RNA–Protein interactions for RNA: ENST00000343060.4

HOXA1-201, Transcript of homeobox A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-201ENST00000343060 LOC105371242A0A075B767 164 aa8.03□□□□□ -1.12
HOXA1-201ENST00000343060 NXPH2O95156 264 aa8.03□□□□□ -1.12
HOXA1-201ENST00000343060 SPINK2P20155 84 aa8.03□□□□□ -1.12
HOXA1-201ENST00000343060 VDAC2P45880 294 aaPredicted RBP8.03□□□□□ -1.12
HOXA1-201ENST00000343060 FOXG1P55316 489 aaPredicted RBP8.03□□□□□ -1.12
HOXA1-201ENST00000343060 RPP30P78346 268 aaKnown RBP8.03□□□□□ -1.12
HOXA1-201ENST00000343060 SPINK9Q5DT21 86 aa8.03□□□□□ -1.12
HOXA1-201ENST00000343060 MIC13Q5XKP0 118 aa8.03□□□□□ -1.12
HOXA1-201ENST00000343060 OR8I2Q8N0Y5 310 aa8.03□□□□□ -1.12
HOXA1-201ENST00000343060 OR52E5Q8NH55 327 aa8.03□□□□□ -1.12
HOXA1-201ENST00000343060 C1orf159Q96HA4 380 aa8.03□□□□□ -1.12
HOXA1-201ENST00000343060 UHRF2Q96PU4 802 aa8.03□□□□□ -1.12
HOXA1-201ENST00000343060 GSX1Q9H4S2 264 aaPredicted RBP8.03□□□□□ -1.12
HOXA1-201ENST00000343060 GP6Q9HCN6 339 aa8.03□□□□□ -1.12
HOXA1-201ENST00000343060 OCIAD1Q9NX40 245 aa8.03□□□□□ -1.12
HOXA1-201ENST00000343060 MRPL27Q9P0M9 148 aaKnown RBP8.03□□□□□ -1.12
HOXA1-201ENST00000343060 NAT8BQ9UHF3 227 aa8.03□□□□□ -1.12
HOXA1-201ENST00000343060 CDC42EP3Q9UKI2 254 aa8.03□□□□□ -1.12
HOXA1-201ENST00000343060 IGHV2OR16-5A0A0B4J2B6 119 aa8.03□□□□□ -1.12
HOXA1-201ENST00000343060 IGHV2-70DA0A0C4DH43 119 aa8.03□□□□□ -1.12
HOXA1-201ENST00000343060 DPRXA6NFQ7 191 aa8.03□□□□□ -1.12
HOXA1-201ENST00000343060 BMPR1BO00238 502 aa8.03□□□□□ -1.12
HOXA1-201ENST00000343060 AQP7O14520 342 aa8.03□□□□□ -1.12
HOXA1-201ENST00000343060 MT-CO2P00403 227 aa8.03□□□□□ -1.12
HOXA1-201ENST00000343060 CA2P00918 260 aa8.03□□□□□ -1.12
HOXA1-201ENST00000343060 HLA-DQA1P01909 254 aa8.03□□□□□ -1.12
HOXA1-201ENST00000343060 CA6P23280 308 aa8.03□□□□□ -1.12
HOXA1-201ENST00000343060 HTD2P86397 168 aa8.03□□□□□ -1.12
HOXA1-201ENST00000343060 SLC35E4Q6ICL7 350 aa8.03□□□□□ -1.12
HOXA1-201ENST00000343060 TMPRSS7Q7RTY8 843 aa8.03□□□□□ -1.12
HOXA1-201ENST00000343060 PNKDQ8N490 385 aa8.03□□□□□ -1.12
HOXA1-201ENST00000343060 SCCPDHQ8NBX0 429 aa8.03□□□□□ -1.12
HOXA1-201ENST00000343060 ZNF738Q8NE65 137 aa8.03□□□□□ -1.12
HOXA1-201ENST00000343060 OR4P4Q8NGL7 312 aa8.03□□□□□ -1.12
HOXA1-201ENST00000343060 HSD17B10Q99714 261 aaKnown RBP8.03□□□□□ -1.12
HOXA1-201ENST00000343060 MS4A5Q9H3V2 200 aa8.03□□□□□ -1.12
HOXA1-201ENST00000343060 FREM1Q5H8C1 2179 aa8.02□□□□□ -1.12
HOXA1-201ENST00000343060 IGHV1-69-2A0A0G2JMI3 117 aa8.02□□□□□ -1.12
HOXA1-201ENST00000343060 A0A1W2PN81 502 aa8.02□□□□□ -1.12
HOXA1-201ENST00000343060 OOEPA6NGQ2 149 aa8.02□□□□□ -1.12
HOXA1-201ENST00000343060 LINC00473A8K010 186 aa8.02□□□□□ -1.12
HOXA1-201ENST00000343060 AMY1AP04745 511 aa8.02□□□□□ -1.12
HOXA1-201ENST00000343060 OR9G9P0C7N8 305 aa8.02□□□□□ -1.12
HOXA1-201ENST00000343060 PMCHP20382 165 aa8.02□□□□□ -1.12
HOXA1-201ENST00000343060 PMCHL1Q16048 86 aa8.02□□□□□ -1.12
HOXA1-201ENST00000343060 C9orf135Q5VTT2 229 aa8.02□□□□□ -1.12
HOXA1-201ENST00000343060 MCEMP1Q8IX19 187 aa8.02□□□□□ -1.12
HOXA1-201ENST00000343060 OR52L2PQ8NGH6 319 aa8.02□□□□□ -1.12
HOXA1-201ENST00000343060 SLC35D1Q9NTN3 355 aa8.02□□□□□ -1.12
HOXA1-201ENST00000343060 DIDO1Q9BTC0 2240 aaKnown RBP8.02□□□□□ -1.13
HOXA1-201ENST00000343060 HBZP02008 142 aa8.02□□□□□ -1.13
HOXA1-201ENST00000343060 PLP2Q04941 152 aa8.02□□□□□ -1.13
HOXA1-201ENST00000343060 IL11RAQ14626 422 aa8.02□□□□□ -1.13
HOXA1-201ENST00000343060 EFNB3Q15768 340 aa8.02□□□□□ -1.13
HOXA1-201ENST00000343060 ZNF766Q5HY98 468 aa8.02□□□□□ -1.13
HOXA1-201ENST00000343060 TIPARPQ7Z3E1 657 aaKnown RBP8.02□□□□□ -1.13
HOXA1-201ENST00000343060 OR2Y1Q8NGV0 311 aa8.02□□□□□ -1.13
HOXA1-201ENST00000343060 TSKUQ8WUA8 353 aa8.02□□□□□ -1.13
HOXA1-201ENST00000343060 DEPPQ9NTK1 212 aa8.02□□□□□ -1.13
HOXA1-201ENST00000343060 BET1LQ9NYM9 111 aa8.02□□□□□ -1.13
HOXA1-201ENST00000343060 SLC25A10Q9UBX3 287 aaPredicted RBP8.02□□□□□ -1.13
HOXA1-201ENST00000343060 SMIM27A0A1W2PRY6 76 aa8.01□□□□□ -1.13
HOXA1-201ENST00000343060 ZNF891A8MT65 544 aaPredicted RBP8.01□□□□□ -1.13
HOXA1-201ENST00000343060 J3QW42 95 aa8.01□□□□□ -1.13
HOXA1-201ENST00000343060 ISLRO14498 428 aa8.01□□□□□ -1.13
HOXA1-201ENST00000343060 RBMXL2O75526 392 aaKnown RBP8.01□□□□□ -1.13
HOXA1-201ENST00000343060 HAND1O96004 215 aa8.01□□□□□ -1.13
HOXA1-201ENST00000343060 PPBPP02775 128 aa8.01□□□□□ -1.13
HOXA1-201ENST00000343060 RPS20P60866 119 aaKnown RBP8.01□□□□□ -1.13
HOXA1-201ENST00000343060 OR1C1Q15619 314 aa8.01□□□□□ -1.13
HOXA1-201ENST00000343060 CENPWQ5EE01 88 aa8.01□□□□□ -1.13
HOXA1-201ENST00000343060 FAM53AQ6NSI3 398 aaPredicted RBP8.01□□□□□ -1.13
HOXA1-201ENST00000343060 UNQ5815/PRO19632Q6UWF5 114 aa8.01□□□□□ -1.13
HOXA1-201ENST00000343060 LYG1Q8N1E2 194 aa8.01□□□□□ -1.13
HOXA1-201ENST00000343060 OR4F17Q8NGA8 305 aa8.01□□□□□ -1.13
HOXA1-201ENST00000343060 MRGPRDQ8TDS7 321 aa8.01□□□□□ -1.13
HOXA1-201ENST00000343060 ALKBH7Q9BT30 221 aaPredicted RBP8.01□□□□□ -1.13
HOXA1-201ENST00000343060 DUSP23Q9BVJ7 150 aa8.01□□□□□ -1.13
HOXA1-201ENST00000343060 LAMA1P25391 3075 aa8.01□□□□□ -1.13
HOXA1-201ENST00000343060 BRWD1Q9NSI6 2320 aa8.01□□□□□ -1.13
HOXA1-201ENST00000343060 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.01□□□□□ -1.13
HOXA1-201ENST00000343060 IGLC7A0M8Q6 106 aa8.01□□□□□ -1.13
HOXA1-201ENST00000343060 PSPNO60542 156 aa8.01□□□□□ -1.13
HOXA1-201ENST00000343060 GFRA3O60609 400 aa8.01□□□□□ -1.13
HOXA1-201ENST00000343060 MT-CO3P00414 261 aa8.01□□□□□ -1.13
HOXA1-201ENST00000343060 SRIP30626 198 aa8.01□□□□□ -1.13
HOXA1-201ENST00000343060 SPATA31B1PQ5VZV4 182 aa8.01□□□□□ -1.13
HOXA1-201ENST00000343060 ZNF784Q8NCA9 323 aaPredicted RBP8.01□□□□□ -1.13
HOXA1-201ENST00000343060 WIPF2Q8TF74 440 aaPredicted RBP8.01□□□□□ -1.13
HOXA1-201ENST00000343060 SPEGQ15772 3267 aa8.01□□□□□ -1.13
HOXA1-201ENST00000343060 TRGV8A0A0C4DH27 118 aa8□□□□□ -1.13
HOXA1-201ENST00000343060 SP1P08047 785 aa8□□□□□ -1.13
HOXA1-201ENST00000343060 SRFP11831 508 aa8□□□□□ -1.13
HOXA1-201ENST00000343060 GNG4P50150 75 aa8□□□□□ -1.13
HOXA1-201ENST00000343060 SELENOVP59797 346 aa8□□□□□ -1.13
HOXA1-201ENST00000343060 SSPNQ14714 243 aa8□□□□□ -1.13
HOXA1-201ENST00000343060 TBR1Q16650 682 aa8□□□□□ -1.13
HOXA1-201ENST00000343060 STUMQ69YW2 141 aa8□□□□□ -1.13
HOXA1-201ENST00000343060 RASL11AQ6T310 242 aa8□□□□□ -1.13
HOXA1-201ENST00000343060 TUSC5Q8IXB3 177 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms