RNA–Protein interactions for RNA: ENST00000344937.11

CLCN2-202, Transcript of chloride voltage-gated channel 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLCN2, Length 3,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2-202ENST00000344937 C11orf94C9JXX5 98 aa13.12□□□□□ -0.31
CLCN2-202ENST00000344937 NDUFB4O95168 129 aa13.12□□□□□ -0.31
CLCN2-202ENST00000344937 TYMSP04818 313 aa13.12□□□□□ -0.31
CLCN2-202ENST00000344937 C1QTNF9P0C862 333 aa13.12□□□□□ -0.31
CLCN2-202ENST00000344937 WDYHV1Q96HA8 205 aa13.12□□□□□ -0.31
CLCN2-202ENST00000344937 OR10P1Q8NGE3 313 aa13.12□□□□□ -0.31
CLCN2-202ENST00000344937 MANBALQ9NQG1 85 aa13.12□□□□□ -0.31
CLCN2-202ENST00000344937 CHTOPQ9Y3Y2 248 aaKnown RBP13.12□□□□□ -0.31
CLCN2-202ENST00000344937 C17orf98A8MV24 154 aa13.11□□□□□ -0.31
CLCN2-202ENST00000344937 SPINK4O60575 86 aa13.11□□□□□ -0.31
CLCN2-202ENST00000344937 PPBPP02775 128 aa13.11□□□□□ -0.31
CLCN2-202ENST00000344937 GABRA2P47869 451 aa13.11□□□□□ -0.31
CLCN2-202ENST00000344937 VKORC1L1Q8N0U8 176 aa13.11□□□□□ -0.31
CLCN2-202ENST00000344937 NUDT10Q8NFP7 164 aa13.11□□□□□ -0.31
CLCN2-202ENST00000344937 CMTM2Q8TAZ6 248 aa13.11□□□□□ -0.31
CLCN2-202ENST00000344937 PINX1Q96BK5 328 aaKnown RBP13.11□□□□□ -0.31
CLCN2-202ENST00000344937 POM121L2Q96KW2 1035 aa13.11□□□□□ -0.31
CLCN2-202ENST00000344937 SPRR3Q9UBC9 169 aa13.11□□□□□ -0.31
CLCN2-202ENST00000344937 ARFGEF3Q5TH69 2177 aa13.11□□□□□ -0.31
CLCN2-202ENST00000344937 ODAMA1E959 279 aa13.11□□□□□ -0.31
CLCN2-202ENST00000344937 FAM90A10PA6NDY2 464 aa13.11□□□□□ -0.31
CLCN2-202ENST00000344937 FAM90A18PA6NE21 464 aa13.11□□□□□ -0.31
CLCN2-202ENST00000344937 FAM90A16PA6NEW6 464 aa13.11□□□□□ -0.31
CLCN2-202ENST00000344937 FAM90A20PA6NIJ5 464 aa13.11□□□□□ -0.31
CLCN2-202ENST00000344937 FAM90A8PA6NJQ4 464 aa13.11□□□□□ -0.31
CLCN2-202ENST00000344937 FAM90A7PA6NKC0 464 aa13.11□□□□□ -0.31
CLCN2-202ENST00000344937 FAM90A22PA8MWA6 464 aa13.11□□□□□ -0.31
CLCN2-202ENST00000344937 FAM90A12PA8MX19 464 aa13.11□□□□□ -0.31
CLCN2-202ENST00000344937 FAM90A5PA8MXJ8 464 aa13.11□□□□□ -0.31
CLCN2-202ENST00000344937 FAM90A23PA8MXZ1 464 aa13.11□□□□□ -0.31
CLCN2-202ENST00000344937 FAM90A15PP0C7V4 464 aa13.11□□□□□ -0.31
CLCN2-202ENST00000344937 FAM90A13PP0C7W8 464 aa13.11□□□□□ -0.31
CLCN2-202ENST00000344937 FAM90A14PP0C7W9 464 aa13.11□□□□□ -0.31
CLCN2-202ENST00000344937 FAM90A24PP0C7X0 464 aa13.11□□□□□ -0.31
CLCN2-202ENST00000344937 SMIM15Q7Z3B0 74 aa13.11□□□□□ -0.31
CLCN2-202ENST00000344937 PSMG3Q9BT73 122 aaPredicted RBP13.11□□□□□ -0.31
CLCN2-202ENST00000344937 DCTN5Q9BTE1 182 aa13.11□□□□□ -0.31
CLCN2-202ENST00000344937 SPTBN4Q9H254 2564 aa13.11□□□□□ -0.31
CLCN2-202ENST00000344937 RYDENQ9NUL5 291 aaKnown RBP13.11□□□□□ -0.31
CLCN2-202ENST00000344937 SMG1Q96Q15 3661 aaKnown RBP13.11□□□□□ -0.31
CLCN2-202ENST00000344937 PRSS47A8MTI9 375 aa13.1□□□□□ -0.31
CLCN2-202ENST00000344937 NPPCP23582 126 aa13.1□□□□□ -0.31
CLCN2-202ENST00000344937 RPL15P61313 204 aaKnown RBP13.1□□□□□ -0.31
CLCN2-202ENST00000344937 WDR86Q86TI4 376 aa13.1□□□□□ -0.31
CLCN2-202ENST00000344937 SCCPDHQ8NBX0 429 aa13.1□□□□□ -0.31
CLCN2-202ENST00000344937 PSPNO60542 156 aa13.1□□□□□ -0.31
CLCN2-202ENST00000344937 IL3RAP26951 378 aa13.1□□□□□ -0.31
CLCN2-202ENST00000344937 UBE2NP61088 152 aaKnown RBP13.1□□□□□ -0.31
CLCN2-202ENST00000344937 EDDM3AQ14507 147 aa13.1□□□□□ -0.31
CLCN2-202ENST00000344937 Q6ZS49 121 aa13.1□□□□□ -0.31
CLCN2-202ENST00000344937 MDP1Q86V88 176 aa13.1□□□□□ -0.31
CLCN2-202ENST00000344937 GCNT2Q8N0V5 402 aa13.1□□□□□ -0.31
CLCN2-202ENST00000344937 ZNF114Q8NC26 417 aa13.1□□□□□ -0.31
CLCN2-202ENST00000344937 HSPB9Q9BQS6 159 aa13.1□□□□□ -0.31
CLCN2-202ENST00000344937 TUBG2Q9NRH3 451 aa13.1□□□□□ -0.31
CLCN2-202ENST00000344937 TRAPPC1Q9Y5R8 145 aa13.1□□□□□ -0.31
CLCN2-202ENST00000344937 COMPP49747 757 aaPredicted RBP13.1□□□□□ -0.31
CLCN2-202ENST00000344937 VPS25Q9BRG1 176 aa13.1□□□□□ -0.31
CLCN2-202ENST00000344937 AGMATQ9BSE5 352 aa13.1□□□□□ -0.31
CLCN2-202ENST00000344937 ABCA1O95477 2261 aa13.09□□□□□ -0.31
CLCN2-202ENST00000344937 LRP5LA4QPB2 252 aa13.09□□□□□ -0.31
CLCN2-202ENST00000344937 SLC25A6P12236 298 aa13.09□□□□□ -0.31
CLCN2-202ENST00000344937 RAC2P15153 192 aa13.09□□□□□ -0.31
CLCN2-202ENST00000344937 UNQ5815/PRO19632Q6UWF5 114 aa13.09□□□□□ -0.31
CLCN2-202ENST00000344937 RNF24Q9Y225 148 aa13.09□□□□□ -0.31
CLCN2-202ENST00000344937 TRGV5A0A0B4J1U4 118 aa13.09□□□□□ -0.31
CLCN2-202ENST00000344937 TOMM40O96008 361 aa13.09□□□□□ -0.31
CLCN2-202ENST00000344937 SSTR5P35346 364 aa13.09□□□□□ -0.31
CLCN2-202ENST00000344937 TMEM178AQ8NBL3 297 aa13.09□□□□□ -0.31
CLCN2-202ENST00000344937 Q8NFD4 153 aa13.09□□□□□ -0.31
CLCN2-202ENST00000344937 LSM10Q969L4 123 aaKnown RBP13.09□□□□□ -0.31
CLCN2-202ENST00000344937 OBP2BQ9NPH6 170 aa13.09□□□□□ -0.31
CLCN2-202ENST00000344937 CTXND1A0A1B0GTU2 59 aa13.08□□□□□ -0.32
CLCN2-202ENST00000344937 COX5AP20674 150 aa13.08□□□□□ -0.32
CLCN2-202ENST00000344937 Q6P435 159 aa13.08□□□□□ -0.32
CLCN2-202ENST00000344937 H2BFWTQ7Z2G1 175 aa13.08□□□□□ -0.32
CLCN2-202ENST00000344937 NEIL1Q96FI4 390 aaPredicted RBP13.08□□□□□ -0.32
CLCN2-202ENST00000344937 NPCDR1Q9BY65 106 aa13.08□□□□□ -0.32
CLCN2-202ENST00000344937 HEATR1Q9H583 2144 aaKnown RBP13.08□□□□□ -0.32
CLCN2-202ENST00000344937 TP53TG3Q9ULZ0 132 aa13.08□□□□□ -0.32
CLCN2-202ENST00000344937 LINC00310P59036 64 aa13.08□□□□□ -0.32
CLCN2-202ENST00000344937 SGMS2Q8NHU3 365 aa13.08□□□□□ -0.32
CLCN2-202ENST00000344937 NINJ1Q92982 152 aa13.08□□□□□ -0.32
CLCN2-202ENST00000344937 LAMTOR2Q9Y2Q5 125 aa13.08□□□□□ -0.32
CLCN2-202ENST00000344937 A0A1W2PPV4 95 aa13.08□□□□□ -0.32
CLCN2-202ENST00000344937 LINC01551Q86U37 167 aa13.08□□□□□ -0.32
CLCN2-202ENST00000344937 SSMEM1Q8WWF3 244 aa13.08□□□□□ -0.32
CLCN2-202ENST00000344937 KCNIP1Q9NZI2 227 aa13.08□□□□□ -0.32
CLCN2-202ENST00000344937 PSG11Q9UQ72 335 aa13.08□□□□□ -0.32
CLCN2-202ENST00000344937 PXMP4Q9Y6I8 212 aa13.08□□□□□ -0.32
CLCN2-202ENST00000344937 CDC34P49427 236 aaPredicted RBP13.07□□□□□ -0.32
CLCN2-202ENST00000344937 SAXO1Q8IYX7 474 aa13.07□□□□□ -0.32
CLCN2-202ENST00000344937 C5orf30Q96GV9 206 aa13.07□□□□□ -0.32
CLCN2-202ENST00000344937 TNCP24821 2201 aa13.07□□□□□ -0.32
CLCN2-202ENST00000344937 IGKV3D-15A0A087WSY6 115 aa13.07□□□□□ -0.32
CLCN2-202ENST00000344937 LYZL6O75951 148 aa13.07□□□□□ -0.32
CLCN2-202ENST00000344937 TMEM147Q9BVK8 224 aa13.07□□□□□ -0.32
CLCN2-202ENST00000344937 SLC45A2Q9UMX9 530 aa13.07□□□□□ -0.32
CLCN2-202ENST00000344937 WIPI2Q9Y4P8 454 aa13.07□□□□□ -0.32
CLCN2-202ENST00000344937 RNF114Q9Y508 228 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms