RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 PHOX2AO14813 284 aa16.18■□□□□ 0.18
COL13A1-201ENST00000354547 SRD5A3Q9H8P0 318 aa16.18■□□□□ 0.18
COL13A1-201ENST00000354547 GFOD1Q9NXC2 390 aa16.18■□□□□ 0.18
COL13A1-201ENST00000354547 FUT9Q9Y231 359 aa16.18■□□□□ 0.18
COL13A1-201ENST00000354547 SLC25A15Q9Y619 301 aa16.18■□□□□ 0.18
COL13A1-201ENST00000354547 ZFHX2Q9C0A1 2572 aaPredicted RBP16.18■□□□□ 0.18
COL13A1-201ENST00000354547 MGST3O14880 152 aa16.18■□□□□ 0.18
COL13A1-201ENST00000354547 GNG10P50151 68 aa16.18■□□□□ 0.18
COL13A1-201ENST00000354547 TREML4Q6UXN2 200 aa16.18■□□□□ 0.18
COL13A1-201ENST00000354547 TCTEX1D1Q8N7M0 179 aa16.18■□□□□ 0.18
COL13A1-201ENST00000354547 ASCL3Q9NQ33 180 aa16.18■□□□□ 0.18
COL13A1-201ENST00000354547 ATMQ13315 3056 aa16.17■□□□□ 0.18
COL13A1-201ENST00000354547 PKDREJQ9NTG1 2253 aa16.17■□□□□ 0.18
COL13A1-201ENST00000354547 GNB1P62873 340 aa16.17■□□□□ 0.18
COL13A1-201ENST00000354547 VWC2Q2TAL6 325 aa16.17■□□□□ 0.18
COL13A1-201ENST00000354547 XKRY2A2RUG3 117 aa16.17■□□□□ 0.18
COL13A1-201ENST00000354547 ZNF891A8MT65 544 aaPredicted RBP16.17■□□□□ 0.18
COL13A1-201ENST00000354547 ARL14EPLP0DKL9 152 aa16.17■□□□□ 0.18
COL13A1-201ENST00000354547 LOXL3P58215 753 aa16.17■□□□□ 0.18
COL13A1-201ENST00000354547 SPCS3P61009 180 aa16.17■□□□□ 0.18
COL13A1-201ENST00000354547 IFI27L2Q9H2X8 130 aa16.17■□□□□ 0.18
COL13A1-201ENST00000354547 CALYQ9NYX4 217 aa16.17■□□□□ 0.18
COL13A1-201ENST00000354547 FAM78BQ5VT40 261 aa16.16■□□□□ 0.18
COL13A1-201ENST00000354547 PPP1R35Q8TAP8 253 aa16.16■□□□□ 0.18
COL13A1-201ENST00000354547 AKAP13Q12802 2813 aa16.16■□□□□ 0.18
COL13A1-201ENST00000354547 HRASP01112 189 aa16.16■□□□□ 0.18
COL13A1-201ENST00000354547 CGAP01215 116 aa16.16■□□□□ 0.18
COL13A1-201ENST00000354547 ZNF114Q8NC26 417 aa16.16■□□□□ 0.18
COL13A1-201ENST00000354547 WFIKKN1Q96NZ8 548 aa16.16■□□□□ 0.18
COL13A1-201ENST00000354547 JPT1Q9UK76 154 aa16.16■□□□□ 0.18
COL13A1-201ENST00000354547 PITPNC1Q9UKF7 332 aa16.16■□□□□ 0.18
COL13A1-201ENST00000354547 PXMP4Q9Y6I8 212 aa16.16■□□□□ 0.18
COL13A1-201ENST00000354547 C1QTNF9P0C862 333 aa16.16■□□□□ 0.18
COL13A1-201ENST00000354547 PMS2P11Q13670 270 aa16.16■□□□□ 0.18
COL13A1-201ENST00000354547 LYG1Q8N1E2 194 aa16.16■□□□□ 0.18
COL13A1-201ENST00000354547 OR2T10Q8NGZ9 312 aa16.16■□□□□ 0.18
COL13A1-201ENST00000354547 MGST2Q99735 147 aa16.16■□□□□ 0.18
COL13A1-201ENST00000354547 PARD6AQ9NPB6 346 aa16.16■□□□□ 0.18
COL13A1-201ENST00000354547 ZNRD1Q9P1U0 126 aa16.16■□□□□ 0.18
COL13A1-201ENST00000354547 KLF3P57682 345 aaPredicted RBP16.15■□□□□ 0.18
COL13A1-201ENST00000354547 RELBQ01201 579 aa16.15■□□□□ 0.18
COL13A1-201ENST00000354547 TRAT1Q6PIZ9 186 aa16.15■□□□□ 0.18
COL13A1-201ENST00000354547 ZNF474Q6S9Z5 364 aaPredicted RBP16.15■□□□□ 0.18
COL13A1-201ENST00000354547 TMEM170AQ8WVE7 144 aa16.15■□□□□ 0.18
COL13A1-201ENST00000354547 PRDM13Q9H4Q3 707 aa16.15■□□□□ 0.18
COL13A1-201ENST00000354547 TCF19Q9Y242 345 aa16.15■□□□□ 0.18
COL13A1-201ENST00000354547 AHRRA9YTQ3 701 aa16.15■□□□□ 0.18
COL13A1-201ENST00000354547 GFRA3O60609 400 aa16.15■□□□□ 0.18
COL13A1-201ENST00000354547 FAM90A1Q86YD7 464 aa16.15■□□□□ 0.18
COL13A1-201ENST00000354547 TGIF2LYQ8IUE0 185 aa16.15■□□□□ 0.18
COL13A1-201ENST00000354547 FAM122AQ96E09 287 aa16.15■□□□□ 0.18
COL13A1-201ENST00000354547 YPEL1O60688 119 aa16.14■□□□□ 0.17
COL13A1-201ENST00000354547 MZT1Q08AG7 82 aa16.14■□□□□ 0.17
COL13A1-201ENST00000354547 SNRNP40Q96DI7 357 aaKnown RBP16.14■□□□□ 0.17
COL13A1-201ENST00000354547 YPEL2Q96QA6 119 aa16.14■□□□□ 0.17
COL13A1-201ENST00000354547 TGOLN2O43493 480 aa16.14■□□□□ 0.17
COL13A1-201ENST00000354547 CT45A1Q5HYN5 189 aa16.14■□□□□ 0.17
COL13A1-201ENST00000354547 CT45A3Q8NHU0 189 aa16.14■□□□□ 0.17
COL13A1-201ENST00000354547 HIST1H1BP16401 226 aaKnown RBP16.13■□□□□ 0.17
COL13A1-201ENST00000354547 VDAC2P45880 294 aaPredicted RBP16.13■□□□□ 0.17
COL13A1-201ENST00000354547 SPATA31B1PQ5VZV4 182 aa16.13■□□□□ 0.17
COL13A1-201ENST00000354547 SAA2-SAA4A0A096LPE2 208 aa16.13■□□□□ 0.17
COL13A1-201ENST00000354547 SAA2P0DJI9 122 aaPredicted RBP16.13■□□□□ 0.17
COL13A1-201ENST00000354547 RPP30P78346 268 aaKnown RBP16.13■□□□□ 0.17
COL13A1-201ENST00000354547 LINC01551Q86U37 167 aa16.13■□□□□ 0.17
COL13A1-201ENST00000354547 OR1P1Q8NH06 330 aa16.13■□□□□ 0.17
COL13A1-201ENST00000354547 GGTLC1Q9BX51 225 aa16.13■□□□□ 0.17
COL13A1-201ENST00000354547 DCAF16Q9NXF7 216 aa16.13■□□□□ 0.17
COL13A1-201ENST00000354547 ACACAQ13085 2346 aa16.13■□□□□ 0.17
COL13A1-201ENST00000354547 ACTL6BO94805 426 aa16.13■□□□□ 0.17
COL13A1-201ENST00000354547 IGFL2Q6UWQ7 119 aa16.13■□□□□ 0.17
COL13A1-201ENST00000354547 C22orf34Q6ZV56 151 aa16.13■□□□□ 0.17
COL13A1-201ENST00000354547 TMEM183AQ8IXX5 376 aa16.13■□□□□ 0.17
COL13A1-201ENST00000354547 CCL13Q99616 98 aa16.13■□□□□ 0.17
COL13A1-201ENST00000354547 KALRNO60229 2985 aa16.12■□□□□ 0.17
COL13A1-201ENST00000354547 ZNF729A6NN14 1252 aaPredicted RBP16.12■□□□□ 0.17
COL13A1-201ENST00000354547 DEFA6Q01524 100 aa16.12■□□□□ 0.17
COL13A1-201ENST00000354547 SCO2A0A1W2PP80 73 aa16.12■□□□□ 0.17
COL13A1-201ENST00000354547 ZNF320A2RRD8 509 aa16.12■□□□□ 0.17
COL13A1-201ENST00000354547 AMBPP02760 352 aa16.12■□□□□ 0.17
COL13A1-201ENST00000354547 ZADH2Q8N4Q0 377 aa16.12■□□□□ 0.17
COL13A1-201ENST00000354547 ANAPC16Q96DE5 110 aa16.12■□□□□ 0.17
COL13A1-201ENST00000354547 SEPSECSQ9HD40 501 aaKnown RBP16.12■□□□□ 0.17
COL13A1-201ENST00000354547 THBS3P49746 956 aa16.11■□□□□ 0.17
COL13A1-201ENST00000354547 C17orf58Q2M2W7 97 aa16.11■□□□□ 0.17
COL13A1-201ENST00000354547 OR4A47Q6IF82 309 aa16.11■□□□□ 0.17
COL13A1-201ENST00000354547 PYGO2Q9BRQ0 406 aa16.11■□□□□ 0.17
COL13A1-201ENST00000354547 FOXH1O75593 365 aa16.11■□□□□ 0.17
COL13A1-201ENST00000354547 MMP23AO75900 390 aa16.11■□□□□ 0.17
COL13A1-201ENST00000354547 FAM27E3Q08E93 113 aa16.11■□□□□ 0.17
COL13A1-201ENST00000354547 UNQ6494/PRO21346Q6UXR6 183 aa16.11■□□□□ 0.17
COL13A1-201ENST00000354547 FAM216BQ8N7L0 139 aa16.11■□□□□ 0.17
COL13A1-201ENST00000354547 TUBG2Q9NRH3 451 aa16.11■□□□□ 0.17
COL13A1-201ENST00000354547 ZNF705GA8MUZ8 300 aaPredicted RBP16.11■□□□□ 0.17
COL13A1-201ENST00000354547 MRPS11P82912 194 aaKnown RBP16.11■□□□□ 0.17
COL13A1-201ENST00000354547 ARSJQ5FYB0 599 aaPredicted RBP16.11■□□□□ 0.17
COL13A1-201ENST00000354547 PIP4P1Q86T03 277 aa16.11■□□□□ 0.17
COL13A1-201ENST00000354547 ZCCHC24Q8N2G6 241 aaKnown RBP16.11■□□□□ 0.17
COL13A1-201ENST00000354547 OR4S2Q8NH73 311 aa16.11■□□□□ 0.17
COL13A1-201ENST00000354547 ANKRD11Q6UB99 2663 aaPredicted RBP16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms