RNA–Protein interactions for RNA: ENST00000344204.8

TRIO-202, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIO, Length 11,100 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-202ENST00000344204 IGHV3-43A0A0B4J1X8 118 aa11.73□□□□□ -0.53
TRIO-202ENST00000344204 IGHV3-43DP0DP04 118 aa11.73□□□□□ -0.53
TRIO-202ENST00000344204 RNFT1Q5M7Z0 435 aa11.73□□□□□ -0.53
TRIO-202ENST00000344204 PLA2G3Q9NZ20 509 aa11.73□□□□□ -0.53
TRIO-202ENST00000344204 TMSB15BA0A087X1C1 80 aa11.73□□□□□ -0.53
TRIO-202ENST00000344204 K7ESF4 209 aa11.72□□□□□ -0.53
TRIO-202ENST00000344204 SOX8P57073 446 aa11.72□□□□□ -0.53
TRIO-202ENST00000344204 ADAMTSL5Q6ZMM2 481 aa11.72□□□□□ -0.53
TRIO-202ENST00000344204 MVB12AQ96EY5 273 aa11.72□□□□□ -0.53
TRIO-202ENST00000344204 NPVFQ9HCQ7 196 aa11.72□□□□□ -0.53
TRIO-202ENST00000344204 MS4A18H0YCH9 400 aa11.72□□□□□ -0.53
TRIO-202ENST00000344204 MS4A18Q3C1V0 323 aa11.72□□□□□ -0.53
TRIO-202ENST00000344204 PLPPR2Q96GM1 343 aa11.72□□□□□ -0.53
TRIO-202ENST00000344204 MUC21A0A0G2JKD1 596 aa11.72□□□□□ -0.53
TRIO-202ENST00000344204 MUC21A0A140T8X8 626 aa11.72□□□□□ -0.53
TRIO-202ENST00000344204 LGALS3P17931 250 aaKnown RBP11.72□□□□□ -0.53
TRIO-202ENST00000344204 MUC21Q5SSG8 566 aa11.72□□□□□ -0.53
TRIO-202ENST00000344204 TTC9CQ8N5M4 171 aa11.72□□□□□ -0.53
TRIO-202ENST00000344204 CRYBB3P26998 211 aa11.72□□□□□ -0.53
TRIO-202ENST00000344204 GPR3P46089 330 aa11.72□□□□□ -0.53
TRIO-202ENST00000344204 TNS1Q9HBL0 1735 aaKnown RBP11.72□□□□□ -0.53
TRIO-202ENST00000344204 KRTCAP3Q53RY4 240 aa11.72□□□□□ -0.53
TRIO-202ENST00000344204 MRGPRX1Q96LB2 322 aa11.72□□□□□ -0.53
TRIO-202ENST00000344204 COL16A1Q07092 1604 aaPredicted RBP11.72□□□□□ -0.53
TRIO-202ENST00000344204 Q96M66 194 aa11.72□□□□□ -0.53
TRIO-202ENST00000344204 LRRC61Q9BV99 259 aa11.72□□□□□ -0.53
TRIO-202ENST00000344204 A0A1W2PP11 408 aa11.72□□□□□ -0.53
TRIO-202ENST00000344204 C19orf24Q9BVV8 132 aa11.72□□□□□ -0.53
TRIO-202ENST00000344204 GLRX2Q9NS18 164 aa11.72□□□□□ -0.53
TRIO-202ENST00000344204 HIGD1AQ9Y241 93 aa11.72□□□□□ -0.53
TRIO-202ENST00000344204 MYO18BQ8IUG5 2567 aa11.72□□□□□ -0.53
TRIO-202ENST00000344204 SCO2A0A1W2PP80 73 aa11.72□□□□□ -0.53
TRIO-202ENST00000344204 ZNF385AQ96PM9 386 aaKnown RBP11.72□□□□□ -0.53
TRIO-202ENST00000344204 HYPMO75409 117 aa11.71□□□□□ -0.53
TRIO-202ENST00000344204 CLDN14O95500 239 aa11.71□□□□□ -0.53
TRIO-202ENST00000344204 TIMP4Q99727 224 aa11.71□□□□□ -0.53
TRIO-202ENST00000344204 TRAV8-6A0A0B4J262 113 aa11.71□□□□□ -0.53
TRIO-202ENST00000344204 MRAP2Q96G30 205 aa11.71□□□□□ -0.53
TRIO-202ENST00000344204 WFDC1Q9HC57 220 aa11.71□□□□□ -0.53
TRIO-202ENST00000344204 TMEM160Q9NX00 188 aa11.71□□□□□ -0.53
TRIO-202ENST00000344204 KLF4O43474 513 aa11.71□□□□□ -0.53
TRIO-202ENST00000344204 TECTAO75443 2155 aa11.71□□□□□ -0.53
TRIO-202ENST00000344204 RPS20P60866 119 aaKnown RBP11.71□□□□□ -0.53
TRIO-202ENST00000344204 SSBP3Q9BWW4 388 aaPredicted RBP11.71□□□□□ -0.53
TRIO-202ENST00000344204 PRSS47A8MTI9 375 aa11.71□□□□□ -0.54
TRIO-202ENST00000344204 DSCR4P56555 118 aaPredicted RBP11.71□□□□□ -0.54
TRIO-202ENST00000344204 PGLYRP1O75594 196 aaPredicted RBP11.71□□□□□ -0.54
TRIO-202ENST00000344204 HS3ST3B1Q9Y662 390 aa11.71□□□□□ -0.54
TRIO-202ENST00000344204 LTBP3Q9NS15 1303 aa11.71□□□□□ -0.54
TRIO-202ENST00000344204 OR1L8Q8NGR8 309 aa11.7□□□□□ -0.54
TRIO-202ENST00000344204 KIR3DS1Q14943 382 aa11.7□□□□□ -0.54
TRIO-202ENST00000344204 CHCHD1Q96BP2 118 aaKnown RBP11.7□□□□□ -0.54
TRIO-202ENST00000344204 GNRHR2Q96P88 292 aa11.7□□□□□ -0.54
TRIO-202ENST00000344204 CENPVL1A0A0U1RR11 272 aa11.7□□□□□ -0.54
TRIO-202ENST00000344204 CRXO43186 299 aaPredicted RBP11.7□□□□□ -0.54
TRIO-202ENST00000344204 CDKN3Q16667 212 aa11.7□□□□□ -0.54
TRIO-202ENST00000344204 FOXB1Q99853 325 aa11.7□□□□□ -0.54
TRIO-202ENST00000344204 ZNF735P0CB33 412 aa11.7□□□□□ -0.54
TRIO-202ENST00000344204 FOXA3P55318 350 aaPredicted RBP11.7□□□□□ -0.54
TRIO-202ENST00000344204 TMEM256Q8N2U0 113 aa11.7□□□□□ -0.54
TRIO-202ENST00000344204 POU2F2P09086 479 aa11.7□□□□□ -0.54
TRIO-202ENST00000344204 VN1R4Q7Z5H5 301 aa11.7□□□□□ -0.54
TRIO-202ENST00000344204 CXorf67Q86X51 503 aaPredicted RBP11.7□□□□□ -0.54
TRIO-202ENST00000344204 RASL11BQ9BPW5 248 aa11.7□□□□□ -0.54
TRIO-202ENST00000344204 CSTL1Q9H114 145 aa11.7□□□□□ -0.54
TRIO-202ENST00000344204 CYTL1Q9NRR1 136 aa11.7□□□□□ -0.54
TRIO-202ENST00000344204 APOHP02749 345 aaPredicted RBP11.7□□□□□ -0.54
TRIO-202ENST00000344204 AGMATQ9BSE5 352 aa11.7□□□□□ -0.54
TRIO-202ENST00000344204 LRRC75BQ2VPJ9 315 aa11.7□□□□□ -0.54
TRIO-202ENST00000344204 PRSS41Q7RTY9 318 aa11.7□□□□□ -0.54
TRIO-202ENST00000344204 RPS19BP1Q86WX3 136 aaKnown RBP11.7□□□□□ -0.54
TRIO-202ENST00000344204 CDIPTO14735 213 aa11.7□□□□□ -0.54
TRIO-202ENST00000344204 CEACAM5P06731 702 aa11.7□□□□□ -0.54
TRIO-202ENST00000344204 TBR1Q16650 682 aa11.7□□□□□ -0.54
TRIO-202ENST00000344204 LGALS4P56470 323 aa11.69□□□□□ -0.54
TRIO-202ENST00000344204 C18orf12Q96KH6 178 aa11.69□□□□□ -0.54
TRIO-202ENST00000344204 TMEM14DPA8MWL7 114 aa11.69□□□□□ -0.54
TRIO-202ENST00000344204 ZXDCQ2QGD7 858 aaPredicted RBP11.69□□□□□ -0.54
TRIO-202ENST00000344204 DEFB132Q7Z7B7 95 aa11.69□□□□□ -0.54
TRIO-202ENST00000344204 NFAM1Q8NET5 270 aaPredicted RBP11.69□□□□□ -0.54
TRIO-202ENST00000344204 ZNF479Q96JC4 524 aa11.69□□□□□ -0.54
TRIO-202ENST00000344204 SFXN3Q9BWM7 321 aa11.69□□□□□ -0.54
TRIO-202ENST00000344204 RPP21Q9H633 154 aaKnown RBP11.69□□□□□ -0.54
TRIO-202ENST00000344204 CLEC1BQ9P126 229 aa11.69□□□□□ -0.54
TRIO-202ENST00000344204 TRAV8-4A0A0B4J246 113 aa11.69□□□□□ -0.54
TRIO-202ENST00000344204 DMRTA2Q96SC8 542 aa11.69□□□□□ -0.54
TRIO-202ENST00000344204 MPC1Q9Y5U8 109 aa11.69□□□□□ -0.54
TRIO-202ENST00000344204 TRAV5A0A0B4J249 113 aa11.69□□□□□ -0.54
TRIO-202ENST00000344204 UNC119Q13432 240 aa11.69□□□□□ -0.54
TRIO-202ENST00000344204 AICDAQ9GZX7 198 aa11.69□□□□□ -0.54
TRIO-202ENST00000344204 HIGD1CA8MV81 97 aa11.69□□□□□ -0.54
TRIO-202ENST00000344204 DMRTC2Q8IXT2 367 aaPredicted RBP11.69□□□□□ -0.54
TRIO-202ENST00000344204 A0A087X0K7 114 aa11.69□□□□□ -0.54
TRIO-202ENST00000344204 GABRG2P18507 467 aa11.69□□□□□ -0.54
TRIO-202ENST00000344204 ATP5LO75964 103 aa11.69□□□□□ -0.54
TRIO-202ENST00000344204 SCTP09683 121 aa11.69□□□□□ -0.54
TRIO-202ENST00000344204 AZU1P20160 251 aa11.69□□□□□ -0.54
TRIO-202ENST00000344204 ZAR1Q86SH2 424 aa11.69□□□□□ -0.54
TRIO-202ENST00000344204 OR4C13Q8NGP0 309 aa11.69□□□□□ -0.54
TRIO-202ENST00000344204 EGR1P18146 543 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms