RNA–Protein interactions for RNA: ENST00000336233.9

LIPA-202, Transcript of lipase A, lysosomal acid type, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIPA, Length 2,782 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIPA-202ENST00000336233 CDC34P49427 236 aaPredicted RBP11.78□□□□□ -0.52
LIPA-202ENST00000336233 ZNF134P52741 427 aa11.78□□□□□ -0.52
LIPA-202ENST00000336233 C17orf58Q2M2W7 97 aa11.78□□□□□ -0.52
LIPA-202ENST00000336233 RPL39P5Q59GN2 51 aa11.78□□□□□ -0.52
LIPA-202ENST00000336233 ITLN1Q8WWA0 313 aa11.78□□□□□ -0.52
LIPA-202ENST00000336233 SFXN3Q9BWM7 321 aa11.78□□□□□ -0.52
LIPA-202ENST00000336233 CHTOPQ9Y3Y2 248 aaKnown RBP11.78□□□□□ -0.52
LIPA-202ENST00000336233 ELOA3CA0A087WX78 387 aaPredicted RBP11.77□□□□□ -0.53
LIPA-202ENST00000336233 TRGC2P03986 189 aa11.77□□□□□ -0.53
LIPA-202ENST00000336233 NPSP0C0P6 89 aa11.77□□□□□ -0.53
LIPA-202ENST00000336233 RPL23P62829 140 aaKnown RBP11.77□□□□□ -0.53
LIPA-202ENST00000336233 TLE1Q04724 770 aa11.77□□□□□ -0.53
LIPA-202ENST00000336233 ZNRF1Q8ND25 227 aa11.77□□□□□ -0.53
LIPA-202ENST00000336233 S1PR3Q99500 378 aa11.77□□□□□ -0.53
LIPA-202ENST00000336233 PARLQ9H300 379 aa11.77□□□□□ -0.53
LIPA-202ENST00000336233 YIF1AO95070 293 aa11.77□□□□□ -0.53
LIPA-202ENST00000336233 OPRK1P41145 380 aa11.77□□□□□ -0.53
LIPA-202ENST00000336233 NDUFA6P56556 154 aa11.77□□□□□ -0.53
LIPA-202ENST00000336233 BSXQ3C1V8 233 aa11.77□□□□□ -0.53
LIPA-202ENST00000336233 TMEM30BQ3MIR4 351 aa11.77□□□□□ -0.53
LIPA-202ENST00000336233 OR4S2Q8NH73 311 aa11.77□□□□□ -0.53
LIPA-202ENST00000336233 NEIL1Q96FI4 390 aaPredicted RBP11.77□□□□□ -0.53
LIPA-202ENST00000336233 LINC00574Q9H8X3 128 aa11.77□□□□□ -0.53
LIPA-202ENST00000336233 EREGO14944 169 aa11.76□□□□□ -0.53
LIPA-202ENST00000336233 VENTXO95231 258 aa11.76□□□□□ -0.53
LIPA-202ENST00000336233 CEACAM8P31997 349 aaPredicted RBP11.76□□□□□ -0.53
LIPA-202ENST00000336233 RPS16P62249 146 aaKnown RBP11.76□□□□□ -0.53
LIPA-202ENST00000336233 STUMQ69YW2 141 aa11.76□□□□□ -0.53
LIPA-202ENST00000336233 TMEM140Q9NV12 185 aa11.76□□□□□ -0.53
LIPA-202ENST00000336233 OTOGLQ3ZCN5 2332 aa11.76□□□□□ -0.53
LIPA-202ENST00000336233 KBTBD11-OT1A0A1B0GTJ5 212 aa11.76□□□□□ -0.53
LIPA-202ENST00000336233 HMGB3O15347 200 aaKnown RBP11.76□□□□□ -0.53
LIPA-202ENST00000336233 GFRA3O60609 400 aa11.76□□□□□ -0.53
LIPA-202ENST00000336233 PFN1P07737 140 aaKnown RBP11.76□□□□□ -0.53
LIPA-202ENST00000336233 RTP5Q14D33 572 aa11.76□□□□□ -0.53
LIPA-202ENST00000336233 ADIRFQ15847 76 aa11.76□□□□□ -0.53
LIPA-202ENST00000336233 GATAD1Q8WUU5 269 aa11.76□□□□□ -0.53
LIPA-202ENST00000336233 RNF7Q9UBF6 113 aa11.76□□□□□ -0.53
LIPA-202ENST00000336233 SPRY3O43610 288 aa11.75□□□□□ -0.53
LIPA-202ENST00000336233 S100A2P29034 98 aa11.75□□□□□ -0.53
LIPA-202ENST00000336233 PLA2G5P39877 138 aa11.75□□□□□ -0.53
LIPA-202ENST00000336233 EDDM3BP56851 147 aa11.75□□□□□ -0.53
LIPA-202ENST00000336233 HNF4GQ14541 408 aa11.75□□□□□ -0.53
LIPA-202ENST00000336233 C16orf82Q7Z2V1 217 aa11.75□□□□□ -0.53
LIPA-202ENST00000336233 ZNF439Q8NDP4 499 aa11.75□□□□□ -0.53
LIPA-202ENST00000336233 OR4F5Q8NH21 305 aa11.75□□□□□ -0.53
LIPA-202ENST00000336233 RPUSD4Q96CM3 377 aaKnown RBP11.75□□□□□ -0.53
LIPA-202ENST00000336233 OR4F4Q96R69 305 aa11.75□□□□□ -0.53
LIPA-202ENST00000336233 FAM234AQ9H0X4 552 aa11.75□□□□□ -0.53
LIPA-202ENST00000336233 IL19Q9UHD0 177 aa11.75□□□□□ -0.53
LIPA-202ENST00000336233 PRR14LQ5THK1 2151 aa11.75□□□□□ -0.53
LIPA-202ENST00000336233 C15orf61A6NNL5 157 aa11.75□□□□□ -0.53
LIPA-202ENST00000336233 CRYABP02511 175 aaKnown RBP11.75□□□□□ -0.53
LIPA-202ENST00000336233 THBS3P49746 956 aa11.75□□□□□ -0.53
LIPA-202ENST00000336233 POU2AF1Q16633 256 aa11.75□□□□□ -0.53
LIPA-202ENST00000336233 CT45A1Q5HYN5 189 aa11.75□□□□□ -0.53
LIPA-202ENST00000336233 TGIF2LYQ8IUE0 185 aa11.75□□□□□ -0.53
LIPA-202ENST00000336233 RPRMLQ8N4K4 120 aa11.75□□□□□ -0.53
LIPA-202ENST00000336233 CT45A3Q8NHU0 189 aa11.75□□□□□ -0.53
LIPA-202ENST00000336233 ABHD5Q8WTS1 349 aa11.75□□□□□ -0.53
LIPA-202ENST00000336233 ADTRPQ96IZ2 230 aa11.75□□□□□ -0.53
LIPA-202ENST00000336233 TCF19Q9Y242 345 aa11.75□□□□□ -0.53
LIPA-202ENST00000336233 FOXA2Q9Y261 457 aaPredicted RBP11.75□□□□□ -0.53
LIPA-202ENST00000336233 PAGE4O60829 102 aa11.74□□□□□ -0.53
LIPA-202ENST00000336233 TREML4Q6UXN2 200 aa11.74□□□□□ -0.53
LIPA-202ENST00000336233 C1orf229Q6ZS94 237 aaPredicted RBP11.74□□□□□ -0.53
LIPA-202ENST00000336233 FRZBQ92765 325 aa11.74□□□□□ -0.53
LIPA-202ENST00000336233 ANAPC16Q96DE5 110 aa11.74□□□□□ -0.53
LIPA-202ENST00000336233 SRD5A3Q9H8P0 318 aa11.74□□□□□ -0.53
LIPA-202ENST00000336233 HEYLQ9NQ87 328 aaPredicted RBP11.74□□□□□ -0.53
LIPA-202ENST00000336233 RRHO14718 337 aa11.74□□□□□ -0.53
LIPA-202ENST00000336233 PDE6DO43924 150 aa11.74□□□□□ -0.53
LIPA-202ENST00000336233 TRGC1P0CF51 173 aa11.74□□□□□ -0.53
LIPA-202ENST00000336233 TCF23Q7RTU1 214 aa11.74□□□□□ -0.53
LIPA-202ENST00000336233 HIST3H2BBQ8N257 126 aa11.74□□□□□ -0.53
LIPA-202ENST00000336233 TMEM170AQ8WVE7 144 aa11.74□□□□□ -0.53
LIPA-202ENST00000336233 PLPPR2Q96GM1 343 aa11.74□□□□□ -0.53
LIPA-202ENST00000336233 GCM1Q9NP62 436 aa11.74□□□□□ -0.53
LIPA-202ENST00000336233 KCNIP2Q9NS61 270 aa11.74□□□□□ -0.53
LIPA-202ENST00000336233 GAR1Q9NY12 217 aaKnown RBP11.74□□□□□ -0.53
LIPA-202ENST00000336233 TRGV10A0A0A0MS01 117 aa11.73□□□□□ -0.53
LIPA-202ENST00000336233 TRAV3A0A0B4J244 114 aa11.73□□□□□ -0.53
LIPA-202ENST00000336233 DLEU1O43261 78 aa11.73□□□□□ -0.53
LIPA-202ENST00000336233 IGHV1-46P01743 117 aa11.73□□□□□ -0.53
LIPA-202ENST00000336233 OR10A7Q8NGE5 316 aa11.73□□□□□ -0.53
LIPA-202ENST00000336233 CORO2AQ92828 525 aa11.73□□□□□ -0.53
LIPA-202ENST00000336233 GAFA1Q96PS6 74 aa11.73□□□□□ -0.53
LIPA-202ENST00000336233 TXNDC17Q9BRA2 123 aa11.73□□□□□ -0.53
LIPA-202ENST00000336233 TMEM14BQ9NUH8 114 aa11.73□□□□□ -0.53
LIPA-202ENST00000336233 HCFC1P51610 2035 aa11.73□□□□□ -0.53
LIPA-202ENST00000336233 DSCAML1Q8TD84 2053 aa11.73□□□□□ -0.53
LIPA-202ENST00000336233 HEATR1Q9H583 2144 aaKnown RBP11.73□□□□□ -0.53
LIPA-202ENST00000336233 SAA2-SAA4A0A096LPE2 208 aa11.73□□□□□ -0.53
LIPA-202ENST00000336233 C11orf94C9JXX5 98 aa11.73□□□□□ -0.53
LIPA-202ENST00000336233 SAA2P0DJI9 122 aaPredicted RBP11.73□□□□□ -0.53
LIPA-202ENST00000336233 MRPS11P82912 194 aaKnown RBP11.73□□□□□ -0.53
LIPA-202ENST00000336233 TNFAIP6P98066 277 aaPredicted RBP11.73□□□□□ -0.53
LIPA-202ENST00000336233 VKORC1L1Q8N0U8 176 aa11.73□□□□□ -0.53
LIPA-202ENST00000336233 RBMXL3Q8N7X1 1067 aaKnown RBP11.73□□□□□ -0.53
LIPA-202ENST00000336233 NUP37Q8NFH4 326 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms