RNA–Protein interactions for RNA: ENST00000341529.7

CDH5-201, Transcript of cadherin 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH5, Length 4,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-201ENST00000341529 RNFT1Q5M7Z0 435 aa10.08□□□□□ -0.8
CDH5-201ENST00000341529 C1orf185Q5T7R7 199 aa10.08□□□□□ -0.8
CDH5-201ENST00000341529 ACP7Q6ZNF0 438 aa10.08□□□□□ -0.8
CDH5-201ENST00000341529 OR2T6Q8NHC8 308 aa10.08□□□□□ -0.8
CDH5-201ENST00000341529 TMEM45BQ96B21 275 aa10.08□□□□□ -0.8
CDH5-201ENST00000341529 C1orf147Q96MC9 270 aaPredicted RBP10.08□□□□□ -0.8
CDH5-201ENST00000341529 WDR61Q9GZS3 305 aaKnown RBP10.08□□□□□ -0.8
CDH5-201ENST00000341529 METRNQ9UJH8 293 aa10.08□□□□□ -0.8
CDH5-201ENST00000341529 ANKRD11Q6UB99 2663 aaPredicted RBP10.08□□□□□ -0.8
CDH5-201ENST00000341529 C9JQL5 133 aa10.07□□□□□ -0.8
CDH5-201ENST00000341529 LINC00869P0C866 280 aa10.07□□□□□ -0.8
CDH5-201ENST00000341529 CRYBB3P26998 211 aa10.07□□□□□ -0.8
CDH5-201ENST00000341529 PRR31Q5SQ13 230 aa10.07□□□□□ -0.8
CDH5-201ENST00000341529 LINC01560Q8TB33 94 aa10.07□□□□□ -0.8
CDH5-201ENST00000341529 SSBP3Q9BWW4 388 aaPredicted RBP10.07□□□□□ -0.8
CDH5-201ENST00000341529 LY6G6EA0A0G2JKS1 128 aa10.07□□□□□ -0.8
CDH5-201ENST00000341529 IL18BPO95998 194 aa10.07□□□□□ -0.8
CDH5-201ENST00000341529 CCL3L1P16619 93 aa10.07□□□□□ -0.8
CDH5-201ENST00000341529 KRTCAP3Q53RY4 240 aa10.07□□□□□ -0.8
CDH5-201ENST00000341529 SAXO1Q8IYX7 474 aa10.07□□□□□ -0.8
CDH5-201ENST00000341529 OR8I2Q8N0Y5 310 aa10.07□□□□□ -0.8
CDH5-201ENST00000341529 OR1L8Q8NGR8 309 aa10.07□□□□□ -0.8
CDH5-201ENST00000341529 VAMP8Q9BV40 100 aa10.07□□□□□ -0.8
CDH5-201ENST00000341529 CRIM1Q9NZV1 1036 aa10.07□□□□□ -0.8
CDH5-201ENST00000341529 U3KQA8 63 aa10.07□□□□□ -0.8
CDH5-201ENST00000341529 IGHV3OR16-8A0A075B7F1 116 aa10.07□□□□□ -0.8
CDH5-201ENST00000341529 TGOLN2O43493 480 aa10.07□□□□□ -0.8
CDH5-201ENST00000341529 SRP19P09132 144 aaKnown RBP10.07□□□□□ -0.8
CDH5-201ENST00000341529 SMIM6P0DI80 62 aa10.07□□□□□ -0.8
CDH5-201ENST00000341529 HOXA6P31267 233 aa10.07□□□□□ -0.8
CDH5-201ENST00000341529 RND2P52198 227 aa10.07□□□□□ -0.8
CDH5-201ENST00000341529 TPPP2P59282 170 aa10.07□□□□□ -0.8
CDH5-201ENST00000341529 SPCS3P61009 180 aa10.07□□□□□ -0.8
CDH5-201ENST00000341529 RSPO1Q2MKA7 263 aaPredicted RBP10.07□□□□□ -0.8
CDH5-201ENST00000341529 VN1R17PQ8TDU5 208 aa10.07□□□□□ -0.8
CDH5-201ENST00000341529 RNF166Q96A37 237 aaPredicted RBP10.07□□□□□ -0.8
CDH5-201ENST00000341529 ADTRPQ96IZ2 230 aa10.07□□□□□ -0.8
CDH5-201ENST00000341529 ASCL3Q9NQ33 180 aa10.07□□□□□ -0.8
CDH5-201ENST00000341529 IGHV2OR16-5A0A0B4J2B6 119 aa10.06□□□□□ -0.8
CDH5-201ENST00000341529 A0A0G2JRQ6 117 aa10.06□□□□□ -0.8
CDH5-201ENST00000341529 A0A1W2PN81 502 aa10.06□□□□□ -0.8
CDH5-201ENST00000341529 LYNX1G3V0Z9 82 aa10.06□□□□□ -0.8
CDH5-201ENST00000341529 LYNX1P0DP58 116 aa10.06□□□□□ -0.8
CDH5-201ENST00000341529 MFAP2P55001 183 aa10.06□□□□□ -0.8
CDH5-201ENST00000341529 GFRA1P56159 465 aa10.06□□□□□ -0.8
CDH5-201ENST00000341529 LHFPL4Q7Z7J7 247 aa10.06□□□□□ -0.8
CDH5-201ENST00000341529 OR1L6Q8NGR2 347 aa10.06□□□□□ -0.8
CDH5-201ENST00000341529 TMEM171Q8WVE6 324 aa10.06□□□□□ -0.8
CDH5-201ENST00000341529 TMUB1Q9BVT8 246 aa10.06□□□□□ -0.8
CDH5-201ENST00000341529 PRNDQ9UKY0 176 aa10.06□□□□□ -0.8
CDH5-201ENST00000341529 CARHSP1Q9Y2V2 147 aaKnown RBP10.06□□□□□ -0.8
CDH5-201ENST00000341529 C20orf202A1L168 122 aa10.06□□□□□ -0.8
CDH5-201ENST00000341529 GFRA3O60609 400 aa10.06□□□□□ -0.8
CDH5-201ENST00000341529 ATP5G3P48201 142 aa10.06□□□□□ -0.8
CDH5-201ENST00000341529 B3GALT5-AS1P59052 145 aa10.06□□□□□ -0.8
CDH5-201ENST00000341529 PDPNQ86YL7 162 aa10.06□□□□□ -0.8
CDH5-201ENST00000341529 C2orf16Q68DN1 1984 aa10.06□□□□□ -0.8
CDH5-201ENST00000341529 TRBV6-7A0A0A0MS04 114 aa10.06□□□□□ -0.8
CDH5-201ENST00000341529 ZNF785A8K8V0 405 aa10.06□□□□□ -0.8
CDH5-201ENST00000341529 ARF6P62330 175 aa10.06□□□□□ -0.8
CDH5-201ENST00000341529 PQLC2Q6ZP29 291 aa10.06□□□□□ -0.8
CDH5-201ENST00000341529 C11orf42Q8N5U0 333 aa10.06□□□□□ -0.8
CDH5-201ENST00000341529 GTF3AQ92664 365 aaKnown RBP10.06□□□□□ -0.8
CDH5-201ENST00000341529 C18orf12Q96KH6 178 aa10.06□□□□□ -0.8
CDH5-201ENST00000341529 ZNF714Q96N38 554 aa10.06□□□□□ -0.8
CDH5-201ENST00000341529 PROK2Q9HC23 129 aa10.06□□□□□ -0.8
CDH5-201ENST00000341529 C1QTNF9BB2RNN3 333 aa10.05□□□□□ -0.8
CDH5-201ENST00000341529 SLC17A3O00476 420 aa10.05□□□□□ -0.8
CDH5-201ENST00000341529 FGF16O43320 207 aa10.05□□□□□ -0.8
CDH5-201ENST00000341529 IQCJQ1A5X6 159 aa10.05□□□□□ -0.8
CDH5-201ENST00000341529 RPEL1Q2QD12 228 aa10.05□□□□□ -0.8
CDH5-201ENST00000341529 DOLPP1Q86YN1 238 aa10.05□□□□□ -0.8
CDH5-201ENST00000341529 OR5AU1Q8NGC0 362 aa10.05□□□□□ -0.8
CDH5-201ENST00000341529 KIAA1671Q9BY89 1806 aa10.05□□□□□ -0.8
CDH5-201ENST00000341529 DYSFO75923 2080 aa10.05□□□□□ -0.8
CDH5-201ENST00000341529 CXorf1O96002 111 aa10.05□□□□□ -0.8
CDH5-201ENST00000341529 MOSP00540 346 aa10.05□□□□□ -0.8
CDH5-201ENST00000341529 ADCYAP1P18509 176 aa10.05□□□□□ -0.8
CDH5-201ENST00000341529 FCER1GP30273 86 aa10.05□□□□□ -0.8
CDH5-201ENST00000341529 AARDQ4LEZ3 155 aa10.05□□□□□ -0.8
CDH5-201ENST00000341529 NOL4LQ96MY1 436 aaPredicted RBP10.05□□□□□ -0.8
CDH5-201ENST00000341529 MS4A5Q9H3V2 200 aa10.05□□□□□ -0.8
CDH5-201ENST00000341529 SEBOXQ9HB31 216 aaPredicted RBP10.05□□□□□ -0.8
CDH5-201ENST00000341529 AUP1Q9Y679 476 aa10.05□□□□□ -0.8
CDH5-201ENST00000341529 CEACAM18A8MTB9 384 aa10.05□□□□□ -0.8
CDH5-201ENST00000341529 ZNF525Q8N782 197 aa10.05□□□□□ -0.8
CDH5-201ENST00000341529 NPIPB3Q92617 1050 aa10.05□□□□□ -0.8
CDH5-201ENST00000341529 FKBP11Q9NYL4 201 aa10.05□□□□□ -0.8
CDH5-201ENST00000341529 CISD1Q9NZ45 108 aaKnown RBP10.05□□□□□ -0.8
CDH5-201ENST00000341529 IGHV3OR16-13A0A075B7E8 117 aa10.05□□□□□ -0.8
CDH5-201ENST00000341529 IGHV3-74A0A0B4J1X5 117 aa10.05□□□□□ -0.8
CDH5-201ENST00000341529 HSPE1P61604 102 aaKnown RBP10.05□□□□□ -0.8
CDH5-201ENST00000341529 C10orf113Q5VZT2 155 aa10.05□□□□□ -0.8
CDH5-201ENST00000341529 Q6ZRM9 215 aa10.05□□□□□ -0.8
CDH5-201ENST00000341529 Q8WTZ3 238 aa10.05□□□□□ -0.8
CDH5-201ENST00000341529 IMMP2LQ96T52 175 aa10.05□□□□□ -0.8
CDH5-201ENST00000341529 SCNM1Q9BWG6 230 aa10.05□□□□□ -0.8
CDH5-201ENST00000341529 SEMA5BQ9P283 1151 aa10.05□□□□□ -0.8
CDH5-201ENST00000341529 CXorf65A6NEN9 183 aa10.04□□□□□ -0.8
CDH5-201ENST00000341529 B4DEV8 164 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms