 396 aaKnown RBP6.93□□□□□ -1.3
HTT-201ENST00000355072 LRRC29Q8WV35 223 aa6.93□□□□□ -1.3
HTT-201ENST00000355072 hCG_38984A0A1B0GV85 526 aa6.93□□□□□ -1.3
HTT-201ENST00000355072 LYZL2Q7Z4W2 148 aa6.93□□□□□ -1.3
HTT-201ENST00000355072 ONECUT1Q9UBC0 465 aa6.93□□□□□ -1.3
HTT-201ENST00000355072 ATXN7O15265 892 aaPredicted RBP6.92□□□□□ -1.3
HTT-201ENST00000355072 EBLN2Q6P2I7 272 aa6.92□□□□□ -1.3
HTT-201ENST00000355072 FAM222BQ8WU58 562 aa6.92□□□□□ -1.3
HTT-201ENST00000355072 HIGD1CA8MV81 97 aa6.92□□□□□ -1.3
HTT-201ENST00000355072 HCRTO43612 131 aa6.92□□□□□ -1.3
HTT-201ENST00000355072 GDF9O60383 454 aa6.92□□□□□ -1.3
HTT-201ENST00000355072 TSPAN7P41732 249 aa6.92□□□□□ -1.3
HTT-201ENST00000355072 BATF2Q8N1L9 274 aa6.92□□□□□ -1.3
HTT-201ENST00000355072 MAGEA5P43359 124 aa6.92□□□□□ -1.3
HTT-201ENST00000355072 PHLDA1Q8WV24 401 aaPredicted RBP6.92□□□□□ -1.3
HTT-201ENST00000355072 HIST1H2BLQ99880 126 aa6.92□□□□□ -1.3
HTT-201ENST00000355072 LYPD1Q8N2G4 141 aa6.92□□□□□ -1.3
HTT-201ENST00000355072 AMER3Q8N944 861 aa6.92□□□□□ -1.3
HTT-201ENST00000355072 RCC1LQ96I51 464 aaKnown RBP6.92□□□□□ -1.3
HTT-201ENST00000355072 IL36RNQ9UBH0 155 aa6.92□□□□□ -1.3
HTT-201ENST00000355072 M0R1B8 84 aa6.92□□□□□ -1.3
HTT-201ENST00000355072 NTN1O95631 604 aa6.92□□□□□ -1.3
HTT-201ENST00000355072 SRFP11831 508 aa6.92□□□□□ -1.3
HTT-201ENST00000355072 OR52E5Q8NH55 327 aa6.92□□□□□ -1.3
HTT-201ENST00000355072 C12orf49Q9H741 205 aa6.92□□□□□ -1.3
HTT-201ENST00000355072 TRBV5-7A0A0A0MS05 114 aa6.92□□□□□ -1.3
HTT-201ENST00000355072 A0A0G2JLM5 398 aa6.92□□□□□ -1.3
HTT-201ENST00000355072 CRPP02741 224 aa6.92□□□□□ -1.3
HTT-201ENST00000355072 CSN3P07498 182 aa6.92□□□□□ -1.3
HTT-201ENST00000355072 GVQW1Q8N7I0 195 aa6.92□□□□□ -1.3
HTT-201ENST00000355072 OR9G1Q8NH87 305 aa6.92□□□□□ -1.3
HTT-201ENST00000355072 Q96M66 194 aa6.92□□□□□ -1.3
HTT-201ENST00000355072 DMRTA2Q96SC8 542 aa6.92□□□□□ -1.3
HTT-201ENST00000355072 SLC50A1Q9BRV3 221 aa6.92□□□□□ -1.3
HTT-201ENST00000355072 KLK13Q9UKR3 277 aa6.92□□□□□ -1.3
HTT-201ENST00000355072 GGTLC3B5MD39 225 aa6.92□□□□□ -1.3
HTT-201ENST00000355072 TM2D1Q9BX74 207 aa6.92□□□□□ -1.3
HTT-201ENST00000355072 H0YL77 283 aa6.92□□□□□ -1.3
HTT-201ENST00000355072 RPP21Q9H633 154 aaKnown RBP6.92□□□□□ -1.3
HTT-201ENST00000355072 PSG2P11465 335 aa6.92□□□□□ -1.3
HTT-201ENST00000355072 UCP1P25874 307 aa6.92□□□□□ -1.3
HTT-201ENST00000355072 CNTFRP26992 372 aa6.92□□□□□ -1.3
HTT-201ENST00000355072 ZNF774Q6NX45 483 aa6.92□□□□□ -1.3
HTT-201ENST00000355072 OR5P3Q8WZ94 311 aa6.92□□□□□ -1.3
HTT-201ENST00000355072 THOC3Q96J01 351 aaKnown RBP6.92□□□□□ -1.3
HTT-201ENST00000355072 INSIG2Q9Y5U4 225 aa6.92□□□□□ -1.3
HTT-201ENST00000355072 LDLRAD1Q5T700 205 aa6.91□□□□□ -1.3
HTT-201ENST00000355072 FBXW9Q5XUX1 488 aa6.91□□□□□ -1.3
HTT-201ENST00000355072 GLCCI1Q86VQ1 547 aa6.91□□□□□ -1.3
HTT-201ENST00000355072 EMC6Q9BV81 110 aa6.91□□□□□ -1.3
HTT-201ENST00000355072 TMEM126AQ9H061 195 aa6.91□□□□□ -1.3
HTT-201ENST00000355072 P2RY4P51582 365 aa6.91□□□□□ -1.3
HTT-201ENST00000355072 SSMEM1Q8WWF3 244 aa6.91□□□□□ -1.3
HTT-201ENST00000355072 ZXDCQ2QGD7 858 aaPredicted RBP6.91□□□□□ -1.3
HTT-201ENST00000355072 C20orf144Q9BQM9 153 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms