RNA–Protein interactions for RNA: ENST00000343599.5

ZNF540-202, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ZNF540, Length 3,073 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-202ENST00000343599 FOXL2P58012 376 aa6.06□□□□□ -1.44
ZNF540-202ENST00000343599 LINC00310P59036 64 aa6.06□□□□□ -1.44
ZNF540-202ENST00000343599 RAET1LQ5VY80 246 aa6.06□□□□□ -1.44
ZNF540-202ENST00000343599 CST9LP1Q5W188 147 aa6.06□□□□□ -1.44
ZNF540-202ENST00000343599 TRAPPC6BQ86SZ2 158 aa6.06□□□□□ -1.44
ZNF540-202ENST00000343599 MSI2Q96DH6 328 aaKnown RBP6.06□□□□□ -1.44
ZNF540-202ENST00000343599 TIMD4Q96H15 378 aa6.06□□□□□ -1.44
ZNF540-202ENST00000343599 OR5B12Q96R08 314 aa6.06□□□□□ -1.44
ZNF540-202ENST00000343599 P2RX4Q99571 388 aa6.06□□□□□ -1.44
ZNF540-202ENST00000343599 HSPB9Q9BQS6 159 aa6.06□□□□□ -1.44
ZNF540-202ENST00000343599 MANBALQ9NQG1 85 aa6.06□□□□□ -1.44
ZNF540-202ENST00000343599 MRPL22Q9NWU5 206 aaKnown RBP6.06□□□□□ -1.44
ZNF540-202ENST00000343599 FRRS1LQ9P0K9 344 aa6.06□□□□□ -1.44
ZNF540-202ENST00000343599 H0Y8G0 127 aa6.05□□□□□ -1.44
ZNF540-202ENST00000343599 CDS2O95674 445 aa6.05□□□□□ -1.44
ZNF540-202ENST00000343599 MT-CO2P00403 227 aa6.05□□□□□ -1.44
ZNF540-202ENST00000343599 IGLC1P0CG04 106 aa6.05□□□□□ -1.44
ZNF540-202ENST00000343599 AZU1P20160 251 aa6.05□□□□□ -1.44
ZNF540-202ENST00000343599 SOX2P48431 317 aa6.05□□□□□ -1.44
ZNF540-202ENST00000343599 CKS1BP61024 79 aa6.05□□□□□ -1.44
ZNF540-202ENST00000343599 TRMT12Q53H54 448 aaKnown RBP6.05□□□□□ -1.44
ZNF540-202ENST00000343599 NEGR1Q7Z3B1 354 aa6.05□□□□□ -1.44
ZNF540-202ENST00000343599 FAM90A1Q86YD7 464 aa6.05□□□□□ -1.44
ZNF540-202ENST00000343599 TCTEX1D1Q8N7M0 179 aa6.05□□□□□ -1.44
ZNF540-202ENST00000343599 CHST4Q8NCG5 386 aa6.05□□□□□ -1.44
ZNF540-202ENST00000343599 OR2T10Q8NGZ9 312 aa6.05□□□□□ -1.44
ZNF540-202ENST00000343599 RAB1CQ92928 201 aa6.05□□□□□ -1.44
ZNF540-202ENST00000343599 SLC35G5Q96KT7 338 aa6.05□□□□□ -1.44
ZNF540-202ENST00000343599 FOXN4Q96NZ1 517 aa6.05□□□□□ -1.44
ZNF540-202ENST00000343599 FAM110AQ9BQ89 295 aa6.05□□□□□ -1.44
ZNF540-202ENST00000343599 PRSS27Q9BQR3 290 aa6.05□□□□□ -1.44
ZNF540-202ENST00000343599 SRXN1Q9BYN0 137 aa6.05□□□□□ -1.44
ZNF540-202ENST00000343599 ZNF665Q9H7R5 613 aa6.05□□□□□ -1.44
ZNF540-202ENST00000343599 AK3Q9UIJ7 227 aa6.05□□□□□ -1.44
ZNF540-202ENST00000343599 ANAPC10Q9UM13 185 aa6.05□□□□□ -1.44
ZNF540-202ENST00000343599 OR51B2Q9Y5P1 312 aa6.05□□□□□ -1.44
ZNF540-202ENST00000343599 FASNP49327 2511 aaKnown RBP6.05□□□□□ -1.44
ZNF540-202ENST00000343599 ZGRF1Q86YA3 2104 aa6.05□□□□□ -1.44
ZNF540-202ENST00000343599 DSCAMO60469 2012 aa6.05□□□□□ -1.44
ZNF540-202ENST00000343599 PRR32B1ATL7 298 aa6.05□□□□□ -1.44
ZNF540-202ENST00000343599 KLK1P06870 262 aa6.05□□□□□ -1.44
ZNF540-202ENST00000343599 SMIM17P0DL12 118 aa6.05□□□□□ -1.44
ZNF540-202ENST00000343599 BAXQ07812 192 aa6.05□□□□□ -1.44
ZNF540-202ENST00000343599 IAH1Q2TAA2 248 aaPredicted RBP6.05□□□□□ -1.44
ZNF540-202ENST00000343599 VAX1Q5SQQ9 334 aa6.05□□□□□ -1.44
ZNF540-202ENST00000343599 AMMECR1LQ6DCA0 310 aa6.05□□□□□ -1.44
ZNF540-202ENST00000343599 WDR82Q6UXN9 313 aa6.05□□□□□ -1.44
ZNF540-202ENST00000343599 LINC00482Q8N8I6 264 aa6.05□□□□□ -1.44
ZNF540-202ENST00000343599 C5orf17Q8NAS9 161 aa6.05□□□□□ -1.44
ZNF540-202ENST00000343599 OR5AU1Q8NGC0 362 aa6.05□□□□□ -1.44
ZNF540-202ENST00000343599 SCGB3A2Q96PL1 93 aa6.05□□□□□ -1.44
ZNF540-202ENST00000343599 ADOQ96SZ5 270 aa6.05□□□□□ -1.44
ZNF540-202ENST00000343599 SDF2Q99470 211 aa6.05□□□□□ -1.44
ZNF540-202ENST00000343599 PRR13Q9NZ81 148 aa6.05□□□□□ -1.44
ZNF540-202ENST00000343599 TP53TG3Q9ULZ0 132 aa6.05□□□□□ -1.44
ZNF540-202ENST00000343599 RCL1Q9Y2P8 373 aaKnown RBP6.05□□□□□ -1.44
ZNF540-202ENST00000343599 ODAMA1E959 279 aa6.05□□□□□ -1.44
ZNF540-202ENST00000343599 MPZL1O95297 269 aa6.05□□□□□ -1.44
ZNF540-202ENST00000343599 HSPB3Q12988 150 aa6.05□□□□□ -1.44
ZNF540-202ENST00000343599 CR1LQ2VPA4 569 aa6.05□□□□□ -1.44
ZNF540-202ENST00000343599 SAMD5Q5TGI4 173 aa6.05□□□□□ -1.44
ZNF540-202ENST00000343599 Q6YL49 198 aa6.05□□□□□ -1.44
ZNF540-202ENST00000343599 OLIG3Q7RTU3 272 aa6.05□□□□□ -1.44
ZNF540-202ENST00000343599 HMGN2P46Q86SG4 172 aa6.05□□□□□ -1.44
ZNF540-202ENST00000343599 HIST2H2ABQ8IUE6 130 aaPredicted RBP6.05□□□□□ -1.44
ZNF540-202ENST00000343599 DEFB125Q8N687 156 aa6.05□□□□□ -1.44
ZNF540-202ENST00000343599 OR2G3Q8NGZ4 309 aa6.05□□□□□ -1.44
ZNF540-202ENST00000343599 FNDC9Q8TBE3 224 aa6.05□□□□□ -1.44
ZNF540-202ENST00000343599 BTF3L4Q96K17 158 aa6.05□□□□□ -1.44
ZNF540-202ENST00000343599 SIGMAR1Q99720 223 aa6.05□□□□□ -1.44
ZNF540-202ENST00000343599 PRRG4Q9BZD6 226 aa6.05□□□□□ -1.44
ZNF540-202ENST00000343599 HEYLQ9NQ87 328 aaPredicted RBP6.05□□□□□ -1.44
ZNF540-202ENST00000343599 PPP1R3CQ9UQK1 317 aa6.05□□□□□ -1.44
ZNF540-202ENST00000343599 CREBBPQ92793 2442 aa6.05□□□□□ -1.44
ZNF540-202ENST00000343599 PCBD1P61457 104 aa6.04□□□□□ -1.44
ZNF540-202ENST00000343599 BEAN1Q3B7T3 259 aa6.04□□□□□ -1.44
ZNF540-202ENST00000343599 UFSP1Q6NVU6 142 aa6.04□□□□□ -1.44
ZNF540-202ENST00000343599 CYP2G1PQ6ZSU1 146 aa6.04□□□□□ -1.44
ZNF540-202ENST00000343599 SLC16A9Q7RTY1 509 aa6.04□□□□□ -1.44
ZNF540-202ENST00000343599 MTURNQ8N3F0 131 aa6.04□□□□□ -1.44
ZNF540-202ENST00000343599 GVQW1Q8N7I0 195 aa6.04□□□□□ -1.44
ZNF540-202ENST00000343599 SFRP2Q96HF1 295 aa6.04□□□□□ -1.44
ZNF540-202ENST00000343599 MCHR1Q99705 422 aa6.04□□□□□ -1.44
ZNF540-202ENST00000343599 RSG1Q9BU20 258 aa6.04□□□□□ -1.44
ZNF540-202ENST00000343599 ABCA2Q9BZC7 2435 aa6.04□□□□□ -1.44
ZNF540-202ENST00000343599 TMEM212A6NML5 194 aa6.04□□□□□ -1.44
ZNF540-202ENST00000343599 DIRC3C9JPN6 131 aa6.04□□□□□ -1.44
ZNF540-202ENST00000343599 C3orf84H3BNL1 204 aa6.04□□□□□ -1.44
ZNF540-202ENST00000343599 MRPL33O75394 65 aaKnown RBP6.04□□□□□ -1.44
ZNF540-202ENST00000343599 IGKV1D-16P01601 117 aa6.04□□□□□ -1.44
ZNF540-202ENST00000343599 SGCBQ16585 318 aa6.04□□□□□ -1.44
ZNF540-202ENST00000343599 ATG4DQ86TL0 474 aaPredicted RBP6.04□□□□□ -1.44
ZNF540-202ENST00000343599 CCDC71LQ8N9Z2 235 aa6.04□□□□□ -1.44
ZNF540-202ENST00000343599 WFDC9Q8NEX5 89 aa6.04□□□□□ -1.44
ZNF540-202ENST00000343599 ZG16BQ96DA0 208 aa6.04□□□□□ -1.44
ZNF540-202ENST00000343599 C20orf141Q9NUB4 165 aa6.04□□□□□ -1.44
ZNF540-202ENST00000343599 PLEKHJ1Q9NW61 149 aa6.04□□□□□ -1.44
ZNF540-202ENST00000343599 C1orf123Q9NWV4 160 aa6.04□□□□□ -1.44
ZNF540-202ENST00000343599 VDAC3Q9Y277 283 aa6.04□□□□□ -1.44
ZNF540-202ENST00000343599 OR2T8A6NH00 312 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms