RNA–Protein interactions for RNA: ENST00000342310.7

LMX1A-202, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,545 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-202ENST00000342310 BTF3L4Q96K17 158 aa10.49□□□□□ -0.73
LMX1A-202ENST00000342310 NPCDR1Q9BY65 106 aa10.49□□□□□ -0.73
LMX1A-202ENST00000342310 AKAP13Q12802 2813 aa10.49□□□□□ -0.73
LMX1A-202ENST00000342310 OR4A8P0C604 315 aa10.49□□□□□ -0.73
LMX1A-202ENST00000342310 CD59P13987 128 aa10.49□□□□□ -0.73
LMX1A-202ENST00000342310 PMCHP20382 165 aa10.49□□□□□ -0.73
LMX1A-202ENST00000342310 FAM27E3Q08E93 113 aa10.49□□□□□ -0.73
LMX1A-202ENST00000342310 SPRNQ5BIV9 151 aa10.49□□□□□ -0.73
LMX1A-202ENST00000342310 VN1R17PQ8TDU5 208 aa10.49□□□□□ -0.73
LMX1A-202ENST00000342310 TMEM18Q96B42 140 aa10.49□□□□□ -0.73
LMX1A-202ENST00000342310 COQ2Q96H96 371 aa10.49□□□□□ -0.73
LMX1A-202ENST00000342310 SDF2L1Q9HCN8 221 aa10.49□□□□□ -0.73
LMX1A-202ENST00000342310 PTPN13Q12923 2485 aa10.48□□□□□ -0.73
LMX1A-202ENST00000342310 C21orf140B9A014 251 aa10.48□□□□□ -0.73
LMX1A-202ENST00000342310 PPIHO43447 177 aaKnown RBP10.48□□□□□ -0.73
LMX1A-202ENST00000342310 DPPA3Q6W0C5 159 aa10.48□□□□□ -0.73
LMX1A-202ENST00000342310 PPP1R35Q8TAP8 253 aa10.48□□□□□ -0.73
LMX1A-202ENST00000342310 IGKV3D-15A0A087WSY6 115 aa10.48□□□□□ -0.73
LMX1A-202ENST00000342310 CTXND1A0A1B0GTU2 59 aa10.48□□□□□ -0.73
LMX1A-202ENST00000342310 KLK10O43240 276 aa10.48□□□□□ -0.73
LMX1A-202ENST00000342310 OR5G3P0C626 314 aa10.48□□□□□ -0.73
LMX1A-202ENST00000342310 RPL23P62829 140 aaKnown RBP10.48□□□□□ -0.73
LMX1A-202ENST00000342310 GNB1P62873 340 aa10.48□□□□□ -0.73
LMX1A-202ENST00000342310 MRPL54Q6P161 138 aaKnown RBP10.48□□□□□ -0.73
LMX1A-202ENST00000342310 KCNIP4Q6PIL6 250 aa10.48□□□□□ -0.73
LMX1A-202ENST00000342310 WDR82Q6UXN9 313 aa10.48□□□□□ -0.73
LMX1A-202ENST00000342310 C1QL4Q86Z23 238 aa10.48□□□□□ -0.73
LMX1A-202ENST00000342310 TGIF2LYQ8IUE0 185 aa10.48□□□□□ -0.73
LMX1A-202ENST00000342310 ATOH7Q8N100 152 aa10.48□□□□□ -0.73
LMX1A-202ENST00000342310 FAM216BQ8N7L0 139 aa10.48□□□□□ -0.73
LMX1A-202ENST00000342310 OR8G5Q8NG78 346 aa10.48□□□□□ -0.73
LMX1A-202ENST00000342310 SARAFQ96BY9 339 aa10.48□□□□□ -0.73
LMX1A-202ENST00000342310 GMPPAQ96IJ6 420 aaPredicted RBP10.48□□□□□ -0.73
LMX1A-202ENST00000342310 DDA1Q9BW61 102 aa10.48□□□□□ -0.73
LMX1A-202ENST00000342310 LINC00470Q9BZP3 86 aa10.48□□□□□ -0.73
LMX1A-202ENST00000342310 CXXC4Q9H2H0 198 aa10.48□□□□□ -0.73
LMX1A-202ENST00000342310 WIPI2Q9Y4P8 454 aa10.48□□□□□ -0.73
LMX1A-202ENST00000342310 SLC31A2O15432 143 aa10.47□□□□□ -0.73
LMX1A-202ENST00000342310 REG1AP05451 166 aa10.47□□□□□ -0.73
LMX1A-202ENST00000342310 HOXB1P14653 301 aaPredicted RBP10.47□□□□□ -0.73
LMX1A-202ENST00000342310 CBLN1P23435 193 aa10.47□□□□□ -0.73
LMX1A-202ENST00000342310 TNFSF10P50591 281 aa10.47□□□□□ -0.73
LMX1A-202ENST00000342310 CD81P60033 236 aa10.47□□□□□ -0.73
LMX1A-202ENST00000342310 PAX5Q02548 391 aa10.47□□□□□ -0.73
LMX1A-202ENST00000342310 PSG5Q15238 335 aa10.47□□□□□ -0.73
LMX1A-202ENST00000342310 SPATA31B1PQ5VZV4 182 aa10.47□□□□□ -0.73
LMX1A-202ENST00000342310 MOB1BQ7L9L4 216 aa10.47□□□□□ -0.73
LMX1A-202ENST00000342310 OR1P1Q8NH06 330 aa10.47□□□□□ -0.73
LMX1A-202ENST00000342310 TBX15Q96SF7 602 aa10.47□□□□□ -0.73
LMX1A-202ENST00000342310 SCRT1Q9BWW7 348 aa10.47□□□□□ -0.73
LMX1A-202ENST00000342310 PARD6AQ9NPB6 346 aa10.47□□□□□ -0.73
LMX1A-202ENST00000342310 RYDENQ9NUL5 291 aaKnown RBP10.47□□□□□ -0.73
LMX1A-202ENST00000342310 SELENOKQ9Y6D0 94 aa10.47□□□□□ -0.73
LMX1A-202ENST00000342310 FAM90A10PA6NDY2 464 aa10.47□□□□□ -0.73
LMX1A-202ENST00000342310 FAM90A18PA6NE21 464 aa10.47□□□□□ -0.73
LMX1A-202ENST00000342310 FAM90A16PA6NEW6 464 aa10.47□□□□□ -0.73
LMX1A-202ENST00000342310 FAM90A20PA6NIJ5 464 aa10.47□□□□□ -0.73
LMX1A-202ENST00000342310 FAM90A8PA6NJQ4 464 aa10.47□□□□□ -0.73
LMX1A-202ENST00000342310 FAM90A7PA6NKC0 464 aa10.47□□□□□ -0.73
LMX1A-202ENST00000342310 FAM90A22PA8MWA6 464 aa10.47□□□□□ -0.73
LMX1A-202ENST00000342310 FAM90A12PA8MX19 464 aa10.47□□□□□ -0.73
LMX1A-202ENST00000342310 FAM90A5PA8MXJ8 464 aa10.47□□□□□ -0.73
LMX1A-202ENST00000342310 FAM90A23PA8MXZ1 464 aa10.47□□□□□ -0.73
LMX1A-202ENST00000342310 CDX4O14627 284 aaPredicted RBP10.47□□□□□ -0.73
LMX1A-202ENST00000342310 FAM90A15PP0C7V4 464 aa10.47□□□□□ -0.73
LMX1A-202ENST00000342310 FAM90A13PP0C7W8 464 aa10.47□□□□□ -0.73
LMX1A-202ENST00000342310 FAM90A14PP0C7W9 464 aa10.47□□□□□ -0.73
LMX1A-202ENST00000342310 FAM90A24PP0C7X0 464 aa10.47□□□□□ -0.73
LMX1A-202ENST00000342310 TFPI2P48307 235 aa10.47□□□□□ -0.73
LMX1A-202ENST00000342310 PITPNC1Q9UKF7 332 aa10.47□□□□□ -0.73
LMX1A-202ENST00000342310 PXMP4Q9Y6I8 212 aa10.47□□□□□ -0.73
LMX1A-202ENST00000342310 ARHGAP32A7KAX9 2087 aa10.47□□□□□ -0.73
LMX1A-202ENST00000342310 SCO2A0A1W2PP80 73 aa10.47□□□□□ -0.73
LMX1A-202ENST00000342310 EREGO14944 169 aa10.47□□□□□ -0.73
LMX1A-202ENST00000342310 TGOLN2O43493 480 aa10.47□□□□□ -0.73
LMX1A-202ENST00000342310 AMBPP02760 352 aa10.47□□□□□ -0.73
LMX1A-202ENST00000342310 IER3P46695 156 aa10.47□□□□□ -0.73
LMX1A-202ENST00000342310 SERF2P84101 59 aa10.47□□□□□ -0.73
LMX1A-202ENST00000342310 ACP7Q6ZNF0 438 aa10.47□□□□□ -0.73
LMX1A-202ENST00000342310 ST6GALNAC3Q8NDV1 305 aa10.47□□□□□ -0.73
LMX1A-202ENST00000342310 PKIBQ9C010 78 aa10.47□□□□□ -0.73
LMX1A-202ENST00000342310 LOC102724200A0A096LPH7 203 aaPredicted RBP10.46□□□□□ -0.73
LMX1A-202ENST00000342310 MRPS11P82912 194 aaKnown RBP10.46□□□□□ -0.73
LMX1A-202ENST00000342310 REC114Q7Z4M0 266 aa10.46□□□□□ -0.73
LMX1A-202ENST00000342310 ZNF664Q8N3J9 261 aa10.46□□□□□ -0.73
LMX1A-202ENST00000342310 PRDM13Q9H4Q3 707 aa10.46□□□□□ -0.73
LMX1A-202ENST00000342310 FKBP11Q9NYL4 201 aa10.46□□□□□ -0.73
LMX1A-202ENST00000342310 MBP02144 154 aa10.46□□□□□ -0.73
LMX1A-202ENST00000342310 RAB31Q13636 194 aa10.46□□□□□ -0.73
LMX1A-202ENST00000342310 GABRA6Q16445 453 aa10.46□□□□□ -0.73
LMX1A-202ENST00000342310 DOLPP1Q86YN1 238 aa10.46□□□□□ -0.73
LMX1A-202ENST00000342310 SAXO1Q8IYX7 474 aa10.46□□□□□ -0.73
LMX1A-202ENST00000342310 TMEM256Q8N2U0 113 aa10.46□□□□□ -0.73
LMX1A-202ENST00000342310 BLNKQ8WV28 456 aa10.46□□□□□ -0.73
LMX1A-202ENST00000342310 MS4A5Q9H3V2 200 aa10.46□□□□□ -0.73
LMX1A-202ENST00000342310 TMEM140Q9NV12 185 aa10.46□□□□□ -0.73
LMX1A-202ENST00000342310 CISD1Q9NZ45 108 aaKnown RBP10.46□□□□□ -0.73
LMX1A-202ENST00000342310 PPIAL4AQ9Y536 164 aa10.46□□□□□ -0.73
LMX1A-202ENST00000342310 WT1P19544 449 aaPredicted RBP10.46□□□□□ -0.74
LMX1A-202ENST00000342310 GNB2P62879 340 aa10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms