RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 ZP1P60852 638 aa10.68□□□□□ -0.7
LIN54-201ENST00000340417 MYPOPQ86VE0 399 aaPredicted RBP10.68□□□□□ -0.7
LIN54-201ENST00000340417 YPEL2Q96QA6 119 aa10.68□□□□□ -0.7
LIN54-201ENST00000340417 SOSTQ9BQB4 213 aa10.68□□□□□ -0.7
LIN54-201ENST00000340417 IGHV3-48P01763 117 aa10.67□□□□□ -0.7
LIN54-201ENST00000340417 MYOD1P15172 320 aa10.67□□□□□ -0.7
LIN54-201ENST00000340417 MRPL30Q8TCC3 161 aaKnown RBP10.67□□□□□ -0.7
LIN54-201ENST00000340417 MIXL1Q9H2W2 232 aa10.67□□□□□ -0.7
LIN54-201ENST00000340417 C21orf62Q9NYP8 219 aa10.67□□□□□ -0.7
LIN54-201ENST00000340417 ZNF319Q9P2F9 582 aa10.67□□□□□ -0.7
LIN54-201ENST00000340417 EGR1P18146 543 aa10.67□□□□□ -0.7
LIN54-201ENST00000340417 KIAA0141Q14154 515 aaPredicted RBP10.67□□□□□ -0.7
LIN54-201ENST00000340417 EFNB3Q15768 340 aa10.67□□□□□ -0.7
LIN54-201ENST00000340417 RUSC1-AS1Q66K80 236 aa10.67□□□□□ -0.7
LIN54-201ENST00000340417 H7BYZ3 331 aa10.67□□□□□ -0.7
LIN54-201ENST00000340417 CCL1P22362 96 aa10.67□□□□□ -0.7
LIN54-201ENST00000340417 S100A12P80511 92 aa10.67□□□□□ -0.7
LIN54-201ENST00000340417 TPTE2P1Q5T6R2 138 aa10.67□□□□□ -0.7
LIN54-201ENST00000340417 IL22RA2Q969J5 263 aa10.67□□□□□ -0.7
LIN54-201ENST00000340417 PAXXQ9BUH6 204 aa10.67□□□□□ -0.7
LIN54-201ENST00000340417 TBL2Q9Y4P3 447 aaKnown RBP10.67□□□□□ -0.7
LIN54-201ENST00000340417 FBXL17Q9UF56 701 aa10.67□□□□□ -0.7
LIN54-201ENST00000340417 IGHV3-66A0A0C4DH42 116 aa10.67□□□□□ -0.7
LIN54-201ENST00000340417 OOSP1A8MZH6 123 aa10.67□□□□□ -0.7
LIN54-201ENST00000340417 M6PRP20645 277 aa10.67□□□□□ -0.7
LIN54-201ENST00000340417 PLAC9Q5JTB6 97 aa10.67□□□□□ -0.7
LIN54-201ENST00000340417 BPIFA4PQ86YQ2 179 aa10.67□□□□□ -0.7
LIN54-201ENST00000340417 FAM216AQ8WUB2 273 aa10.67□□□□□ -0.7
LIN54-201ENST00000340417 TRAV41A0A0B4J266 112 aa10.66□□□□□ -0.7
LIN54-201ENST00000340417 C1QBP02746 253 aa10.66□□□□□ -0.7
LIN54-201ENST00000340417 TMEM41BQ5BJD5 291 aa10.66□□□□□ -0.7
LIN54-201ENST00000340417 DGAT2L7PQ6IED9 249 aa10.66□□□□□ -0.7
LIN54-201ENST00000340417 DMRTA2Q96SC8 542 aa10.66□□□□□ -0.7
LIN54-201ENST00000340417 ZNF705GA8MUZ8 300 aaPredicted RBP10.66□□□□□ -0.7
LIN54-201ENST00000340417 KRBOX1C9JBD0 128 aa10.66□□□□□ -0.7
LIN54-201ENST00000340417 H0Y8G0 127 aa10.66□□□□□ -0.7
LIN54-201ENST00000340417 CA2P00918 260 aa10.66□□□□□ -0.7
LIN54-201ENST00000340417 GPR146Q96CH1 333 aa10.66□□□□□ -0.7
LIN54-201ENST00000340417 PTPRQQ9UMZ3 2332 aa10.66□□□□□ -0.7
LIN54-201ENST00000340417 IL4P05112 153 aa10.66□□□□□ -0.7
LIN54-201ENST00000340417 ZP3P21754 424 aa10.66□□□□□ -0.7
LIN54-201ENST00000340417 RAG2P55895 527 aa10.66□□□□□ -0.7
LIN54-201ENST00000340417 MORN2Q502X0 79 aa10.66□□□□□ -0.7
LIN54-201ENST00000340417 FAM209BQ5JX69 171 aa10.66□□□□□ -0.7
LIN54-201ENST00000340417 SVBPQ8N300 66 aa10.66□□□□□ -0.7
LIN54-201ENST00000340417 GBGT1Q8N5D6 347 aa10.66□□□□□ -0.7
LIN54-201ENST00000340417 GAFA1Q96PS6 74 aa10.66□□□□□ -0.7
LIN54-201ENST00000340417 ELF5Q9UKW6 265 aaPredicted RBP10.66□□□□□ -0.7
LIN54-201ENST00000340417 MFNGO00587 321 aa10.66□□□□□ -0.7
LIN54-201ENST00000340417 ZNF735P0CB33 412 aa10.66□□□□□ -0.7
LIN54-201ENST00000340417 SAA4P35542 130 aa10.66□□□□□ -0.7
LIN54-201ENST00000340417 ZNF497Q6ZNH5 498 aa10.66□□□□□ -0.7
LIN54-201ENST00000340417 NRGNQ92686 78 aa10.66□□□□□ -0.7
LIN54-201ENST00000340417 VOPP1Q96AW1 172 aa10.66□□□□□ -0.7
LIN54-201ENST00000340417 C1orf196B1AJZ1 125 aa10.66□□□□□ -0.7
LIN54-201ENST00000340417 SNRPCP09234 159 aaKnown RBP10.66□□□□□ -0.7
LIN54-201ENST00000340417 FGF8P55075 233 aaPredicted RBP10.66□□□□□ -0.7
LIN54-201ENST00000340417 ICMTO60725 284 aa10.65□□□□□ -0.7
LIN54-201ENST00000340417 MIDNQ504T8 468 aa10.65□□□□□ -0.7
LIN54-201ENST00000340417 FOXA2Q9Y261 457 aaPredicted RBP10.65□□□□□ -0.7
LIN54-201ENST00000340417 HEATR1Q9H583 2144 aaKnown RBP10.65□□□□□ -0.7
LIN54-201ENST00000340417 SIAH2O43255 324 aa10.65□□□□□ -0.7
LIN54-201ENST00000340417 SOD3P08294 240 aa10.65□□□□□ -0.7
LIN54-201ENST00000340417 RPS10P46783 165 aaKnown RBP10.65□□□□□ -0.7
LIN54-201ENST00000340417 RANP62826 216 aaKnown RBP10.65□□□□□ -0.7
LIN54-201ENST00000340417 EWSR1Q01844 656 aaKnown RBP eCLIP10.65□□□□□ -0.7
LIN54-201ENST00000340417 TMEM177Q53S58 311 aa10.65□□□□□ -0.7
LIN54-201ENST00000340417 BAGE3Q86Y29 109 aa10.65□□□□□ -0.7
LIN54-201ENST00000340417 BAGE2Q86Y30 109 aa10.65□□□□□ -0.7
LIN54-201ENST00000340417 SELENOHQ8IZQ5 122 aaKnown RBP10.65□□□□□ -0.7
LIN54-201ENST00000340417 HKR1P10072 659 aa10.65□□□□□ -0.7
LIN54-201ENST00000340417 RPL7P18124 248 aaKnown RBP10.65□□□□□ -0.7
LIN54-201ENST00000340417 NECAP1Q8NC96 275 aa10.65□□□□□ -0.7
LIN54-201ENST00000340417 WNT10AQ9GZT5 417 aa10.65□□□□□ -0.7
LIN54-201ENST00000340417 PLXND1Q9Y4D7 1925 aa10.65□□□□□ -0.7
LIN54-201ENST00000340417 ZNF737O75373 536 aa10.65□□□□□ -0.7
LIN54-201ENST00000340417 HEPN1Q6WQI6 88 aa10.65□□□□□ -0.7
LIN54-201ENST00000340417 CTDSP1Q9GZU7 261 aa10.65□□□□□ -0.7
LIN54-201ENST00000340417 ZNF407Q9C0G0 2248 aa10.65□□□□□ -0.7
LIN54-201ENST00000340417 TRAV24A0A0B4J272 114 aa10.65□□□□□ -0.71
LIN54-201ENST00000340417 RGS13O14921 159 aa10.65□□□□□ -0.71
LIN54-201ENST00000340417 CD177Q8N6Q3 437 aa10.65□□□□□ -0.71
LIN54-201ENST00000340417 KLHL30-AS1Q8NEE0 82 aa10.65□□□□□ -0.71
LIN54-201ENST00000340417 CUL9Q8IWT3 2517 aa10.64□□□□□ -0.71
LIN54-201ENST00000340417 USF3Q68DE3 2245 aa10.64□□□□□ -0.71
LIN54-201ENST00000340417 SPTBN1Q01082 2364 aaKnown RBP10.64□□□□□ -0.71
LIN54-201ENST00000340417 HIST3H3Q16695 136 aa10.64□□□□□ -0.71
LIN54-201ENST00000340417 AP1S3Q96PC3 154 aa10.64□□□□□ -0.71
LIN54-201ENST00000340417 RRHO14718 337 aa10.64□□□□□ -0.71
LIN54-201ENST00000340417 HLA-DQB1P01920 261 aa10.64□□□□□ -0.71
LIN54-201ENST00000340417 TDGF1P3P51864 188 aa10.64□□□□□ -0.71
LIN54-201ENST00000340417 HLA-DRB5Q30154 266 aa10.64□□□□□ -0.71
LIN54-201ENST00000340417 H1FOOQ8IZA3 346 aaPredicted RBP10.64□□□□□ -0.71
LIN54-201ENST00000340417 NPIPB3Q92617 1050 aa10.64□□□□□ -0.71
LIN54-201ENST00000340417 FAM208BQ5VWN6 2430 aa10.64□□□□□ -0.71
LIN54-201ENST00000340417 MGPP08493 103 aa10.64□□□□□ -0.71
LIN54-201ENST00000340417 MAS1LP35410 378 aa10.64□□□□□ -0.71
LIN54-201ENST00000340417 RHOGP84095 191 aa10.64□□□□□ -0.71
LIN54-201ENST00000340417 CD69Q07108 199 aa10.64□□□□□ -0.71
LIN54-201ENST00000340417 RGP1Q92546 391 aaPredicted RBP10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms