RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 CD81P60033 236 aa8.1□□□□□ -1.11
CAPN3-202ENST00000337571 C15orf32Q32M92 178 aa8.1□□□□□ -1.11
CAPN3-202ENST00000337571 UBE2UQ5VVX9 321 aa8.1□□□□□ -1.11
CAPN3-202ENST00000337571 ZNF66Q6ZN08 573 aa8.1□□□□□ -1.11
CAPN3-202ENST00000337571 NR2C2APQ86WQ0 139 aa8.1□□□□□ -1.11
CAPN3-202ENST00000337571 VKORC1L1Q8N0U8 176 aa8.1□□□□□ -1.11
CAPN3-202ENST00000337571 SPARTQ8N0X7 666 aa8.1□□□□□ -1.11
CAPN3-202ENST00000337571 MFSD4AQ8N468 514 aa8.1□□□□□ -1.11
CAPN3-202ENST00000337571 NUDCD2Q8WVJ2 157 aa8.1□□□□□ -1.11
CAPN3-202ENST00000337571 TAS2R8Q9NYW2 309 aa8.1□□□□□ -1.11
CAPN3-202ENST00000337571 FBXL7Q9UJT9 491 aa8.1□□□□□ -1.11
CAPN3-202ENST00000337571 DNAH7Q8WXX0 4024 aa8.1□□□□□ -1.11
CAPN3-202ENST00000337571 IZUMO1RA6ND01 250 aa8.09□□□□□ -1.11
CAPN3-202ENST00000337571 A6NHS1 94 aa8.09□□□□□ -1.11
CAPN3-202ENST00000337571 HMX3A6NHT5 357 aa8.09□□□□□ -1.11
CAPN3-202ENST00000337571 BMPR1BO00238 502 aa8.09□□□□□ -1.11
CAPN3-202ENST00000337571 RBMXL2O75526 392 aaKnown RBP8.09□□□□□ -1.11
CAPN3-202ENST00000337571 KBTBD11O94819 623 aa8.09□□□□□ -1.11
CAPN3-202ENST00000337571 KIR2DS2P43631 304 aa8.09□□□□□ -1.11
CAPN3-202ENST00000337571 RPL27AP46776 148 aaKnown RBP8.09□□□□□ -1.11
CAPN3-202ENST00000337571 RPL30P62888 115 aaKnown RBP8.09□□□□□ -1.11
CAPN3-202ENST00000337571 ZNF45Q02386 682 aa8.09□□□□□ -1.11
CAPN3-202ENST00000337571 MXD1Q05195 221 aa8.09□□□□□ -1.11
CAPN3-202ENST00000337571 GUCA2BQ16661 112 aa8.09□□□□□ -1.11
CAPN3-202ENST00000337571 FAM106AQ4KMX7 169 aa8.09□□□□□ -1.11
CAPN3-202ENST00000337571 C10orf55Q5SWW7 151 aa8.09□□□□□ -1.11
CAPN3-202ENST00000337571 SFXN4Q6P4A7 337 aa8.09□□□□□ -1.11
CAPN3-202ENST00000337571 LAX1Q8IWV1 398 aa8.09□□□□□ -1.11
CAPN3-202ENST00000337571 NEURL2Q9BR09 285 aa8.09□□□□□ -1.11
CAPN3-202ENST00000337571 YTHDF1Q9BYJ9 559 aaKnown RBP8.09□□□□□ -1.11
CAPN3-202ENST00000337571 TRAV18A0A075B6X5 111 aa8.08□□□□□ -1.12
CAPN3-202ENST00000337571 IGKV1D-13A0A0B4J2D9 117 aa8.08□□□□□ -1.12
CAPN3-202ENST00000337571 ZNF320A2RRD8 509 aa8.08□□□□□ -1.12
CAPN3-202ENST00000337571 NPIPB5A8MRT5 1133 aa8.08□□□□□ -1.12
CAPN3-202ENST00000337571 PPP5D1E7EU14 171 aa8.08□□□□□ -1.12
CAPN3-202ENST00000337571 OR2C1O95371 312 aa8.08□□□□□ -1.12
CAPN3-202ENST00000337571 IGKV1-13P0DP09 117 aa8.08□□□□□ -1.12
CAPN3-202ENST00000337571 FOLR2P14207 255 aa8.08□□□□□ -1.12
CAPN3-202ENST00000337571 HIST1H1BP16401 226 aaKnown RBP8.08□□□□□ -1.12
CAPN3-202ENST00000337571 FCGR2CP31995 323 aa8.08□□□□□ -1.12
CAPN3-202ENST00000337571 MECP2P51608 486 aaKnown RBP8.08□□□□□ -1.12
CAPN3-202ENST00000337571 SCAND1P57086 179 aa8.08□□□□□ -1.12
CAPN3-202ENST00000337571 DEFB114Q30KQ6 69 aa8.08□□□□□ -1.12
CAPN3-202ENST00000337571 CD300EQ496F6 205 aaPredicted RBP8.08□□□□□ -1.12
CAPN3-202ENST00000337571 SSX9Q7RTT3 188 aa8.08□□□□□ -1.12
CAPN3-202ENST00000337571 BEST4Q8NFU0 473 aa8.08□□□□□ -1.12
CAPN3-202ENST00000337571 IL17DQ8TAD2 202 aa8.08□□□□□ -1.12
CAPN3-202ENST00000337571 TMEM167AQ8TBQ9 72 aa8.08□□□□□ -1.12
CAPN3-202ENST00000337571 LGALS14Q8TCE9 139 aa8.08□□□□□ -1.12
CAPN3-202ENST00000337571 SECTM1Q8WVN6 248 aa8.08□□□□□ -1.12
CAPN3-202ENST00000337571 EEF1AKMT3Q96AZ1 226 aa8.08□□□□□ -1.12
CAPN3-202ENST00000337571 EDA2RQ9HAV5 297 aa8.08□□□□□ -1.12
CAPN3-202ENST00000337571 PLEKHA3Q9HB20 300 aa8.08□□□□□ -1.12
CAPN3-202ENST00000337571 HRASLSQ9HDD0 168 aa8.08□□□□□ -1.12
CAPN3-202ENST00000337571 DIABLOQ9NR28 239 aa8.08□□□□□ -1.12
CAPN3-202ENST00000337571 SLC2A9Q9NRM0 540 aa8.08□□□□□ -1.12
CAPN3-202ENST00000337571 RHBDL2Q9NX52 303 aa8.08□□□□□ -1.12
CAPN3-202ENST00000337571 TECRQ9NZ01 308 aaKnown RBP8.08□□□□□ -1.12
CAPN3-202ENST00000337571 ETV7Q9Y603 341 aa8.08□□□□□ -1.12
CAPN3-202ENST00000337571 CEPT1Q9Y6K0 416 aa8.08□□□□□ -1.12
CAPN3-202ENST00000337571 LOC100506127A0A0U1RQW1 187 aa8.07□□□□□ -1.12
CAPN3-202ENST00000337571 LGALS9O00182 355 aa8.07□□□□□ -1.12
CAPN3-202ENST00000337571 CYB5BO43169 146 aa8.07□□□□□ -1.12
CAPN3-202ENST00000337571 TNFSF12O43508 249 aa8.07□□□□□ -1.12
CAPN3-202ENST00000337571 SSX5O60225 188 aa8.07□□□□□ -1.12
CAPN3-202ENST00000337571 IGLV2-14P01704 120 aa8.07□□□□□ -1.12
CAPN3-202ENST00000337571 HLA-GP17693 338 aa8.07□□□□□ -1.12
CAPN3-202ENST00000337571 PSMB6P28072 239 aa8.07□□□□□ -1.12
CAPN3-202ENST00000337571 SDC2P34741 201 aa8.07□□□□□ -1.12
CAPN3-202ENST00000337571 ARL3P36405 182 aa8.07□□□□□ -1.12
CAPN3-202ENST00000337571 RPL8P62917 257 aaKnown RBP8.07□□□□□ -1.12
CAPN3-202ENST00000337571 KCTD21Q4G0X4 260 aa8.07□□□□□ -1.12
CAPN3-202ENST00000337571 IDNKQ5T6J7 187 aa8.07□□□□□ -1.12
CAPN3-202ENST00000337571 CLEC19AQ6UXS0 136 aa8.07□□□□□ -1.12
CAPN3-202ENST00000337571 SLC16A13Q7RTY0 426 aa8.07□□□□□ -1.12
CAPN3-202ENST00000337571 GPHB5Q86YW7 130 aa8.07□□□□□ -1.12
CAPN3-202ENST00000337571 SPAG16Q8N0X2 631 aa8.07□□□□□ -1.12
CAPN3-202ENST00000337571 ZBTB34Q8NCN2 500 aa8.07□□□□□ -1.12
CAPN3-202ENST00000337571 OR13F1Q8NGS4 319 aa8.07□□□□□ -1.12
CAPN3-202ENST00000337571 OR4A5Q8NH83 315 aa8.07□□□□□ -1.12
CAPN3-202ENST00000337571 THAP7Q9BT49 309 aaPredicted RBP8.07□□□□□ -1.12
CAPN3-202ENST00000337571 CCL28Q9NRJ3 127 aa8.07□□□□□ -1.12
CAPN3-202ENST00000337571 THYN1Q9P016 225 aa8.07□□□□□ -1.12
CAPN3-202ENST00000337571 A0A0A6YYH2 397 aa8.06□□□□□ -1.12
CAPN3-202ENST00000337571 TRBV7-1A0A0A6YYK4 115 aa8.06□□□□□ -1.12
CAPN3-202ENST00000337571 LCE6AA0A183 80 aa8.06□□□□□ -1.12
CAPN3-202ENST00000337571 A6NJ64 397 aa8.06□□□□□ -1.12
CAPN3-202ENST00000337571 C2orf70A6NJV1 201 aa8.06□□□□□ -1.12
CAPN3-202ENST00000337571 ZNF785A8K8V0 405 aa8.06□□□□□ -1.12
CAPN3-202ENST00000337571 OR11H12B2RN74 326 aa8.06□□□□□ -1.12
CAPN3-202ENST00000337571 TEX22C9J3V5 150 aa8.06□□□□□ -1.12
CAPN3-202ENST00000337571 NDUFB8O95169 186 aa8.06□□□□□ -1.12
CAPN3-202ENST00000337571 IGHV3-23P01764 117 aa8.06□□□□□ -1.12
CAPN3-202ENST00000337571 HLA-AP01891 365 aaKnown RBP8.06□□□□□ -1.12
CAPN3-202ENST00000337571 CRYGCP07315 174 aa8.06□□□□□ -1.12
CAPN3-202ENST00000337571 IL6RP08887 468 aaPredicted RBP8.06□□□□□ -1.12
CAPN3-202ENST00000337571 ZNF735P0CB33 412 aa8.06□□□□□ -1.12
CAPN3-202ENST00000337571 CBLN1P23435 193 aa8.06□□□□□ -1.12
CAPN3-202ENST00000337571 ALDH3B2P48448 385 aa8.06□□□□□ -1.12
CAPN3-202ENST00000337571 CATR1Q13166 79 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms