RNA–Protein interactions for RNA: ENST00000336219.3

CDCA4-201, Transcript of cell division cycle associated 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA4, Length 2,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4-201ENST00000336219 ZNF705AQ6ZN79 300 aaPredicted RBP16.53■□□□□ 0.24
CDCA4-201ENST00000336219 VKORC1L1Q8N0U8 176 aa16.53■□□□□ 0.24
CDCA4-201ENST00000336219 WDR83OSQ9Y284 106 aa16.53■□□□□ 0.24
CDCA4-201ENST00000336219 PRR14LQ5THK1 2151 aa16.52■□□□□ 0.24
CDCA4-201ENST00000336219 MDFIC2A0A1B0GVS7 189 aa16.52■□□□□ 0.24
CDCA4-201ENST00000336219 ZNF891A8MT65 544 aaPredicted RBP16.52■□□□□ 0.24
CDCA4-201ENST00000336219 MIC13Q5XKP0 118 aa16.52■□□□□ 0.24
CDCA4-201ENST00000336219 KCNIP2Q9NS61 270 aa16.52■□□□□ 0.24
CDCA4-201ENST00000336219 SLC17A3O00476 420 aa16.52■□□□□ 0.23
CDCA4-201ENST00000336219 LINC00310P59036 64 aa16.52■□□□□ 0.23
CDCA4-201ENST00000336219 FOXL1Q12952 345 aa16.52■□□□□ 0.23
CDCA4-201ENST00000336219 HLA-DRB5Q30154 266 aa16.52■□□□□ 0.23
CDCA4-201ENST00000336219 Q6ZWC4 215 aa16.52■□□□□ 0.23
CDCA4-201ENST00000336219 CNEP1R1Q8N9A8 125 aa16.52■□□□□ 0.23
CDCA4-201ENST00000336219 WDR31Q8NA23 367 aa16.52■□□□□ 0.23
CDCA4-201ENST00000336219 OCC1Q8TAD7 63 aa16.52■□□□□ 0.23
CDCA4-201ENST00000336219 CMTM2Q8TAZ6 248 aa16.52■□□□□ 0.23
CDCA4-201ENST00000336219 DIRC2Q96SL1 478 aa16.52■□□□□ 0.23
CDCA4-201ENST00000336219 F2Z2F3 143 aa16.51■□□□□ 0.23
CDCA4-201ENST00000336219 AQP7O14520 342 aa16.51■□□□□ 0.23
CDCA4-201ENST00000336219 TIMM8AO60220 97 aaPredicted RBP16.51■□□□□ 0.23
CDCA4-201ENST00000336219 IGHV3-13P01766 116 aa16.51■□□□□ 0.23
CDCA4-201ENST00000336219 IGHV3-7P01780 117 aa16.51■□□□□ 0.23
CDCA4-201ENST00000336219 ZNF25P17030 456 aaPredicted RBP16.51■□□□□ 0.23
CDCA4-201ENST00000336219 OR10J1P30954 320 aa16.51■□□□□ 0.23
CDCA4-201ENST00000336219 TOMM20LQ6UXN7 152 aa16.51■□□□□ 0.23
CDCA4-201ENST00000336219 HSD17B10Q99714 261 aaKnown RBP16.51■□□□□ 0.23
CDCA4-201ENST00000336219 IGHG3P01860 377 aa16.51■□□□□ 0.23
CDCA4-201ENST00000336219 CD99P14209 185 aa16.51■□□□□ 0.23
CDCA4-201ENST00000336219 RAB4AP20338 218 aa16.51■□□□□ 0.23
CDCA4-201ENST00000336219 HOXC12P31275 282 aa16.51■□□□□ 0.23
CDCA4-201ENST00000336219 MSL2Q9HCI7 577 aa16.51■□□□□ 0.23
CDCA4-201ENST00000336219 FZR1Q9UM11 496 aa16.51■□□□□ 0.23
CDCA4-201ENST00000336219 SPENQ96T58 3664 aaKnown RBP16.51■□□□□ 0.23
CDCA4-201ENST00000336219 ASPMQ8IZT6 3477 aa16.5■□□□□ 0.23
CDCA4-201ENST00000336219 KITLGP21583 273 aa16.5■□□□□ 0.23
CDCA4-201ENST00000336219 CDKN1AP38936 164 aa16.5■□□□□ 0.23
CDCA4-201ENST00000336219 SMIM21Q3B7S5 101 aa16.5■□□□□ 0.23
CDCA4-201ENST00000336219 ZCCHC14Q8WYQ9 949 aaKnown RBP16.5■□□□□ 0.23
CDCA4-201ENST00000336219 R3HDM4Q96D70 268 aa16.5■□□□□ 0.23
CDCA4-201ENST00000336219 YTHDF2Q9Y5A9 579 aaKnown RBP16.5■□□□□ 0.23
CDCA4-201ENST00000336219 HPRT1P00492 218 aa16.5■□□□□ 0.23
CDCA4-201ENST00000336219 TRIP6Q15654 476 aaKnown RBP16.5■□□□□ 0.23
CDCA4-201ENST00000336219 TREML4Q6UXN2 200 aa16.5■□□□□ 0.23
CDCA4-201ENST00000336219 SSMEM1Q8WWF3 244 aa16.5■□□□□ 0.23
CDCA4-201ENST00000336219 LOXL4Q96JB6 756 aa16.5■□□□□ 0.23
CDCA4-201ENST00000336219 MGST2Q99735 147 aa16.5■□□□□ 0.23
CDCA4-201ENST00000336219 DSPP15924 2871 aaKnown RBP16.49■□□□□ 0.23
CDCA4-201ENST00000336219 WISP2O76076 250 aa16.49■□□□□ 0.23
CDCA4-201ENST00000336219 KIR2DL2P43627 348 aaPredicted RBP16.49■□□□□ 0.23
CDCA4-201ENST00000336219 FABP6P51161 128 aa16.49■□□□□ 0.23
CDCA4-201ENST00000336219 VWA1Q6PCB0 445 aa16.49■□□□□ 0.23
CDCA4-201ENST00000336219 DEFB123Q8N688 67 aa16.49■□□□□ 0.23
CDCA4-201ENST00000336219 MS4A5Q9H3V2 200 aa16.49■□□□□ 0.23
CDCA4-201ENST00000336219 HCFC1P51610 2035 aa16.49■□□□□ 0.23
CDCA4-201ENST00000336219 ZFHX4Q86UP3 3567 aa16.49■□□□□ 0.23
CDCA4-201ENST00000336219 C15orf65H3BRN8 121 aa16.49■□□□□ 0.23
CDCA4-201ENST00000336219 K7EN84 100 aa16.49■□□□□ 0.23
CDCA4-201ENST00000336219 CECR9P0C854 216 aa16.49■□□□□ 0.23
CDCA4-201ENST00000336219 TIMP3P35625 211 aa16.49■□□□□ 0.23
CDCA4-201ENST00000336219 FOXF2Q12947 444 aa16.49■□□□□ 0.23
CDCA4-201ENST00000336219 SPATA31B1PQ5VZV4 182 aa16.49■□□□□ 0.23
CDCA4-201ENST00000336219 TRAV3A0A0B4J244 114 aa16.48■□□□□ 0.23
CDCA4-201ENST00000336219 FCGR3BO75015 233 aa16.48■□□□□ 0.23
CDCA4-201ENST00000336219 HTD2P86397 168 aa16.48■□□□□ 0.23
CDCA4-201ENST00000336219 ABHD12Q8N2K0 398 aa16.48■□□□□ 0.23
CDCA4-201ENST00000336219 C1orf162Q8NEQ5 155 aaPredicted RBP16.48■□□□□ 0.23
CDCA4-201ENST00000336219 Q8TCH9 128 aa16.48■□□□□ 0.23
CDCA4-201ENST00000336219 SPINT2O43291 252 aa16.48■□□□□ 0.23
CDCA4-201ENST00000336219 PROP1O75360 226 aa16.48■□□□□ 0.23
CDCA4-201ENST00000336219 SERF1AO75920 110 aa16.48■□□□□ 0.23
CDCA4-201ENST00000336219 ZNF90Q03938 601 aa16.48■□□□□ 0.23
CDCA4-201ENST00000336219 CD177Q8N6Q3 437 aa16.48■□□□□ 0.23
CDCA4-201ENST00000336219 OR10G8Q8NGN5 311 aa16.48■□□□□ 0.23
CDCA4-201ENST00000336219 TMEM68Q96MH6 324 aa16.48■□□□□ 0.23
CDCA4-201ENST00000336219 TMEM106BQ9NUM4 274 aa16.48■□□□□ 0.23
CDCA4-201ENST00000336219 YPEL1O60688 119 aa16.47■□□□□ 0.23
CDCA4-201ENST00000336219 ADH4P08319 380 aa16.47■□□□□ 0.23
CDCA4-201ENST00000336219 YPEL2Q96QA6 119 aa16.47■□□□□ 0.23
CDCA4-201ENST00000336219 PARD6AQ9NPB6 346 aa16.47■□□□□ 0.23
CDCA4-201ENST00000336219 PAM16Q9Y3D7 125 aa16.47■□□□□ 0.23
CDCA4-201ENST00000336219 PCNX2A6NKB5 2137 aa16.47■□□□□ 0.23
CDCA4-201ENST00000336219 FOXH1O75593 365 aa16.47■□□□□ 0.23
CDCA4-201ENST00000336219 IRF2P14316 349 aa16.47■□□□□ 0.23
CDCA4-201ENST00000336219 YPEL3P61236 119 aaPredicted RBP16.47■□□□□ 0.23
CDCA4-201ENST00000336219 EDDM3AQ14507 147 aa16.47■□□□□ 0.23
CDCA4-201ENST00000336219 ZNF718Q3SXZ3 478 aa16.47■□□□□ 0.23
CDCA4-201ENST00000336219 TRAT1Q6PIZ9 186 aa16.47■□□□□ 0.23
CDCA4-201ENST00000336219 C9orf106Q8NAJ2 232 aa16.47■□□□□ 0.23
CDCA4-201ENST00000336219 RAB1CQ92928 201 aa16.47■□□□□ 0.23
CDCA4-201ENST00000336219 HSPB9Q9BQS6 159 aa16.47■□□□□ 0.23
CDCA4-201ENST00000336219 GGTLC1Q9BX51 225 aa16.47■□□□□ 0.23
CDCA4-201ENST00000336219 TUBG2Q9NRH3 451 aa16.47■□□□□ 0.23
CDCA4-201ENST00000336219 LOC400499M0QZD8 3231 aa16.46■□□□□ 0.23
CDCA4-201ENST00000336219 TET2Q6N021 2002 aaPredicted RBP16.46■□□□□ 0.23
CDCA4-201ENST00000336219 DUTP33316 252 aaKnown RBP16.46■□□□□ 0.23
CDCA4-201ENST00000336219 PDLIM3Q53GG5 364 aaPredicted RBP16.46■□□□□ 0.23
CDCA4-201ENST00000336219 TPTE2P1Q5T6R2 138 aa16.46■□□□□ 0.23
CDCA4-201ENST00000336219 LRRC29Q8WV35 223 aa16.46■□□□□ 0.23
CDCA4-201ENST00000336219 MRPL18Q9H0U6 180 aaKnown RBP16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms