RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 FAM223AQ8IWN6 122 aa9.48□□□□□ -0.89
SGCA-202ENST00000344627 VSTM2AQ8TAG5 236 aa9.48□□□□□ -0.89
SGCA-202ENST00000344627 SLC25A38Q96DW6 304 aa9.48□□□□□ -0.89
SGCA-202ENST00000344627 SLC5A7Q9GZV3 580 aa9.48□□□□□ -0.89
SGCA-202ENST00000344627 IFT46Q9NQC8 304 aa9.48□□□□□ -0.89
SGCA-202ENST00000344627 CCL28Q9NRJ3 127 aa9.48□□□□□ -0.89
SGCA-202ENST00000344627 STAB2Q8WWQ8 2551 aa9.48□□□□□ -0.89
SGCA-202ENST00000344627 A0A0A6YYH2 397 aa9.47□□□□□ -0.89
SGCA-202ENST00000344627 A6NJ64 397 aa9.47□□□□□ -0.89
SGCA-202ENST00000344627 AIREO43918 545 aa9.47□□□□□ -0.89
SGCA-202ENST00000344627 HRASP01112 189 aa9.47□□□□□ -0.89
SGCA-202ENST00000344627 KIR2DS2P43631 304 aa9.47□□□□□ -0.89
SGCA-202ENST00000344627 LSM3P62310 102 aaKnown RBP9.47□□□□□ -0.89
SGCA-202ENST00000344627 TIMM50Q3ZCQ8 353 aa9.47□□□□□ -0.89
SGCA-202ENST00000344627 LCN12Q6JVE5 192 aa9.47□□□□□ -0.89
SGCA-202ENST00000344627 ZNF66Q6ZN08 573 aa9.47□□□□□ -0.89
SGCA-202ENST00000344627 HOGA1Q86XE5 327 aa9.47□□□□□ -0.89
SGCA-202ENST00000344627 Q8N1Y9 231 aa9.47□□□□□ -0.89
SGCA-202ENST00000344627 Q8N402 240 aa9.47□□□□□ -0.89
SGCA-202ENST00000344627 TSPAN14Q8NG11 270 aa9.47□□□□□ -0.89
SGCA-202ENST00000344627 OR13F1Q8NGS4 319 aa9.47□□□□□ -0.89
SGCA-202ENST00000344627 AUNIPQ9H7T9 357 aa9.47□□□□□ -0.89
SGCA-202ENST00000344627 HRASLSQ9HDD0 168 aa9.47□□□□□ -0.89
SGCA-202ENST00000344627 PEMTQ9UBM1 199 aa9.47□□□□□ -0.89
SGCA-202ENST00000344627 SULT1C2O00338 296 aa9.46□□□□□ -0.9
SGCA-202ENST00000344627 KBTBD11O94819 623 aa9.46□□□□□ -0.9
SGCA-202ENST00000344627 CBX5P45973 191 aa9.46□□□□□ -0.9
SGCA-202ENST00000344627 HERV-K104P61576 105 aa9.46□□□□□ -0.9
SGCA-202ENST00000344627 ZNF45Q02386 682 aa9.46□□□□□ -0.9
SGCA-202ENST00000344627 C15orf32Q32M92 178 aa9.46□□□□□ -0.9
SGCA-202ENST00000344627 LAX1Q8IWV1 398 aa9.46□□□□□ -0.9
SGCA-202ENST00000344627 SPAG16Q8N0X2 631 aa9.46□□□□□ -0.9
SGCA-202ENST00000344627 TTC9CQ8N5M4 171 aa9.46□□□□□ -0.9
SGCA-202ENST00000344627 NECAP1Q8NC96 275 aa9.46□□□□□ -0.9
SGCA-202ENST00000344627 S100A16Q96FQ6 103 aaKnown RBP9.46□□□□□ -0.9
SGCA-202ENST00000344627 AIFM2Q9BRQ8 373 aa9.46□□□□□ -0.9
SGCA-202ENST00000344627 MRPS26Q9BYN8 205 aaKnown RBP9.46□□□□□ -0.9
SGCA-202ENST00000344627 TUBA4BQ9H853 241 aa9.46□□□□□ -0.9
SGCA-202ENST00000344627 EDA2RQ9HAV5 297 aa9.46□□□□□ -0.9
SGCA-202ENST00000344627 FBXL7Q9UJT9 491 aa9.46□□□□□ -0.9
SGCA-202ENST00000344627 PPYP01298 95 aa9.45□□□□□ -0.9
SGCA-202ENST00000344627 IGHV3-23P01764 117 aa9.45□□□□□ -0.9
SGCA-202ENST00000344627 CSN3P07498 182 aa9.45□□□□□ -0.9
SGCA-202ENST00000344627 DEFA4P12838 97 aa9.45□□□□□ -0.9
SGCA-202ENST00000344627 MAS1LP35410 378 aa9.45□□□□□ -0.9
SGCA-202ENST00000344627 TGFBR1P36897 503 aa9.45□□□□□ -0.9
SGCA-202ENST00000344627 CATR1Q13166 79 aa9.45□□□□□ -0.9
SGCA-202ENST00000344627 EIF4EBP1Q13541 118 aaPredicted RBP9.45□□□□□ -0.9
SGCA-202ENST00000344627 IL34Q6ZMJ4 242 aa9.45□□□□□ -0.9
SGCA-202ENST00000344627 C19orf35Q6ZS72 473 aa9.45□□□□□ -0.9
SGCA-202ENST00000344627 TMEM17Q86X19 198 aa9.45□□□□□ -0.9
SGCA-202ENST00000344627 CROCCP3Q8IVE0 287 aa9.45□□□□□ -0.9
SGCA-202ENST00000344627 PUSL1Q8N0Z8 303 aaKnown RBP9.45□□□□□ -0.9
SGCA-202ENST00000344627 ZBTB34Q8NCN2 500 aa9.45□□□□□ -0.9
SGCA-202ENST00000344627 OR51H1Q8NH63 302 aa9.45□□□□□ -0.9
SGCA-202ENST00000344627 TMEM167AQ8TBQ9 72 aa9.45□□□□□ -0.9
SGCA-202ENST00000344627 DYNLRB2Q8TF09 96 aa9.45□□□□□ -0.9
SGCA-202ENST00000344627 ZNF257Q9Y2Q1 563 aa9.45□□□□□ -0.9
SGCA-202ENST00000344627 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.44□□□□□ -0.9
SGCA-202ENST00000344627 TRBV9A0A0B4J1U6 114 aa9.44□□□□□ -0.9
SGCA-202ENST00000344627 TEX22C9J3V5 150 aa9.44□□□□□ -0.9
SGCA-202ENST00000344627 PPP5D1E7EU14 171 aa9.44□□□□□ -0.9
SGCA-202ENST00000344627 E7EUB6 86 aa9.44□□□□□ -0.9
SGCA-202ENST00000344627 BMPR1BO00238 502 aa9.44□□□□□ -0.9
SGCA-202ENST00000344627 XRCC3O43542 346 aa9.44□□□□□ -0.9
SGCA-202ENST00000344627 DHFRP00374 187 aa9.44□□□□□ -0.9
SGCA-202ENST00000344627 REG1AP05451 166 aa9.44□□□□□ -0.9
SGCA-202ENST00000344627 IL6RP08887 468 aaPredicted RBP9.44□□□□□ -0.9
SGCA-202ENST00000344627 MYOD1P15172 320 aa9.44□□□□□ -0.9
SGCA-202ENST00000344627 HLA-GP17693 338 aa9.44□□□□□ -0.9
SGCA-202ENST00000344627 BRWD1-AS2P59051 145 aa9.44□□□□□ -0.9
SGCA-202ENST00000344627 RPL8P62917 257 aaKnown RBP9.44□□□□□ -0.9
SGCA-202ENST00000344627 UBE2NLQ5JXB2 153 aa9.44□□□□□ -0.9
SGCA-202ENST00000344627 TMEM69Q5SWH9 247 aa9.44□□□□□ -0.9
SGCA-202ENST00000344627 AADACL3Q5VUY0 350 aa9.44□□□□□ -0.9
SGCA-202ENST00000344627 SAMD12Q8N8I0 201 aa9.44□□□□□ -0.9
SGCA-202ENST00000344627 DMBX1Q8NFW5 382 aa9.44□□□□□ -0.9
SGCA-202ENST00000344627 OR5AP2Q8NGF4 316 aa9.44□□□□□ -0.9
SGCA-202ENST00000344627 SLC2A9Q9NRM0 540 aa9.44□□□□□ -0.9
SGCA-202ENST00000344627 EHFQ9NZC4 300 aa9.44□□□□□ -0.9
SGCA-202ENST00000344627 S4R3C0 116 aa9.44□□□□□ -0.9
SGCA-202ENST00000344627 SACSQ9NZJ4 4579 aa9.44□□□□□ -0.9
SGCA-202ENST00000344627 IZUMO1RA6ND01 250 aa9.43□□□□□ -0.9
SGCA-202ENST00000344627 NPIPB5A8MRT5 1133 aa9.43□□□□□ -0.9
SGCA-202ENST00000344627 TMEM127O75204 238 aa9.43□□□□□ -0.9
SGCA-202ENST00000344627 GGCTO75223 188 aaKnown RBP9.43□□□□□ -0.9
SGCA-202ENST00000344627 HLA-AP01891 365 aaKnown RBP9.43□□□□□ -0.9
SGCA-202ENST00000344627 PMP2P02689 132 aa9.43□□□□□ -0.9
SGCA-202ENST00000344627 AREGP15514 252 aa9.43□□□□□ -0.9
SGCA-202ENST00000344627 RPA2P15927 270 aa9.43□□□□□ -0.9
SGCA-202ENST00000344627 RPS19P39019 145 aaKnown RBP9.43□□□□□ -0.9
SGCA-202ENST00000344627 MSMO1Q15800 293 aa9.43□□□□□ -0.9
SGCA-202ENST00000344627 OR4A47Q6IF82 309 aa9.43□□□□□ -0.9
SGCA-202ENST00000344627 CLEC19AQ6UXS0 136 aa9.43□□□□□ -0.9
SGCA-202ENST00000344627 GIMAP1Q8WWP7 306 aa9.43□□□□□ -0.9
SGCA-202ENST00000344627 DNAH1Q9P2D7 4330 aa9.43□□□□□ -0.9
SGCA-202ENST00000344627 ZNF320A2RRD8 509 aa9.42□□□□□ -0.9
SGCA-202ENST00000344627 JTBO76095 146 aa9.42□□□□□ -0.9
SGCA-202ENST00000344627 NDUFB8O95169 186 aa9.42□□□□□ -0.9
SGCA-202ENST00000344627 OR2C1O95371 312 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms