RNA–Protein interactions for RNA: ENST00000340006.6

CSRP1-201, Transcript of cysteine and glycine rich protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSRP1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-201ENST00000340006 ERVK-16P61578 105 aa11.82□□□□□ -0.52
CSRP1-201ENST00000340006 PIFOQ8TCI5 191 aa11.82□□□□□ -0.52
CSRP1-201ENST00000340006 SSMEM1Q8WWF3 244 aa11.82□□□□□ -0.52
CSRP1-201ENST00000340006 RRNAD1Q96FB5 475 aaKnown RBP11.82□□□□□ -0.52
CSRP1-201ENST00000340006 RNF5Q99942 180 aa11.82□□□□□ -0.52
CSRP1-201ENST00000340006 RANBP3Q9H6Z4 567 aaPredicted RBP11.82□□□□□ -0.52
CSRP1-201ENST00000340006 PITPNC1Q9UKF7 332 aa11.82□□□□□ -0.52
CSRP1-201ENST00000340006 TMED3Q9Y3Q3 217 aa11.82□□□□□ -0.52
CSRP1-201ENST00000340006 MTORP42345 2549 aa11.82□□□□□ -0.52
CSRP1-201ENST00000340006 PIGBOS1A0A0B4J2F0 54 aa11.81□□□□□ -0.52
CSRP1-201ENST00000340006 SRRM4A7MD48 611 aaKnown RBP11.81□□□□□ -0.52
CSRP1-201ENST00000340006 CNTFRP26992 372 aa11.81□□□□□ -0.52
CSRP1-201ENST00000340006 F2RL1P55085 397 aa11.81□□□□□ -0.52
CSRP1-201ENST00000340006 CYCSP99999 105 aaKnown RBP11.81□□□□□ -0.52
CSRP1-201ENST00000340006 PLGLAQ15195 96 aa11.81□□□□□ -0.52
CSRP1-201ENST00000340006 MMDQ15546 238 aa11.81□□□□□ -0.52
CSRP1-201ENST00000340006 IAH1Q2TAA2 248 aaPredicted RBP11.81□□□□□ -0.52
CSRP1-201ENST00000340006 TMEM219Q86XT9 240 aa11.81□□□□□ -0.52
CSRP1-201ENST00000340006 RHOVQ96L33 236 aa11.81□□□□□ -0.52
CSRP1-201ENST00000340006 TSNAXQ99598 290 aaKnown RBP11.81□□□□□ -0.52
CSRP1-201ENST00000340006 KIAA1456Q9P272 454 aa11.81□□□□□ -0.52
CSRP1-201ENST00000340006 DUXBA0A1W2PPF3 345 aa11.81□□□□□ -0.52
CSRP1-201ENST00000340006 MARCH11A6NNE9 402 aa11.81□□□□□ -0.52
CSRP1-201ENST00000340006 IGKV1-39P01597 117 aa11.81□□□□□ -0.52
CSRP1-201ENST00000340006 IGKV1D-39P04432 117 aa11.81□□□□□ -0.52
CSRP1-201ENST00000340006 VDAC1P21796 283 aa11.81□□□□□ -0.52
CSRP1-201ENST00000340006 EBI3Q14213 229 aa11.81□□□□□ -0.52
CSRP1-201ENST00000340006 H2BFWTQ7Z2G1 175 aa11.81□□□□□ -0.52
CSRP1-201ENST00000340006 OR5R1Q8NH85 324 aa11.81□□□□□ -0.52
CSRP1-201ENST00000340006 PPP1R1CQ8WVI7 109 aa11.81□□□□□ -0.52
CSRP1-201ENST00000340006 C2orf50Q96LR7 162 aa11.81□□□□□ -0.52
CSRP1-201ENST00000340006 NMES1Q9C002 83 aa11.81□□□□□ -0.52
CSRP1-201ENST00000340006 PRDM13Q9H4Q3 707 aa11.81□□□□□ -0.52
CSRP1-201ENST00000340006 C1RLQ9NZP8 487 aa11.81□□□□□ -0.52
CSRP1-201ENST00000340006 COMMD9Q9P000 198 aa11.81□□□□□ -0.52
CSRP1-201ENST00000340006 CRLF1O75462 422 aa11.8□□□□□ -0.52
CSRP1-201ENST00000340006 VMA21Q3ZAQ7 101 aa11.8□□□□□ -0.52
CSRP1-201ENST00000340006 LRRC37A5PQ49AS3 106 aa11.8□□□□□ -0.52
CSRP1-201ENST00000340006 OR11H4Q8NGC9 324 aa11.8□□□□□ -0.52
CSRP1-201ENST00000340006 ZNF418Q8TF45 676 aaPredicted RBP11.8□□□□□ -0.52
CSRP1-201ENST00000340006 HYLS1Q96M11 299 aa11.8□□□□□ -0.52
CSRP1-201ENST00000340006 DUX5Q96PT3 197 aa11.8□□□□□ -0.52
CSRP1-201ENST00000340006 GSKIPQ9P0R6 139 aa11.8□□□□□ -0.52
CSRP1-201ENST00000340006 TCF19Q9Y242 345 aa11.8□□□□□ -0.52
CSRP1-201ENST00000340006 NIPBLQ6KC79 2804 aaeCLIP11.8□□□□□ -0.52
CSRP1-201ENST00000340006 SLC25A17O43808 307 aa11.79□□□□□ -0.52
CSRP1-201ENST00000340006 FGL1Q08830 312 aa11.79□□□□□ -0.52
CSRP1-201ENST00000340006 FBLN7Q53RD9 439 aa11.79□□□□□ -0.52
CSRP1-201ENST00000340006 SLC25A33Q9BSK2 321 aa11.79□□□□□ -0.52
CSRP1-201ENST00000340006 METTL1Q9UBP6 276 aaKnown RBP11.79□□□□□ -0.52
CSRP1-201ENST00000340006 NSD1Q96L73 2696 aaPredicted RBP11.79□□□□□ -0.52
CSRP1-201ENST00000340006 NBR2O15453 112 aa11.79□□□□□ -0.52
CSRP1-201ENST00000340006 RBMXL2O75526 392 aaKnown RBP11.79□□□□□ -0.52
CSRP1-201ENST00000340006 FAM157CP0CG43 387 aa11.79□□□□□ -0.52
CSRP1-201ENST00000340006 PSG5Q15238 335 aa11.79□□□□□ -0.52
CSRP1-201ENST00000340006 NMSQ5H8A3 153 aa11.79□□□□□ -0.52
CSRP1-201ENST00000340006 RBM14Q96PK6 669 aaKnown RBP11.79□□□□□ -0.52
CSRP1-201ENST00000340006 CLCC1Q96S66 551 aa11.79□□□□□ -0.52
CSRP1-201ENST00000340006 CUBNO60494 3623 aa11.79□□□□□ -0.52
CSRP1-201ENST00000340006 ANK3Q12955 4377 aaKnown RBP11.78□□□□□ -0.52
CSRP1-201ENST00000340006 SAA1P0DJI8 122 aaPredicted RBP11.78□□□□□ -0.52
CSRP1-201ENST00000340006 IL15RAQ13261 267 aa11.78□□□□□ -0.52
CSRP1-201ENST00000340006 IZUMO4Q1ZYL8 232 aa11.78□□□□□ -0.52
CSRP1-201ENST00000340006 OR4A47Q6IF82 309 aa11.78□□□□□ -0.52
CSRP1-201ENST00000340006 OR8H1Q8NGG4 311 aa11.78□□□□□ -0.52
CSRP1-201ENST00000340006 VSTM2AQ8TAG5 236 aa11.78□□□□□ -0.52
CSRP1-201ENST00000340006 SUN5Q8TC36 379 aa11.78□□□□□ -0.52
CSRP1-201ENST00000340006 RASL11BQ9BPW5 248 aa11.78□□□□□ -0.52
CSRP1-201ENST00000340006 FBXL15Q9H469 300 aa11.78□□□□□ -0.52
CSRP1-201ENST00000340006 TMEM140Q9NV12 185 aa11.78□□□□□ -0.52
CSRP1-201ENST00000340006 TRAV14DV4A0A0A6YYC5 116 aa11.78□□□□□ -0.52
CSRP1-201ENST00000340006 A0A0G2JRQ6 117 aa11.78□□□□□ -0.52
CSRP1-201ENST00000340006 A6NDX4 124 aa11.78□□□□□ -0.52
CSRP1-201ENST00000340006 RRHO14718 337 aa11.78□□□□□ -0.52
CSRP1-201ENST00000340006 SNAPC5O75971 98 aa11.78□□□□□ -0.52
CSRP1-201ENST00000340006 IGKV1-5P01602 117 aa11.78□□□□□ -0.52
CSRP1-201ENST00000340006 IGLV2-23P01705 113 aa11.78□□□□□ -0.52
CSRP1-201ENST00000340006 UBE2KP61086 200 aa11.78□□□□□ -0.52
CSRP1-201ENST00000340006 FAM219AQ8IW50 185 aa11.78□□□□□ -0.52
CSRP1-201ENST00000340006 Q8N6K4 173 aa11.78□□□□□ -0.52
CSRP1-201ENST00000340006 TEX45Q8NA69 505 aa11.78□□□□□ -0.52
CSRP1-201ENST00000340006 NPBQ8NG41 125 aa11.78□□□□□ -0.52
CSRP1-201ENST00000340006 OR4A16Q8NH70 328 aa11.78□□□□□ -0.52
CSRP1-201ENST00000340006 GRPEL2Q8TAA5 225 aa11.78□□□□□ -0.52
CSRP1-201ENST00000340006 SPIN2AQ99865 258 aa11.78□□□□□ -0.52
CSRP1-201ENST00000340006 SPIN2BQ9BPZ2 258 aa11.78□□□□□ -0.52
CSRP1-201ENST00000340006 PLSCR3Q9NRY6 295 aa11.78□□□□□ -0.52
CSRP1-201ENST00000340006 MMP24Q9Y5R2 645 aa11.78□□□□□ -0.52
CSRP1-201ENST00000340006 POMT1Q9Y6A1 747 aa11.78□□□□□ -0.52
CSRP1-201ENST00000340006 OR2F2O95006 317 aa11.77□□□□□ -0.53
CSRP1-201ENST00000340006 MPC2O95563 127 aa11.77□□□□□ -0.53
CSRP1-201ENST00000340006 PSMB6P28072 239 aa11.77□□□□□ -0.53
CSRP1-201ENST00000340006 RAB32Q13637 225 aa11.77□□□□□ -0.53
CSRP1-201ENST00000340006 LSM10Q969L4 123 aaKnown RBP11.77□□□□□ -0.53
CSRP1-201ENST00000340006 GPR146Q96CH1 333 aa11.77□□□□□ -0.53
CSRP1-201ENST00000340006 VPREB3Q9UKI3 123 aa11.77□□□□□ -0.53
CSRP1-201ENST00000340006 NSG2Q9Y328 171 aa11.77□□□□□ -0.53
CSRP1-201ENST00000340006 FXYD6-FXYD2A0A087WZ82 144 aa11.76□□□□□ -0.53
CSRP1-201ENST00000340006 M6PRP20645 277 aa11.76□□□□□ -0.53
CSRP1-201ENST00000340006 C11orf87Q6NUJ2 197 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms