RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 ST3GAL6Q9Y274 331 aa7.34□□□□□ -1.23
ATXN3-201ENST00000340660 GADD45GO95257 159 aa7.33□□□□□ -1.24
ATXN3-201ENST00000340660 APOA2P02652 100 aa7.33□□□□□ -1.24
ATXN3-201ENST00000340660 FGF9P31371 208 aaPredicted RBP7.33□□□□□ -1.24
ATXN3-201ENST00000340660 IFNGR2P38484 337 aa7.33□□□□□ -1.24
ATXN3-201ENST00000340660 CYLC2Q14093 348 aaPredicted RBP7.33□□□□□ -1.24
ATXN3-201ENST00000340660 ATP6AP1Q15904 470 aa7.33□□□□□ -1.24
ATXN3-201ENST00000340660 NXNL2Q5VZ03 156 aa7.33□□□□□ -1.24
ATXN3-201ENST00000340660 TRAT1Q6PIZ9 186 aa7.33□□□□□ -1.24
ATXN3-201ENST00000340660 STX19Q8N4C7 294 aa7.33□□□□□ -1.24
ATXN3-201ENST00000340660 CCDC54Q8NEL0 328 aa7.33□□□□□ -1.24
ATXN3-201ENST00000340660 OR13C9Q8NGT0 318 aa7.33□□□□□ -1.24
ATXN3-201ENST00000340660 FGGYQ96C11 551 aa7.33□□□□□ -1.24
ATXN3-201ENST00000340660 CXorf58Q96LI9 332 aa7.33□□□□□ -1.24
ATXN3-201ENST00000340660 SH3GL1Q99961 368 aa7.33□□□□□ -1.24
ATXN3-201ENST00000340660 EBF4Q9BQW3 602 aa7.33□□□□□ -1.24
ATXN3-201ENST00000340660 AGMATQ9BSE5 352 aa7.33□□□□□ -1.24
ATXN3-201ENST00000340660 ZNF430Q9H8G1 570 aaPredicted RBP7.33□□□□□ -1.24
ATXN3-201ENST00000340660 ABCD2Q9UBJ2 740 aa7.33□□□□□ -1.24
ATXN3-201ENST00000340660 CACNG5Q9UF02 275 aa7.33□□□□□ -1.24
ATXN3-201ENST00000340660 IGLV11-55A0A075B6I3 123 aa7.32□□□□□ -1.24
ATXN3-201ENST00000340660 TRAV2A0A0B4J234 112 aa7.32□□□□□ -1.24
ATXN3-201ENST00000340660 OR2T8A6NH00 312 aa7.32□□□□□ -1.24
ATXN3-201ENST00000340660 RPP14O95059 124 aaKnown RBP7.32□□□□□ -1.24
ATXN3-201ENST00000340660 OCM2P0CE71 109 aa7.32□□□□□ -1.24
ATXN3-201ENST00000340660 OCMP0CE72 109 aaPredicted RBP7.32□□□□□ -1.24
ATXN3-201ENST00000340660 KISS1Q15726 138 aa7.32□□□□□ -1.24
ATXN3-201ENST00000340660 LINC01620Q4KN68 170 aa7.32□□□□□ -1.24
ATXN3-201ENST00000340660 OR10K2Q6IF99 312 aa7.32□□□□□ -1.24
ATXN3-201ENST00000340660 ZNF773Q6PK81 442 aa7.32□□□□□ -1.24
ATXN3-201ENST00000340660 ZNF322Q6U7Q0 402 aaPredicted RBP7.32□□□□□ -1.24
ATXN3-201ENST00000340660 PXT1Q8NFP0 134 aa7.32□□□□□ -1.24
ATXN3-201ENST00000340660 OR9Q2Q8NGE9 314 aa7.32□□□□□ -1.24
ATXN3-201ENST00000340660 FCGR1BQ92637 280 aa7.32□□□□□ -1.24
ATXN3-201ENST00000340660 RAB24Q969Q5 203 aa7.32□□□□□ -1.24
ATXN3-201ENST00000340660 LINC01600Q96MT4 127 aa7.32□□□□□ -1.24
ATXN3-201ENST00000340660 KCTD14Q9BQ13 255 aaPredicted RBP7.32□□□□□ -1.24
ATXN3-201ENST00000340660 E7EUB6 86 aa7.31□□□□□ -1.24
ATXN3-201ENST00000340660 ZNF688P0C7X2 276 aa7.31□□□□□ -1.24
ATXN3-201ENST00000340660 DEFB130BP0DP73 79 aa7.31□□□□□ -1.24
ATXN3-201ENST00000340660 DEFB130AP0DP74 79 aa7.31□□□□□ -1.24
ATXN3-201ENST00000340660 AREGP15514 252 aa7.31□□□□□ -1.24
ATXN3-201ENST00000340660 SLC2A5P22732 501 aa7.31□□□□□ -1.24
ATXN3-201ENST00000340660 RBM11P57052 281 aaKnown RBP7.31□□□□□ -1.24
ATXN3-201ENST00000340660 ELAC2Q9BQ52 826 aaKnown RBP7.31□□□□□ -1.24
ATXN3-201ENST00000340660 NUPL2O15504 423 aaKnown RBP7.3□□□□□ -1.24
ATXN3-201ENST00000340660 IGLV2-11P01706 119 aa7.3□□□□□ -1.24
ATXN3-201ENST00000340660 ATP5G1P05496 136 aa7.3□□□□□ -1.24
ATXN3-201ENST00000340660 ATP5G3P48201 142 aa7.3□□□□□ -1.24
ATXN3-201ENST00000340660 CXCR4P61073 352 aa7.3□□□□□ -1.24
ATXN3-201ENST00000340660 NHLRC3Q5JS37 347 aa7.3□□□□□ -1.24
ATXN3-201ENST00000340660 MSRB1Q9NZV6 116 aa7.3□□□□□ -1.24
ATXN3-201ENST00000340660 RABAC1Q9UI14 185 aa7.3□□□□□ -1.24
ATXN3-201ENST00000340660 IL6RP08887 468 aaPredicted RBP7.29□□□□□ -1.24
ATXN3-201ENST00000340660 UBE2KP61086 200 aa7.29□□□□□ -1.24
ATXN3-201ENST00000340660 NUTF2P61970 127 aaKnown RBP7.29□□□□□ -1.24
ATXN3-201ENST00000340660 RSU1Q15404 277 aa7.29□□□□□ -1.24
ATXN3-201ENST00000340660 SLC35D3Q5M8T2 416 aa7.29□□□□□ -1.24
ATXN3-201ENST00000340660 RXFP4Q8TDU9 374 aa7.29□□□□□ -1.24
ATXN3-201ENST00000340660 GNPNAT1Q96EK6 184 aaPredicted RBP7.29□□□□□ -1.24
ATXN3-201ENST00000340660 PELI1Q96FA3 418 aa7.29□□□□□ -1.24
ATXN3-201ENST00000340660 NEDD4LQ96PU5 975 aa7.29□□□□□ -1.24
ATXN3-201ENST00000340660 RAB40CQ96S21 281 aa7.29□□□□□ -1.24
ATXN3-201ENST00000340660 TMEM14AQ9Y6G1 99 aa7.29□□□□□ -1.24
ATXN3-201ENST00000340660 TRAV26-1A0A087WT03 109 aa7.28□□□□□ -1.24
ATXN3-201ENST00000340660 DPPA5A6NC42 116 aa7.28□□□□□ -1.24
ATXN3-201ENST00000340660 K7EQG2 157 aa7.28□□□□□ -1.24
ATXN3-201ENST00000340660 HBE1P02100 147 aa7.28□□□□□ -1.24
ATXN3-201ENST00000340660 HIST1H1BP16401 226 aaKnown RBP7.28□□□□□ -1.24
ATXN3-201ENST00000340660 SMIM11AP58511 58 aa7.28□□□□□ -1.24
ATXN3-201ENST00000340660 KRTAP10-8P60410 259 aa7.28□□□□□ -1.24
ATXN3-201ENST00000340660 ACOT6Q3I5F7 207 aaPredicted RBP7.28□□□□□ -1.24
ATXN3-201ENST00000340660 ZNF554Q86TJ5 538 aa7.28□□□□□ -1.24
ATXN3-201ENST00000340660 CPOQ8IVL8 374 aa7.28□□□□□ -1.24
ATXN3-201ENST00000340660 OR52N1Q8NH53 320 aa7.28□□□□□ -1.24
ATXN3-201ENST00000340660 GALMQ96C23 342 aa7.28□□□□□ -1.24
ATXN3-201ENST00000340660 GRAMD2BQ96HH9 432 aa7.28□□□□□ -1.24
ATXN3-201ENST00000340660 PAIP2Q9BPZ3 127 aaKnown RBP7.28□□□□□ -1.24
ATXN3-201ENST00000340660 CCDC28BQ9BUN5 200 aa7.28□□□□□ -1.24
ATXN3-201ENST00000340660 REEP1Q9H902 201 aa7.28□□□□□ -1.24
ATXN3-201ENST00000340660 IL1RAPQ9NPH3 570 aa7.28□□□□□ -1.24
ATXN3-201ENST00000340660 KCNIP1Q9NZI2 227 aa7.28□□□□□ -1.24
ATXN3-201ENST00000340660 STEAP1Q9UHE8 339 aa7.28□□□□□ -1.24
ATXN3-201ENST00000340660 TMA7Q9Y2S6 64 aaKnown RBP7.28□□□□□ -1.24
ATXN3-201ENST00000340660 A0A0J9YY99 117 aa7.27□□□□□ -1.25
ATXN3-201ENST00000340660 CCDC182A6NF36 153 aa7.27□□□□□ -1.25
ATXN3-201ENST00000340660 LYRM9A8MSI8 78 aa7.27□□□□□ -1.25
ATXN3-201ENST00000340660 GABRPO00591 440 aa7.27□□□□□ -1.25
ATXN3-201ENST00000340660 NXPH4O95158 308 aa7.27□□□□□ -1.25
ATXN3-201ENST00000340660 APOHP02749 345 aaPredicted RBP7.27□□□□□ -1.25
ATXN3-201ENST00000340660 ISG15P05161 165 aa7.27□□□□□ -1.25
ATXN3-201ENST00000340660 PTBP1P26599 531 aaKnown RBP eCLIP7.27□□□□□ -1.254e-18■■■■■ 40.6
ATXN3-201ENST00000340660 CAPGP40121 348 aa7.27□□□□□ -1.25
ATXN3-201ENST00000340660 CDKN1BP46527 198 aa7.27□□□□□ -1.25
ATXN3-201ENST00000340660 FXYD7P58549 80 aa7.27□□□□□ -1.25
ATXN3-201ENST00000340660 CKAP4Q07065 602 aaKnown RBP7.27□□□□□ -1.25
ATXN3-201ENST00000340660 FCN2Q15485 313 aa7.27□□□□□ -1.25
ATXN3-201ENST00000340660 VMA21Q3ZAQ7 101 aa7.27□□□□□ -1.25
ATXN3-201ENST00000340660 DUSP18Q8NEJ0 188 aa7.27□□□□□ -1.25
ATXN3-201ENST00000340660 TNFAIP8L1Q8WVP5 186 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms