RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 SLC35B3Q9H1N7 401 aa13.78□□□□□ -0.2
SMARCA4-201ENST00000344626 SFTA3P0C7M3 94 aa13.77□□□□□ -0.2
SMARCA4-201ENST00000344626 SERF2P84101 59 aa13.77□□□□□ -0.2
SMARCA4-201ENST00000344626 NPDC1Q9NQX5 325 aaPredicted RBP13.77□□□□□ -0.2
SMARCA4-201ENST00000344626 TCF19Q9Y242 345 aa13.77□□□□□ -0.2
SMARCA4-201ENST00000344626 A0A1W2PPQ1 181 aa13.77□□□□□ -0.2
SMARCA4-201ENST00000344626 RND2P52198 227 aa13.77□□□□□ -0.2
SMARCA4-201ENST00000344626 RPL39P5Q59GN2 51 aa13.77□□□□□ -0.2
SMARCA4-201ENST00000344626 LYZL4Q96KX0 146 aa13.77□□□□□ -0.2
SMARCA4-201ENST00000344626 CENPFP49454 3210 aa13.77□□□□□ -0.2
SMARCA4-201ENST00000344626 IGSF23A1L1A6 192 aa13.77□□□□□ -0.21
SMARCA4-201ENST00000344626 OR10J6PQ8NGY7 276 aa13.77□□□□□ -0.21
SMARCA4-201ENST00000344626 C11orf94C9JXX5 98 aa13.77□□□□□ -0.21
SMARCA4-201ENST00000344626 TRGV3P03979 118 aa13.77□□□□□ -0.21
SMARCA4-201ENST00000344626 TNFRSF9Q07011 255 aa13.77□□□□□ -0.21
SMARCA4-201ENST00000344626 PLCE1Q9P212 2302 aa13.77□□□□□ -0.21
SMARCA4-201ENST00000344626 J3KRW8 73 aa13.77□□□□□ -0.21
SMARCA4-201ENST00000344626 RPL35P42766 123 aaKnown RBP13.77□□□□□ -0.21
SMARCA4-201ENST00000344626 TMEM133Q9H2Q1 129 aa13.77□□□□□ -0.21
SMARCA4-201ENST00000344626 SLC2A8Q9NY64 477 aa13.77□□□□□ -0.21
SMARCA4-201ENST00000344626 IGHV3-35A0A0C4DH35 117 aa13.76□□□□□ -0.21
SMARCA4-201ENST00000344626 SLC25A16P16260 332 aa13.76□□□□□ -0.21
SMARCA4-201ENST00000344626 IZUMO4Q1ZYL8 232 aa13.76□□□□□ -0.21
SMARCA4-201ENST00000344626 TM4SF20Q53R12 229 aa13.76□□□□□ -0.21
SMARCA4-201ENST00000344626 PLAC9Q5JTB6 97 aa13.76□□□□□ -0.21
SMARCA4-201ENST00000344626 PLSCR2Q9NRY7 297 aa13.76□□□□□ -0.21
SMARCA4-201ENST00000344626 H0Y8G0 127 aa13.76□□□□□ -0.21
SMARCA4-201ENST00000344626 LINC00869P0C866 280 aa13.76□□□□□ -0.21
SMARCA4-201ENST00000344626 P2RY4P51582 365 aa13.76□□□□□ -0.21
SMARCA4-201ENST00000344626 C3orf56Q8N813 242 aa13.76□□□□□ -0.21
SMARCA4-201ENST00000344626 PXMP4Q9Y6I8 212 aa13.76□□□□□ -0.21
SMARCA4-201ENST00000344626 MALRD1Q5VYJ5 2156 aa13.76□□□□□ -0.21
SMARCA4-201ENST00000344626 SEC11BP0C7V7 166 aa13.76□□□□□ -0.21
SMARCA4-201ENST00000344626 LRRC75BQ2VPJ9 315 aa13.76□□□□□ -0.21
SMARCA4-201ENST00000344626 RBFOX3A6NFN3 312 aa13.76□□□□□ -0.21
SMARCA4-201ENST00000344626 SIGLEC5O15389 551 aa13.76□□□□□ -0.21
SMARCA4-201ENST00000344626 PDE6DO43924 150 aa13.76□□□□□ -0.21
SMARCA4-201ENST00000344626 DEDDO75618 318 aa13.76□□□□□ -0.21
SMARCA4-201ENST00000344626 MELTFP08582 738 aa13.76□□□□□ -0.21
SMARCA4-201ENST00000344626 BPIFA4PQ86YQ2 179 aa13.76□□□□□ -0.21
SMARCA4-201ENST00000344626 OR52M1Q8NGK5 317 aa13.76□□□□□ -0.21
SMARCA4-201ENST00000344626 PRSS22Q9GZN4 317 aa13.76□□□□□ -0.21
SMARCA4-201ENST00000344626 CXCL3P19876 107 aa13.75□□□□□ -0.21
SMARCA4-201ENST00000344626 ZNF345Q14585 488 aa13.75□□□□□ -0.21
SMARCA4-201ENST00000344626 H1FOOQ8IZA3 346 aaPredicted RBP13.75□□□□□ -0.21
SMARCA4-201ENST00000344626 GTF3AQ92664 365 aaKnown RBP13.75□□□□□ -0.21
SMARCA4-201ENST00000344626 SLC25A28Q96A46 364 aa13.75□□□□□ -0.21
SMARCA4-201ENST00000344626 C7orf66A4D0T2 115 aa13.75□□□□□ -0.21
SMARCA4-201ENST00000344626 TMEM252Q8N6L7 170 aa13.75□□□□□ -0.21
SMARCA4-201ENST00000344626 PTBP3O95758 552 aaKnown RBP13.75□□□□□ -0.21
SMARCA4-201ENST00000344626 KIAA0141Q14154 515 aaPredicted RBP13.75□□□□□ -0.21
SMARCA4-201ENST00000344626 YPEL1O60688 119 aa13.75□□□□□ -0.21
SMARCA4-201ENST00000344626 CD24P25063 80 aa13.75□□□□□ -0.21
SMARCA4-201ENST00000344626 PPP1R27Q86WC6 154 aa13.75□□□□□ -0.21
SMARCA4-201ENST00000344626 PAQR4Q8N4S7 273 aaPredicted RBP13.75□□□□□ -0.21
SMARCA4-201ENST00000344626 MRPL30Q8TCC3 161 aaKnown RBP13.75□□□□□ -0.21
SMARCA4-201ENST00000344626 TNFRSF14Q92956 283 aa13.75□□□□□ -0.21
SMARCA4-201ENST00000344626 YPEL2Q96QA6 119 aa13.75□□□□□ -0.21
SMARCA4-201ENST00000344626 VAX2Q9UIW0 290 aa13.75□□□□□ -0.21
SMARCA4-201ENST00000344626 A0A1W2PNU3 283 aaPredicted RBP13.74□□□□□ -0.21
SMARCA4-201ENST00000344626 ORM1P02763 201 aa13.74□□□□□ -0.21
SMARCA4-201ENST00000344626 OR11H7Q8NGC8 314 aa13.74□□□□□ -0.21
SMARCA4-201ENST00000344626 NPPCP23582 126 aa13.74□□□□□ -0.21
SMARCA4-201ENST00000344626 C5orf66Q9H5L9 145 aa13.74□□□□□ -0.21
SMARCA4-201ENST00000344626 ELF5Q9UKW6 265 aaPredicted RBP13.74□□□□□ -0.21
SMARCA4-201ENST00000344626 TMEM56-RWDD3S4R434 201 aa13.74□□□□□ -0.21
SMARCA4-201ENST00000344626 KIAA2026Q5HYC2 2103 aa13.74□□□□□ -0.21
SMARCA4-201ENST00000344626 FAM157CP0CG43 387 aa13.74□□□□□ -0.21
SMARCA4-201ENST00000344626 TMEM78Q5T7P6 136 aa13.74□□□□□ -0.21
SMARCA4-201ENST00000344626 COLCA1Q6ZS62 124 aa13.74□□□□□ -0.21
SMARCA4-201ENST00000344626 OR10S1Q8NGN2 331 aa13.74□□□□□ -0.21
SMARCA4-201ENST00000344626 E7EQL1 145 aa13.74□□□□□ -0.21
SMARCA4-201ENST00000344626 ZNF735P0CB33 412 aa13.74□□□□□ -0.21
SMARCA4-201ENST00000344626 FBXL15Q9H469 300 aa13.74□□□□□ -0.21
SMARCA4-201ENST00000344626 FBLN5Q9UBX5 448 aa13.74□□□□□ -0.21
SMARCA4-201ENST00000344626 TNFSF18Q9UNG2 199 aa13.74□□□□□ -0.21
SMARCA4-201ENST00000344626 CLDN16Q9Y5I7 305 aa13.74□□□□□ -0.21
SMARCA4-201ENST00000344626 SLC16A13Q7RTY0 426 aa13.73□□□□□ -0.21
SMARCA4-201ENST00000344626 LRRK2Q5S007 2527 aa13.73□□□□□ -0.21
SMARCA4-201ENST00000344626 TFF1P04155 84 aa13.73□□□□□ -0.21
SMARCA4-201ENST00000344626 RPS11P62280 158 aaKnown RBP eCLIP13.73□□□□□ -0.21
SMARCA4-201ENST00000344626 FA2HQ7L5A8 372 aa13.73□□□□□ -0.21
SMARCA4-201ENST00000344626 FAM216AQ8WUB2 273 aa13.73□□□□□ -0.21
SMARCA4-201ENST00000344626 TMEM204Q9BSN7 226 aa13.73□□□□□ -0.21
SMARCA4-201ENST00000344626 C2orf16Q68DN1 1984 aa13.73□□□□□ -0.21
SMARCA4-201ENST00000344626 P01737 135 aa13.73□□□□□ -0.21
SMARCA4-201ENST00000344626 HLA-DRB5Q30154 266 aa13.73□□□□□ -0.21
SMARCA4-201ENST00000344626 LGALSLQ3ZCW2 172 aaPredicted RBP13.73□□□□□ -0.21
SMARCA4-201ENST00000344626 ARPC1AQ92747 370 aa13.73□□□□□ -0.21
SMARCA4-201ENST00000344626 SLX1AQ9BQ83 275 aa13.73□□□□□ -0.21
SMARCA4-201ENST00000344626 TUBA4BQ9H853 241 aa13.73□□□□□ -0.21
SMARCA4-201ENST00000344626 SRRM5B3KS81 715 aa13.73□□□□□ -0.21
SMARCA4-201ENST00000344626 RND3P61587 244 aa13.73□□□□□ -0.21
SMARCA4-201ENST00000344626 TMEM187Q14656 261 aa13.73□□□□□ -0.21
SMARCA4-201ENST00000344626 BRD3OSQ6XYD6 125 aa13.73□□□□□ -0.21
SMARCA4-201ENST00000344626 C5orf17Q8NAS9 161 aa13.73□□□□□ -0.21
SMARCA4-201ENST00000344626 C8orf46Q8TAG6 207 aa13.73□□□□□ -0.21
SMARCA4-201ENST00000344626 GPHA2Q96T91 129 aa13.73□□□□□ -0.21
SMARCA4-201ENST00000344626 ATP6V0CP27449 155 aa13.72□□□□□ -0.21
SMARCA4-201ENST00000344626 ZNF738Q8NE65 137 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms