RNA–Protein interactions for RNA: ENST00000341753.10

TRIM28-202, Transcript of tripartite motif containing 28, humanhuman

TSL 1 (best) BASIC

Gene TRIM28, Length 2,709 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-202ENST00000341753 K7EN84 100 aa18.61■□□□□ 0.57
TRIM28-202ENST00000341753 IGHV3-13P01766 116 aa18.61■□□□□ 0.57
TRIM28-202ENST00000341753 IGHV3-7P01780 117 aa18.61■□□□□ 0.57
TRIM28-202ENST00000341753 TFPI2P48307 235 aa18.61■□□□□ 0.57
TRIM28-202ENST00000341753 PSG7Q13046 419 aa18.61■□□□□ 0.57
TRIM28-202ENST00000341753 BAGE3Q86Y29 109 aa18.61■□□□□ 0.57
TRIM28-202ENST00000341753 BAGE2Q86Y30 109 aa18.61■□□□□ 0.57
TRIM28-202ENST00000341753 ZPBPQ9BS86 351 aa18.61■□□□□ 0.57
TRIM28-202ENST00000341753 DMXL1Q9Y485 3027 aa18.61■□□□□ 0.57
TRIM28-202ENST00000341753 M0R296 226 aa18.61■□□□□ 0.57
TRIM28-202ENST00000341753 IER3P46695 156 aa18.61■□□□□ 0.57
TRIM28-202ENST00000341753 UBE2NP61088 152 aaKnown RBP18.61■□□□□ 0.57
TRIM28-202ENST00000341753 YPEL3P61236 119 aaPredicted RBP18.61■□□□□ 0.57
TRIM28-202ENST00000341753 C21orf62-AS1Q17RA5 79 aa18.61■□□□□ 0.57
TRIM28-202ENST00000341753 KRTCAP3Q53RY4 240 aa18.61■□□□□ 0.57
TRIM28-202ENST00000341753 PCNX2A6NKB5 2137 aa18.6■□□□□ 0.57
TRIM28-202ENST00000341753 SPATA31B1PQ5VZV4 182 aa18.6■□□□□ 0.57
TRIM28-202ENST00000341753 Q8IYB0 196 aa18.6■□□□□ 0.57
TRIM28-202ENST00000341753 MIEN1Q9BRT3 115 aa18.6■□□□□ 0.57
TRIM28-202ENST00000341753 SAMD10Q9BYL1 202 aa18.6■□□□□ 0.57
TRIM28-202ENST00000341753 DEFB127Q9H1M4 99 aa18.6■□□□□ 0.57
TRIM28-202ENST00000341753 METRNQ9UJH8 293 aa18.6■□□□□ 0.57
TRIM28-202ENST00000341753 TNFSF13O75888 250 aa18.6■□□□□ 0.57
TRIM28-202ENST00000341753 TNFSF15O95150 251 aa18.6■□□□□ 0.57
TRIM28-202ENST00000341753 PDLIM3Q53GG5 364 aaPredicted RBP18.6■□□□□ 0.57
TRIM28-202ENST00000341753 TREML4Q6UXN2 200 aa18.6■□□□□ 0.57
TRIM28-202ENST00000341753 ZBTB34Q8NCN2 500 aa18.6■□□□□ 0.57
TRIM28-202ENST00000341753 OR1L6Q8NGR2 347 aa18.6■□□□□ 0.57
TRIM28-202ENST00000341753 COQ2Q96H96 371 aa18.6■□□□□ 0.57
TRIM28-202ENST00000341753 MGST2Q99735 147 aa18.6■□□□□ 0.57
TRIM28-202ENST00000341753 MS4A5Q9H3V2 200 aa18.6■□□□□ 0.57
TRIM28-202ENST00000341753 GP6Q9HCN6 339 aa18.6■□□□□ 0.57
TRIM28-202ENST00000341753 CACNA1HO95180 2353 aa18.6■□□□□ 0.57
TRIM28-202ENST00000341753 TRIP6Q15654 476 aaKnown RBP18.59■□□□□ 0.57
TRIM28-202ENST00000341753 TMEM164Q5U3C3 297 aa18.59■□□□□ 0.57
TRIM28-202ENST00000341753 TEX43Q6ZNM6 134 aa18.59■□□□□ 0.57
TRIM28-202ENST00000341753 VAMP8Q9BV40 100 aa18.59■□□□□ 0.57
TRIM28-202ENST00000341753 FCN1O00602 326 aa18.59■□□□□ 0.57
TRIM28-202ENST00000341753 OR5I1Q13606 314 aa18.59■□□□□ 0.57
TRIM28-202ENST00000341753 B4GALT7Q9UBV7 327 aa18.59■□□□□ 0.57
TRIM28-202ENST00000341753 BRS3P32247 399 aa18.58■□□□□ 0.57
TRIM28-202ENST00000341753 ARSJQ5FYB0 599 aaPredicted RBP18.58■□□□□ 0.57
TRIM28-202ENST00000341753 ABHD12Q8N2K0 398 aa18.58■□□□□ 0.57
TRIM28-202ENST00000341753 LPAR2Q9HBW0 351 aa18.58■□□□□ 0.57
TRIM28-202ENST00000341753 PPIAL4AQ9Y536 164 aa18.58■□□□□ 0.57
TRIM28-202ENST00000341753 FCGR3BO75015 233 aa18.58■□□□□ 0.56
TRIM28-202ENST00000341753 MEOX1P50221 254 aa18.58■□□□□ 0.56
TRIM28-202ENST00000341753 RPL31P62899 125 aaKnown RBP18.58■□□□□ 0.56
TRIM28-202ENST00000341753 OR5AU1Q8NGC0 362 aa18.58■□□□□ 0.56
TRIM28-202ENST00000341753 OR13A1Q8NGR1 328 aa18.58■□□□□ 0.56
TRIM28-202ENST00000341753 BTF3L4Q96K17 158 aa18.58■□□□□ 0.56
TRIM28-202ENST00000341753 TAAR6Q96RI8 345 aa18.58■□□□□ 0.56
TRIM28-202ENST00000341753 HEYLQ9NQ87 328 aaPredicted RBP18.58■□□□□ 0.56
TRIM28-202ENST00000341753 OOEPA6NGQ2 149 aa18.58■□□□□ 0.56
TRIM28-202ENST00000341753 FOXH1O75593 365 aa18.58■□□□□ 0.56
TRIM28-202ENST00000341753 ZNF883P0CG24 379 aa18.58■□□□□ 0.56
TRIM28-202ENST00000341753 KRTDAPP60985 99 aa18.58■□□□□ 0.56
TRIM28-202ENST00000341753 HES3Q5TGS1 186 aa18.58■□□□□ 0.56
TRIM28-202ENST00000341753 SLC25A40Q8TBP6 338 aa18.58■□□□□ 0.56
TRIM28-202ENST00000341753 OBP2BQ9NPH6 170 aa18.58■□□□□ 0.56
TRIM28-202ENST00000341753 SELENOTP62341 195 aa18.57■□□□□ 0.56
TRIM28-202ENST00000341753 SLC35B1P78383 322 aa18.57■□□□□ 0.56
TRIM28-202ENST00000341753 TMEM183BQ1AE95 376 aa18.57■□□□□ 0.56
TRIM28-202ENST00000341753 C20orf144Q9BQM9 153 aa18.57■□□□□ 0.56
TRIM28-202ENST00000341753 GGTLC1Q9BX51 225 aa18.57■□□□□ 0.56
TRIM28-202ENST00000341753 SNURFLB1AK76 121 aa18.57■□□□□ 0.56
TRIM28-202ENST00000341753 M0QZK8 103 aa18.57■□□□□ 0.56
TRIM28-202ENST00000341753 SMPD2O60906 423 aa18.57■□□□□ 0.56
TRIM28-202ENST00000341753 STAG3L2P0CL84 134 aa18.57■□□□□ 0.56
TRIM28-202ENST00000341753 STAG3L3P0CL85 134 aa18.57■□□□□ 0.56
TRIM28-202ENST00000341753 BCL2L2Q92843 193 aaPredicted RBP18.57■□□□□ 0.56
TRIM28-202ENST00000341753 RAB1CQ92928 201 aa18.57■□□□□ 0.56
TRIM28-202ENST00000341753 SEPSECSQ9HD40 501 aaKnown RBP18.57■□□□□ 0.56
TRIM28-202ENST00000341753 PRR14LQ5THK1 2151 aa18.56■□□□□ 0.56
TRIM28-202ENST00000341753 TRAV3A0A0B4J244 114 aa18.56■□□□□ 0.56
TRIM28-202ENST00000341753 FOXF2Q12947 444 aa18.56■□□□□ 0.56
TRIM28-202ENST00000341753 TBC1D28Q2M2D7 210 aa18.56■□□□□ 0.56
TRIM28-202ENST00000341753 KIAA1644Q3SXP7 199 aa18.56■□□□□ 0.56
TRIM28-202ENST00000341753 PRAMEF5Q5TYX0 476 aa18.56■□□□□ 0.56
TRIM28-202ENST00000341753 PRAMEF6Q5VXH4 476 aa18.56■□□□□ 0.56
TRIM28-202ENST00000341753 IL36BQ9NZH7 164 aa18.56■□□□□ 0.56
TRIM28-202ENST00000341753 FBXL7Q9UJT9 491 aa18.56■□□□□ 0.56
TRIM28-202ENST00000341753 COMPP49747 757 aaPredicted RBP18.56■□□□□ 0.56
TRIM28-202ENST00000341753 PAFAH1B2P68402 229 aa18.56■□□□□ 0.56
TRIM28-202ENST00000341753 LRFN3Q9BTN0 628 aa18.56■□□□□ 0.56
TRIM28-202ENST00000341753 DCAF16Q9NXF7 216 aa18.56■□□□□ 0.56
TRIM28-202ENST00000341753 CXorf1O96002 111 aa18.55■□□□□ 0.56
TRIM28-202ENST00000341753 MPV17P39210 176 aa18.55■□□□□ 0.56
TRIM28-202ENST00000341753 EDDM3AQ14507 147 aa18.55■□□□□ 0.56
TRIM28-202ENST00000341753 RNFT1Q5M7Z0 435 aa18.55■□□□□ 0.56
TRIM28-202ENST00000341753 ZNF766Q5HY98 468 aa18.55■□□□□ 0.56
TRIM28-202ENST00000341753 OR8I2Q8N0Y5 310 aa18.55■□□□□ 0.56
TRIM28-202ENST00000341753 FZR1Q9UM11 496 aa18.55■□□□□ 0.56
TRIM28-202ENST00000341753 OPRK1P41145 380 aa18.54■□□□□ 0.56
TRIM28-202ENST00000341753 SRSF6Q13247 344 aaKnown RBP18.54■□□□□ 0.56
TRIM28-202ENST00000341753 ZNF718Q3SXZ3 478 aa18.54■□□□□ 0.56
TRIM28-202ENST00000341753 Q8TCH9 128 aa18.54■□□□□ 0.56
TRIM28-202ENST00000341753 ABI3Q9P2A4 366 aa18.54■□□□□ 0.56
TRIM28-202ENST00000341753 SP1P08047 785 aa18.54■□□□□ 0.56
TRIM28-202ENST00000341753 PROP1O75360 226 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms