RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 AARDQ4LEZ3 155 aa9.94□□□□□ -0.82
HDAC6-201ENST00000334136 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.94□□□□□ -0.82
HDAC6-201ENST00000334136 TCTEX1D1Q8N7M0 179 aa9.94□□□□□ -0.82
HDAC6-201ENST00000334136 TAF15Q92804 592 aaKnown RBP eCLIP9.94□□□□□ -0.825e-10■□□□□ 10.5
HDAC6-201ENST00000334136 HIST1H2BHQ93079 126 aa9.94□□□□□ -0.82
HDAC6-201ENST00000334136 HIST1H2BNQ99877 126 aa9.94□□□□□ -0.82
HDAC6-201ENST00000334136 HIST1H2BMQ99879 126 aa9.94□□□□□ -0.82
HDAC6-201ENST00000334136 CRIM1Q9NZV1 1036 aa9.94□□□□□ -0.82
HDAC6-201ENST00000334136 MED12LQ86YW9 2145 aa9.94□□□□□ -0.82
HDAC6-201ENST00000334136 IGHV3OR15-7A0A075B7D8 119 aa9.93□□□□□ -0.82
HDAC6-201ENST00000334136 DPRXA6NFQ7 191 aa9.93□□□□□ -0.82
HDAC6-201ENST00000334136 SYNGR1O43759 233 aa9.93□□□□□ -0.82
HDAC6-201ENST00000334136 ATP6V1FQ16864 119 aa9.93□□□□□ -0.82
HDAC6-201ENST00000334136 FOXL2NBQ6ZUU3 175 aa9.93□□□□□ -0.82
HDAC6-201ENST00000334136 MOB1BQ7L9L4 216 aa9.93□□□□□ -0.82
HDAC6-201ENST00000334136 RAB24Q969Q5 203 aa9.93□□□□□ -0.82
HDAC6-201ENST00000334136 HSD17B10Q99714 261 aaKnown RBP9.93□□□□□ -0.82
HDAC6-201ENST00000334136 MRPL37Q9BZE1 423 aaKnown RBP9.93□□□□□ -0.82
HDAC6-201ENST00000334136 NAGKQ9UJ70 344 aa9.93□□□□□ -0.82
HDAC6-201ENST00000334136 DOPEY2Q9Y3R5 2298 aa9.93□□□□□ -0.82
HDAC6-201ENST00000334136 PTPRBP23467 1997 aa9.93□□□□□ -0.82
HDAC6-201ENST00000334136 FAM157CP0CG43 387 aa9.93□□□□□ -0.82
HDAC6-201ENST00000334136 WNT5AP41221 380 aa9.93□□□□□ -0.82
HDAC6-201ENST00000334136 OR1L6Q8NGR2 347 aa9.93□□□□□ -0.82
HDAC6-201ENST00000334136 RCC1LQ96I51 464 aaKnown RBP9.93□□□□□ -0.82
HDAC6-201ENST00000334136 PARLQ9H300 379 aa9.93□□□□□ -0.82
HDAC6-201ENST00000334136 GNG10P50151 68 aa9.93□□□□□ -0.82
HDAC6-201ENST00000334136 PSG5Q15238 335 aa9.93□□□□□ -0.82
HDAC6-201ENST00000334136 SP5Q6BEB4 398 aaPredicted RBP9.93□□□□□ -0.82
HDAC6-201ENST00000334136 LYG1Q8N1E2 194 aa9.93□□□□□ -0.82
HDAC6-201ENST00000334136 OR8B3Q8NGG8 313 aa9.93□□□□□ -0.82
HDAC6-201ENST00000334136 OR8B2Q96RD0 313 aa9.93□□□□□ -0.82
HDAC6-201ENST00000334136 PRRC2CQ9Y520 2896 aaKnown RBP9.93□□□□□ -0.82
HDAC6-201ENST00000334136 NDUFA2O43678 99 aa9.93□□□□□ -0.82
HDAC6-201ENST00000334136 HAND1O96004 215 aa9.93□□□□□ -0.82
HDAC6-201ENST00000334136 HIST1H1BP16401 226 aaKnown RBP9.93□□□□□ -0.82
HDAC6-201ENST00000334136 RHOBP62745 196 aa9.93□□□□□ -0.82
HDAC6-201ENST00000334136 KIAA1644Q3SXP7 199 aa9.93□□□□□ -0.82
HDAC6-201ENST00000334136 PYY3Q5JQD4 70 aa9.93□□□□□ -0.82
HDAC6-201ENST00000334136 ZNF324BQ6AW86 544 aaPredicted RBP9.93□□□□□ -0.82
HDAC6-201ENST00000334136 IGHV1-69-2A0A0G2JMI3 117 aa9.92□□□□□ -0.82
HDAC6-201ENST00000334136 GNB2P62879 340 aa9.92□□□□□ -0.82
HDAC6-201ENST00000334136 RPEL1Q2QD12 228 aa9.92□□□□□ -0.82
HDAC6-201ENST00000334136 TUBA4BQ9H853 241 aa9.92□□□□□ -0.82
HDAC6-201ENST00000334136 OR1A1Q9P1Q5 309 aa9.92□□□□□ -0.82
HDAC6-201ENST00000334136 DIRC3C9JPN6 131 aa9.92□□□□□ -0.82
HDAC6-201ENST00000334136 GCGP01275 180 aa9.92□□□□□ -0.82
HDAC6-201ENST00000334136 AESQ08117 197 aa9.92□□□□□ -0.82
HDAC6-201ENST00000334136 ZCCHC24Q8N2G6 241 aaKnown RBP9.92□□□□□ -0.82
HDAC6-201ENST00000334136 R3HDM4Q96D70 268 aa9.92□□□□□ -0.82
HDAC6-201ENST00000334136 NUDT16L1Q9BRJ7 211 aaKnown RBP9.92□□□□□ -0.82
HDAC6-201ENST00000334136 WFDC1Q9HC57 220 aa9.92□□□□□ -0.82
HDAC6-201ENST00000334136 BET1LQ9NYM9 111 aa9.92□□□□□ -0.82
HDAC6-201ENST00000334136 RNF24Q9Y225 148 aa9.92□□□□□ -0.82
HDAC6-201ENST00000334136 HIVEP3Q5T1R4 2406 aa9.92□□□□□ -0.82
HDAC6-201ENST00000334136 C17orf100A8MU93 164 aa9.92□□□□□ -0.82
HDAC6-201ENST00000334136 IFNL4K9M1U5 179 aa9.92□□□□□ -0.82
HDAC6-201ENST00000334136 COX7A2P2O60397 106 aa9.92□□□□□ -0.82
HDAC6-201ENST00000334136 IGKV3-15P01624 115 aa9.92□□□□□ -0.82
HDAC6-201ENST00000334136 IL3RAP26951 378 aa9.92□□□□□ -0.82
HDAC6-201ENST00000334136 TRAT1Q6PIZ9 186 aa9.92□□□□□ -0.82
HDAC6-201ENST00000334136 FGFRL1Q8N441 504 aa9.92□□□□□ -0.82
HDAC6-201ENST00000334136 IQCF6A8MYZ5 107 aa9.91□□□□□ -0.82
HDAC6-201ENST00000334136 H0Y980 276 aa9.91□□□□□ -0.82
HDAC6-201ENST00000334136 CSN3P07498 182 aa9.91□□□□□ -0.82
HDAC6-201ENST00000334136 CT45A6P0DMU7 189 aa9.91□□□□□ -0.82
HDAC6-201ENST00000334136 CT45A5P0DMU8 189 aa9.91□□□□□ -0.82
HDAC6-201ENST00000334136 CT45A7P0DMV0 189 aa9.91□□□□□ -0.82
HDAC6-201ENST00000334136 CDKN1AP38936 164 aa9.91□□□□□ -0.82
HDAC6-201ENST00000334136 COL10A1Q03692 680 aa9.91□□□□□ -0.82
HDAC6-201ENST00000334136 CT45A1Q5HYN5 189 aa9.91□□□□□ -0.82
HDAC6-201ENST00000334136 SEM1Q6ZVN7 128 aa9.91□□□□□ -0.82
HDAC6-201ENST00000334136 C11orf42Q8N5U0 333 aa9.91□□□□□ -0.82
HDAC6-201ENST00000334136 CT45A3Q8NHU0 189 aa9.91□□□□□ -0.82
HDAC6-201ENST00000334136 GALNT14Q96FL9 552 aa9.91□□□□□ -0.82
HDAC6-201ENST00000334136 WDR61Q9GZS3 305 aaKnown RBP9.91□□□□□ -0.82
HDAC6-201ENST00000334136 WIPI2Q9Y4P8 454 aa9.91□□□□□ -0.82
HDAC6-201ENST00000334136 NOTCH3Q9UM47 2321 aa9.91□□□□□ -0.82
HDAC6-201ENST00000334136 SERTM2A0A1B0GWG4 89 aa9.91□□□□□ -0.82
HDAC6-201ENST00000334136 hADV38S2A0JD32 116 aa9.91□□□□□ -0.82
HDAC6-201ENST00000334136 DBX1A6NMT0 343 aa9.91□□□□□ -0.82
HDAC6-201ENST00000334136 M0QZK8 103 aa9.91□□□□□ -0.82
HDAC6-201ENST00000334136 GGCTO75223 188 aaKnown RBP9.91□□□□□ -0.82
HDAC6-201ENST00000334136 CXCL1P09341 107 aa9.91□□□□□ -0.82
HDAC6-201ENST00000334136 PCP4P48539 62 aa9.91□□□□□ -0.82
HDAC6-201ENST00000334136 ZNF506Q5JVG8 444 aa9.91□□□□□ -0.82
HDAC6-201ENST00000334136 FAM169BQ8N8A8 192 aa9.91□□□□□ -0.82
HDAC6-201ENST00000334136 OR5P3Q8WZ94 311 aa9.91□□□□□ -0.82
HDAC6-201ENST00000334136 ABHD14BQ96IU4 210 aa9.91□□□□□ -0.82
HDAC6-201ENST00000334136 PKIBQ9C010 78 aa9.91□□□□□ -0.82
HDAC6-201ENST00000334136 BARX1Q9HBU1 254 aaPredicted RBP9.91□□□□□ -0.82
HDAC6-201ENST00000334136 ONECUT1Q9UBC0 465 aa9.91□□□□□ -0.82
HDAC6-201ENST00000334136 ST8SIA5O15466 376 aa9.91□□□□□ -0.82
HDAC6-201ENST00000334136 AGAP20933 346 aa9.91□□□□□ -0.82
HDAC6-201ENST00000334136 FCER1GP30273 86 aa9.91□□□□□ -0.82
HDAC6-201ENST00000334136 PRDX2P32119 198 aa9.91□□□□□ -0.82
HDAC6-201ENST00000334136 ERHP84090 104 aaKnown RBP9.91□□□□□ -0.82
HDAC6-201ENST00000334136 Q56UQ5 140 aa9.91□□□□□ -0.82
HDAC6-201ENST00000334136 FAM166AQ6J272 317 aa9.91□□□□□ -0.82
HDAC6-201ENST00000334136 HEPN1Q6WQI6 88 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms