RNA–Protein interactions for RNA: ENST00000349228.8

TNFSF13-202, Transcript of TNF superfamily member 13, humanhuman

TSL 1 (best) BASIC

Gene TNFSF13, Length 2,036 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-202ENST00000349228 TMEM140Q9NV12 185 aa12.79□□□□□ -0.36
TNFSF13-202ENST00000349228 PITPNC1Q9UKF7 332 aa12.79□□□□□ -0.36
TNFSF13-202ENST00000349228 IGHV3OR15-7A0A075B7D8 119 aa12.78□□□□□ -0.36
TNFSF13-202ENST00000349228 IFITM10A6NMD0 228 aa12.78□□□□□ -0.36
TNFSF13-202ENST00000349228 C11orf94C9JXX5 98 aa12.78□□□□□ -0.36
TNFSF13-202ENST00000349228 PRSS46E5RG02 174 aa12.78□□□□□ -0.36
TNFSF13-202ENST00000349228 FNDC10F2Z333 226 aa12.78□□□□□ -0.36
TNFSF13-202ENST00000349228 PHOX2AO14813 284 aa12.78□□□□□ -0.36
TNFSF13-202ENST00000349228 TM4SF5O14894 197 aa12.78□□□□□ -0.36
TNFSF13-202ENST00000349228 HMGB3O15347 200 aaKnown RBP12.78□□□□□ -0.36
TNFSF13-202ENST00000349228 GFRA3O60609 400 aa12.78□□□□□ -0.36
TNFSF13-202ENST00000349228 ZNF134P52741 427 aa12.78□□□□□ -0.36
TNFSF13-202ENST00000349228 HNF4GQ14541 408 aa12.78□□□□□ -0.36
TNFSF13-202ENST00000349228 C17orf58Q2M2W7 97 aa12.78□□□□□ -0.36
TNFSF13-202ENST00000349228 RPL39P5Q59GN2 51 aa12.78□□□□□ -0.36
TNFSF13-202ENST00000349228 SPNS3Q6ZMD2 512 aa12.78□□□□□ -0.36
TNFSF13-202ENST00000349228 HIST3H2BBQ8N257 126 aa12.78□□□□□ -0.36
TNFSF13-202ENST00000349228 OR51G1Q8NGK1 321 aa12.78□□□□□ -0.36
TNFSF13-202ENST00000349228 LINC00574Q9H8X3 128 aa12.78□□□□□ -0.36
TNFSF13-202ENST00000349228 NPVFQ9HCQ7 196 aa12.78□□□□□ -0.36
TNFSF13-202ENST00000349228 TCF19Q9Y242 345 aa12.78□□□□□ -0.36
TNFSF13-202ENST00000349228 FOXA2Q9Y261 457 aaPredicted RBP12.78□□□□□ -0.36
TNFSF13-202ENST00000349228 FAM215AQ9Y5M1 114 aa12.78□□□□□ -0.36
TNFSF13-202ENST00000349228 SPRY3O43610 288 aa12.78□□□□□ -0.36
TNFSF13-202ENST00000349228 HRASP01112 189 aa12.78□□□□□ -0.36
TNFSF13-202ENST00000349228 GYPAP02724 150 aa12.78□□□□□ -0.36
TNFSF13-202ENST00000349228 GALR1P47211 349 aa12.78□□□□□ -0.36
TNFSF13-202ENST00000349228 POU2AF1Q16633 256 aa12.78□□□□□ -0.36
TNFSF13-202ENST00000349228 TREML4Q6UXN2 200 aa12.78□□□□□ -0.36
TNFSF13-202ENST00000349228 SSX9Q7RTT3 188 aa12.78□□□□□ -0.36
TNFSF13-202ENST00000349228 Q8TCH9 128 aa12.78□□□□□ -0.36
TNFSF13-202ENST00000349228 CORO2AQ92828 525 aa12.78□□□□□ -0.36
TNFSF13-202ENST00000349228 TRAV20A0A0B4J274 112 aa12.77□□□□□ -0.37
TNFSF13-202ENST00000349228 ZNF729A6NN14 1252 aaPredicted RBP12.77□□□□□ -0.37
TNFSF13-202ENST00000349228 C15orf61A6NNL5 157 aa12.77□□□□□ -0.37
TNFSF13-202ENST00000349228 TMPRSS2O15393 492 aa12.77□□□□□ -0.37
TNFSF13-202ENST00000349228 CEACAM8P31997 349 aaPredicted RBP12.77□□□□□ -0.37
TNFSF13-202ENST00000349228 ATP5IP56385 69 aaPredicted RBP12.77□□□□□ -0.37
TNFSF13-202ENST00000349228 HSPE1P61604 102 aaKnown RBP12.77□□□□□ -0.37
TNFSF13-202ENST00000349228 RPS16P62249 146 aaKnown RBP12.77□□□□□ -0.37
TNFSF13-202ENST00000349228 RAB31Q13636 194 aa12.77□□□□□ -0.37
TNFSF13-202ENST00000349228 SSX3Q99909 188 aa12.77□□□□□ -0.37
TNFSF13-202ENST00000349228 CHODLQ9H9P2 273 aa12.77□□□□□ -0.37
TNFSF13-202ENST00000349228 ENY2Q9NPA8 101 aa12.77□□□□□ -0.37
TNFSF13-202ENST00000349228 PPP5D1E7EU14 171 aa12.76□□□□□ -0.37
TNFSF13-202ENST00000349228 CXorf1O96002 111 aa12.76□□□□□ -0.37
TNFSF13-202ENST00000349228 FAM3BP58499 235 aaPredicted RBP12.76□□□□□ -0.37
TNFSF13-202ENST00000349228 TNFAIP6P98066 277 aaPredicted RBP12.76□□□□□ -0.37
TNFSF13-202ENST00000349228 CT45A1Q5HYN5 189 aa12.76□□□□□ -0.37
TNFSF13-202ENST00000349228 STUMQ69YW2 141 aa12.76□□□□□ -0.37
TNFSF13-202ENST00000349228 CT45A3Q8NHU0 189 aa12.76□□□□□ -0.37
TNFSF13-202ENST00000349228 TMEM204Q9BSN7 226 aa12.76□□□□□ -0.37
TNFSF13-202ENST00000349228 TMEM14BQ9NUH8 114 aa12.76□□□□□ -0.37
TNFSF13-202ENST00000349228 RRHO14718 337 aa12.76□□□□□ -0.37
TNFSF13-202ENST00000349228 IGHV2-70P01814 119 aa12.76□□□□□ -0.37
TNFSF13-202ENST00000349228 RTP5Q14D33 572 aa12.76□□□□□ -0.37
TNFSF13-202ENST00000349228 KCNIP4Q6PIL6 250 aa12.76□□□□□ -0.37
TNFSF13-202ENST00000349228 GATAD1Q8WUU5 269 aa12.76□□□□□ -0.37
TNFSF13-202ENST00000349228 IMMP2LQ96T52 175 aa12.76□□□□□ -0.37
TNFSF13-202ENST00000349228 IDI2-AS1Q9NZ38 188 aa12.76□□□□□ -0.37
TNFSF13-202ENST00000349228 PXMP4Q9Y6I8 212 aa12.76□□□□□ -0.37
TNFSF13-202ENST00000349228 DMDP11532 3685 aa12.75□□□□□ -0.37
TNFSF13-202ENST00000349228 LINC00587B1AMM8 73 aa12.75□□□□□ -0.37
TNFSF13-202ENST00000349228 GGCTO75223 188 aaKnown RBP12.75□□□□□ -0.37
TNFSF13-202ENST00000349228 TYMSP04818 313 aa12.75□□□□□ -0.37
TNFSF13-202ENST00000349228 STAG3L2P0CL84 134 aa12.75□□□□□ -0.37
TNFSF13-202ENST00000349228 STAG3L3P0CL85 134 aa12.75□□□□□ -0.37
TNFSF13-202ENST00000349228 MRPS11P82912 194 aaKnown RBP12.75□□□□□ -0.37
TNFSF13-202ENST00000349228 RHOVQ96L33 236 aa12.75□□□□□ -0.37
TNFSF13-202ENST00000349228 TXN2Q99757 166 aa12.75□□□□□ -0.37
TNFSF13-202ENST00000349228 GGTLC1Q9BX51 225 aa12.75□□□□□ -0.37
TNFSF13-202ENST00000349228 MS4A5Q9H3V2 200 aa12.75□□□□□ -0.37
TNFSF13-202ENST00000349228 GCM1Q9NP62 436 aa12.75□□□□□ -0.37
TNFSF13-202ENST00000349228 PRNDQ9UKY0 176 aa12.75□□□□□ -0.37
TNFSF13-202ENST00000349228 LSM4Q9Y4Z0 139 aaKnown RBP12.75□□□□□ -0.37
TNFSF13-202ENST00000349228 SOD3P08294 240 aa12.74□□□□□ -0.37
TNFSF13-202ENST00000349228 LCN2P80188 198 aa12.74□□□□□ -0.37
TNFSF13-202ENST00000349228 PYY3Q5JQD4 70 aa12.74□□□□□ -0.37
TNFSF13-202ENST00000349228 VHLLQ6RSH7 139 aa12.74□□□□□ -0.37
TNFSF13-202ENST00000349228 ZNF439Q8NDP4 499 aa12.74□□□□□ -0.37
TNFSF13-202ENST00000349228 NUP37Q8NFH4 326 aa12.74□□□□□ -0.37
TNFSF13-202ENST00000349228 OR2T10Q8NGZ9 312 aa12.74□□□□□ -0.37
TNFSF13-202ENST00000349228 OR4X1Q8NH49 305 aa12.74□□□□□ -0.37
TNFSF13-202ENST00000349228 PLPPR2Q96GM1 343 aa12.74□□□□□ -0.37
TNFSF13-202ENST00000349228 MGST2Q99735 147 aa12.74□□□□□ -0.37
TNFSF13-202ENST00000349228 ZNF257Q9Y2Q1 563 aa12.74□□□□□ -0.37
TNFSF13-202ENST00000349228 FREM2Q5SZK8 3169 aa12.74□□□□□ -0.37
TNFSF13-202ENST00000349228 SAA2-SAA4A0A096LPE2 208 aa12.74□□□□□ -0.37
TNFSF13-202ENST00000349228 SLC31A2O15432 143 aa12.74□□□□□ -0.37
TNFSF13-202ENST00000349228 MT-CO2P00403 227 aa12.74□□□□□ -0.37
TNFSF13-202ENST00000349228 IGHV1-46P01743 117 aa12.74□□□□□ -0.37
TNFSF13-202ENST00000349228 SAA2P0DJI9 122 aaPredicted RBP12.74□□□□□ -0.37
TNFSF13-202ENST00000349228 IRF2P14316 349 aa12.74□□□□□ -0.37
TNFSF13-202ENST00000349228 NPY1RP25929 384 aa12.74□□□□□ -0.37
TNFSF13-202ENST00000349228 SPRNQ5BIV9 151 aa12.74□□□□□ -0.37
TNFSF13-202ENST00000349228 COA6Q5JTJ3 125 aaKnown RBP12.74□□□□□ -0.37
TNFSF13-202ENST00000349228 TEPPQ6URK8 271 aa12.74□□□□□ -0.37
TNFSF13-202ENST00000349228 ZNF788Q6ZQV5 615 aa12.74□□□□□ -0.37
TNFSF13-202ENST00000349228 SSX8Q7RTT4 187 aa12.74□□□□□ -0.37
TNFSF13-202ENST00000349228 ABHD12Q8N2K0 398 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms