RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 LY6EQ16553 131 aa17.15■□□□□ 0.34
TPM1-204ENST00000334895 TMEM219Q86XT9 240 aa17.15■□□□□ 0.34
TPM1-204ENST00000334895 FAM219AQ8IW50 185 aa17.15■□□□□ 0.34
TPM1-204ENST00000334895 BET1LQ9NYM9 111 aa17.15■□□□□ 0.34
TPM1-204ENST00000334895 CACNG5Q9UF02 275 aa17.15■□□□□ 0.34
TPM1-204ENST00000334895 NSG2Q9Y328 171 aa17.15■□□□□ 0.34
TPM1-204ENST00000334895 NIPBLQ6KC79 2804 aaeCLIP17.15■□□□□ 0.34
TPM1-204ENST00000334895 C13orf42A0A1B0GVH6 325 aa17.14■□□□□ 0.33
TPM1-204ENST00000334895 OR2A4O95047 310 aa17.14■□□□□ 0.33
TPM1-204ENST00000334895 SPDEFO95238 335 aa17.14■□□□□ 0.33
TPM1-204ENST00000334895 TRAPPC2P0DI81 140 aa17.14■□□□□ 0.33
TPM1-204ENST00000334895 TRAPPC2BP0DI82 140 aa17.14■□□□□ 0.33
TPM1-204ENST00000334895 RELBQ01201 579 aa17.14■□□□□ 0.33
TPM1-204ENST00000334895 VMA21Q3ZAQ7 101 aa17.14■□□□□ 0.33
TPM1-204ENST00000334895 OR2A7Q96R45 310 aa17.14■□□□□ 0.33
TPM1-204ENST00000334895 AIFM2Q9BRQ8 373 aa17.14■□□□□ 0.33
TPM1-204ENST00000334895 FBXL15Q9H469 300 aa17.14■□□□□ 0.33
TPM1-204ENST00000334895 C5orf51A6NDU8 294 aa17.14■□□□□ 0.33
TPM1-204ENST00000334895 UPK2O00526 184 aa17.14■□□□□ 0.33
TPM1-204ENST00000334895 RRHO14718 337 aa17.14■□□□□ 0.33
TPM1-204ENST00000334895 CRLF1O75462 422 aa17.14■□□□□ 0.33
TPM1-204ENST00000334895 KBTBD11O94819 623 aa17.14■□□□□ 0.33
TPM1-204ENST00000334895 SRD5A1P18405 259 aa17.14■□□□□ 0.33
TPM1-204ENST00000334895 IAH1Q2TAA2 248 aaPredicted RBP17.14■□□□□ 0.33
TPM1-204ENST00000334895 GSG1LQ6UXU4 331 aa17.14■□□□□ 0.33
TPM1-204ENST00000334895 TEX45Q8NA69 505 aa17.14■□□□□ 0.33
TPM1-204ENST00000334895 RBM14Q96PK6 669 aaKnown RBP17.14■□□□□ 0.33
TPM1-204ENST00000334895 METTL1Q9UBP6 276 aaKnown RBP17.14■□□□□ 0.33
TPM1-204ENST00000334895 SIGLEC9Q9Y336 463 aa17.14■□□□□ 0.33
TPM1-204ENST00000334895 NF1P21359 2839 aa17.13■□□□□ 0.33
TPM1-204ENST00000334895 HOXA3O43365 443 aaPredicted RBP17.13■□□□□ 0.33
TPM1-204ENST00000334895 PITX3O75364 302 aa17.13■□□□□ 0.33
TPM1-204ENST00000334895 PJVKQ0ZLH3 352 aa17.13■□□□□ 0.33
TPM1-204ENST00000334895 FAM71E2Q8N5Q1 922 aa17.13■□□□□ 0.33
TPM1-204ENST00000334895 TMEM167AQ8TBQ9 72 aa17.13■□□□□ 0.33
TPM1-204ENST00000334895 PLXNB1O43157 2135 aa17.13■□□□□ 0.33
TPM1-204ENST00000334895 CUBNO60494 3623 aa17.12■□□□□ 0.33
TPM1-204ENST00000334895 A0A1B0GU03 582 aa17.12■□□□□ 0.33
TPM1-204ENST00000334895 CHST1O43916 411 aa17.12■□□□□ 0.33
TPM1-204ENST00000334895 OR2F2O95006 317 aa17.12■□□□□ 0.33
TPM1-204ENST00000334895 SLC25A6P12236 298 aa17.12■□□□□ 0.33
TPM1-204ENST00000334895 OR2B8PP59922 312 aa17.12■□□□□ 0.33
TPM1-204ENST00000334895 SRSF4Q08170 494 aaKnown RBP17.12■□□□□ 0.33
TPM1-204ENST00000334895 IL15RAQ13261 267 aa17.12■□□□□ 0.33
TPM1-204ENST00000334895 SMCO1Q147U7 214 aa17.12■□□□□ 0.33
TPM1-204ENST00000334895 Q8N9W7 124 aa17.12■□□□□ 0.33
TPM1-204ENST00000334895 ZBTB8BQ8NAP8 495 aaPredicted RBP17.12■□□□□ 0.33
TPM1-204ENST00000334895 OR8H1Q8NGG4 311 aa17.12■□□□□ 0.33
TPM1-204ENST00000334895 VSTM2AQ8TAG5 236 aa17.12■□□□□ 0.33
TPM1-204ENST00000334895 SSMEM1Q8WWF3 244 aa17.12■□□□□ 0.33
TPM1-204ENST00000334895 C2orf50Q96LR7 162 aa17.12■□□□□ 0.33
TPM1-204ENST00000334895 SLC25A33Q9BSK2 321 aa17.12■□□□□ 0.33
TPM1-204ENST00000334895 CHIAQ9BZP6 476 aa17.12■□□□□ 0.33
TPM1-204ENST00000334895 ZNF436Q9C0F3 470 aaPredicted RBP17.12■□□□□ 0.33
TPM1-204ENST00000334895 RANBP3Q9H6Z4 567 aaPredicted RBP17.12■□□□□ 0.33
TPM1-204ENST00000334895 TET2Q6N021 2002 aaPredicted RBP17.12■□□□□ 0.33
TPM1-204ENST00000334895 NCBP2LA6PVI3 153 aaKnown RBP17.11■□□□□ 0.33
TPM1-204ENST00000334895 MYOD1P15172 320 aa17.11■□□□□ 0.33
TPM1-204ENST00000334895 C5orf64Q2M2E5 130 aa17.11■□□□□ 0.33
TPM1-204ENST00000334895 OR4D5Q8NGN0 318 aa17.11■□□□□ 0.33
TPM1-204ENST00000334895 OR5R1Q8NH85 324 aa17.11■□□□□ 0.33
TPM1-204ENST00000334895 SPIN2AQ99865 258 aa17.11■□□□□ 0.33
TPM1-204ENST00000334895 SPIN2BQ9BPZ2 258 aa17.11■□□□□ 0.33
TPM1-204ENST00000334895 ZNF430Q9H8G1 570 aaPredicted RBP17.11■□□□□ 0.33
TPM1-204ENST00000334895 COA4Q9NYJ1 87 aa17.11■□□□□ 0.33
TPM1-204ENST00000334895 FCN1O00602 326 aa17.1■□□□□ 0.33
TPM1-204ENST00000334895 SSBP2P81877 361 aaPredicted RBP17.1■□□□□ 0.33
TPM1-204ENST00000334895 CD83Q01151 205 aa17.1■□□□□ 0.33
TPM1-204ENST00000334895 OR4A5Q8NH83 315 aa17.1■□□□□ 0.33
TPM1-204ENST00000334895 TNFRSF19Q9NS68 423 aa17.1■□□□□ 0.33
TPM1-204ENST00000334895 KIAA1456Q9P272 454 aa17.1■□□□□ 0.33
TPM1-204ENST00000334895 C15orf61A6NNL5 157 aa17.1■□□□□ 0.33
TPM1-204ENST00000334895 AMY1AP04745 511 aa17.1■□□□□ 0.33
TPM1-204ENST00000334895 PRSS8Q16651 343 aa17.1■□□□□ 0.33
TPM1-204ENST00000334895 AARDQ4LEZ3 155 aa17.1■□□□□ 0.33
TPM1-204ENST00000334895 THOC7Q6I9Y2 204 aaKnown RBP17.1■□□□□ 0.33
TPM1-204ENST00000334895 PPP1R27Q86WC6 154 aa17.1■□□□□ 0.33
TPM1-204ENST00000334895 FOXRED2Q8IWF2 684 aa17.1■□□□□ 0.33
TPM1-204ENST00000334895 ST6GAL2Q96JF0 529 aa17.1■□□□□ 0.33
TPM1-204ENST00000334895 PDCD10Q9BUL8 212 aa17.1■□□□□ 0.33
TPM1-204ENST00000334895 QTRT1Q9BXR0 403 aaKnown RBP17.1■□□□□ 0.33
TPM1-204ENST00000334895 TMEM14BQ9NUH8 114 aa17.1■□□□□ 0.33
TPM1-204ENST00000334895 C1RLQ9NZP8 487 aa17.1■□□□□ 0.33
TPM1-204ENST00000334895 GSKIPQ9P0R6 139 aa17.1■□□□□ 0.33
TPM1-204ENST00000334895 VPREB3Q9UKI3 123 aa17.1■□□□□ 0.33
TPM1-204ENST00000334895 MOB4Q9Y3A3 225 aa17.1■□□□□ 0.33
TPM1-204ENST00000334895 C2CD3Q4AC94 2353 aa17.09■□□□□ 0.33
TPM1-204ENST00000334895 NXPH3O95157 252 aa17.09■□□□□ 0.33
TPM1-204ENST00000334895 RPL8P62917 257 aaKnown RBP17.09■□□□□ 0.33
TPM1-204ENST00000334895 CXorf66Q5JRM2 361 aaPredicted RBP17.09■□□□□ 0.33
TPM1-204ENST00000334895 C5orf56Q8N8D9 126 aa17.09■□□□□ 0.33
TPM1-204ENST00000334895 OR4A16Q8NH70 328 aa17.09■□□□□ 0.33
TPM1-204ENST00000334895 OR1S1Q8NH92 325 aa17.09■□□□□ 0.33
TPM1-204ENST00000334895 CLCC1Q96S66 551 aa17.09■□□□□ 0.33
TPM1-204ENST00000334895 NMES1Q9C002 83 aa17.09■□□□□ 0.33
TPM1-204ENST00000334895 CTNNBIP1Q9NSA3 81 aaPredicted RBP17.09■□□□□ 0.33
TPM1-204ENST00000334895 PITPNC1Q9UKF7 332 aa17.09■□□□□ 0.33
TPM1-204ENST00000334895 SNAPC5O75971 98 aa17.08■□□□□ 0.32
TPM1-204ENST00000334895 GIPP09681 153 aaPredicted RBP17.08■□□□□ 0.32
TPM1-204ENST00000334895 CD300CQ08708 224 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms