RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 PRAMEF5Q5TYX0 476 aa19.63■□□□□ 0.73
TSKU-201ENST00000333090 PRAMEF6Q5VXH4 476 aa19.63■□□□□ 0.73
TSKU-201ENST00000333090 VN1R17PQ8TDU5 208 aa19.63■□□□□ 0.73
TSKU-201ENST00000333090 TMEM208Q9BTX3 173 aa19.63■□□□□ 0.73
TSKU-201ENST00000333090 KMT2EQ8IZD2 1858 aa19.63■□□□□ 0.73
TSKU-201ENST00000333090 MPDU1O75352 247 aa19.62■□□□□ 0.73
TSKU-201ENST00000333090 RPL31P62899 125 aaKnown RBP19.62■□□□□ 0.73
TSKU-201ENST00000333090 FOXF2Q12947 444 aa19.62■□□□□ 0.73
TSKU-201ENST00000333090 BAGE3Q86Y29 109 aa19.62■□□□□ 0.73
TSKU-201ENST00000333090 BAGE2Q86Y30 109 aa19.62■□□□□ 0.73
TSKU-201ENST00000333090 VKORC1L1Q8N0U8 176 aa19.62■□□□□ 0.73
TSKU-201ENST00000333090 TXNDC17Q9BRA2 123 aa19.62■□□□□ 0.73
TSKU-201ENST00000333090 GGTLC1Q9BX51 225 aa19.62■□□□□ 0.73
TSKU-201ENST00000333090 HES4Q9HCC6 221 aa19.62■□□□□ 0.73
TSKU-201ENST00000333090 COL8A2P25067 703 aa19.62■□□□□ 0.73
TSKU-201ENST00000333090 METRNQ9UJH8 293 aa19.62■□□□□ 0.73
TSKU-201ENST00000333090 TMEM265A0A087WTH1 108 aa19.61■□□□□ 0.73
TSKU-201ENST00000333090 K7EN84 100 aa19.61■□□□□ 0.73
TSKU-201ENST00000333090 TNFSF13O75888 250 aa19.61■□□□□ 0.73
TSKU-201ENST00000333090 TEX43Q6ZNM6 134 aa19.61■□□□□ 0.73
TSKU-201ENST00000333090 OR4A16Q8NH70 328 aa19.61■□□□□ 0.73
TSKU-201ENST00000333090 MIEN1Q9BRT3 115 aa19.61■□□□□ 0.73
TSKU-201ENST00000333090 DCTN5Q9BTE1 182 aa19.61■□□□□ 0.73
TSKU-201ENST00000333090 SAMD10Q9BYL1 202 aa19.61■□□□□ 0.73
TSKU-201ENST00000333090 IL36BQ9NZH7 164 aa19.61■□□□□ 0.73
TSKU-201ENST00000333090 F2Z2F3 143 aa19.61■□□□□ 0.73
TSKU-201ENST00000333090 FCN1O00602 326 aa19.61■□□□□ 0.73
TSKU-201ENST00000333090 BATFQ16520 125 aa19.61■□□□□ 0.73
TSKU-201ENST00000333090 C20orf144Q9BQM9 153 aa19.61■□□□□ 0.73
TSKU-201ENST00000333090 HCFC1P51610 2035 aa19.61■□□□□ 0.73
TSKU-201ENST00000333090 CER1O95813 267 aa19.6■□□□□ 0.73
TSKU-201ENST00000333090 FRMD6-AS1P0C7T7 363 aa19.6■□□□□ 0.73
TSKU-201ENST00000333090 MPV17P39210 176 aa19.6■□□□□ 0.73
TSKU-201ENST00000333090 ABHD12Q8N2K0 398 aa19.6■□□□□ 0.73
TSKU-201ENST00000333090 OR5AU1Q8NGC0 362 aa19.6■□□□□ 0.73
TSKU-201ENST00000333090 IER3P46695 156 aa19.6■□□□□ 0.73
TSKU-201ENST00000333090 RPP30P78346 268 aaKnown RBP19.6■□□□□ 0.73
TSKU-201ENST00000333090 GABRA6Q16445 453 aa19.6■□□□□ 0.73
TSKU-201ENST00000333090 TMEM183BQ1AE95 376 aa19.6■□□□□ 0.73
TSKU-201ENST00000333090 C1orf210Q8IVY1 113 aa19.6■□□□□ 0.73
TSKU-201ENST00000333090 WDR31Q8NA23 367 aa19.6■□□□□ 0.73
TSKU-201ENST00000333090 OR1L6Q8NGR2 347 aa19.6■□□□□ 0.73
TSKU-201ENST00000333090 RANP62826 216 aaKnown RBP19.6■□□□□ 0.73
TSKU-201ENST00000333090 TGFBR3Q03167 851 aa19.6■□□□□ 0.73
TSKU-201ENST00000333090 KRTCAP3Q53RY4 240 aa19.6■□□□□ 0.73
TSKU-201ENST00000333090 VAMP8Q9BV40 100 aa19.6■□□□□ 0.73
TSKU-201ENST00000333090 MED13Q9UHV7 2174 aa19.59■□□□□ 0.73
TSKU-201ENST00000333090 IQCF6A8MYZ5 107 aa19.59■□□□□ 0.73
TSKU-201ENST00000333090 DLEU1O43261 78 aa19.59■□□□□ 0.73
TSKU-201ENST00000333090 ABI3Q9P2A4 366 aa19.59■□□□□ 0.73
TSKU-201ENST00000333090 GOLT1BQ9Y3E0 138 aa19.59■□□□□ 0.73
TSKU-201ENST00000333090 GPR12P47775 334 aa19.59■□□□□ 0.73
TSKU-201ENST00000333090 ZNF718Q3SXZ3 478 aa19.59■□□□□ 0.73
TSKU-201ENST00000333090 SPATA31B1PQ5VZV4 182 aa19.59■□□□□ 0.73
TSKU-201ENST00000333090 MSL2Q9HCI7 577 aa19.59■□□□□ 0.73
TSKU-201ENST00000333090 SEPSECSQ9HD40 501 aaKnown RBP19.59■□□□□ 0.73
TSKU-201ENST00000333090 J3QW42 95 aa19.58■□□□□ 0.73
TSKU-201ENST00000333090 GCHFRP30047 84 aa19.58■□□□□ 0.73
TSKU-201ENST00000333090 DUTP33316 252 aaKnown RBP19.58■□□□□ 0.73
TSKU-201ENST00000333090 EDDM3AQ14507 147 aa19.58■□□□□ 0.73
TSKU-201ENST00000333090 ACP7Q6ZNF0 438 aa19.58■□□□□ 0.73
TSKU-201ENST00000333090 C11orf53Q8IXP5 236 aa19.58■□□□□ 0.73
TSKU-201ENST00000333090 PRR14LQ5THK1 2151 aa19.58■□□□□ 0.73
TSKU-201ENST00000333090 SNURFLB1AK76 121 aa19.58■□□□□ 0.72
TSKU-201ENST00000333090 PROP1O75360 226 aa19.58■□□□□ 0.72
TSKU-201ENST00000333090 NPSP0C0P6 89 aa19.58■□□□□ 0.72
TSKU-201ENST00000333090 TNFSF10P50591 281 aa19.58■□□□□ 0.72
TSKU-201ENST00000333090 KLF14Q8TD94 323 aaPredicted RBP19.58■□□□□ 0.72
TSKU-201ENST00000333090 DEFB127Q9H1M4 99 aa19.58■□□□□ 0.72
TSKU-201ENST00000333090 CHODLQ9H9P2 273 aa19.58■□□□□ 0.72
TSKU-201ENST00000333090 FOXJ2Q9P0K8 574 aa19.58■□□□□ 0.72
TSKU-201ENST00000333090 MEOX1P50221 254 aa19.57■□□□□ 0.72
TSKU-201ENST00000333090 Q8TCH9 128 aa19.57■□□□□ 0.72
TSKU-201ENST00000333090 A0A1W2PNU3 283 aaPredicted RBP19.57■□□□□ 0.72
TSKU-201ENST00000333090 WISP2O76076 250 aa19.57■□□□□ 0.72
TSKU-201ENST00000333090 IGHV3-13P01766 116 aa19.57■□□□□ 0.72
TSKU-201ENST00000333090 IGHV3-7P01780 117 aa19.57■□□□□ 0.72
TSKU-201ENST00000333090 ESDP10768 282 aa19.57■□□□□ 0.72
TSKU-201ENST00000333090 FAM103A1Q9BTL3 118 aaKnown RBP19.57■□□□□ 0.72
TSKU-201ENST00000333090 TRAV3A0A0B4J244 114 aa19.56■□□□□ 0.72
TSKU-201ENST00000333090 A8MXE2 369 aa19.56■□□□□ 0.72
TSKU-201ENST00000333090 SPINT2O43291 252 aa19.56■□□□□ 0.72
TSKU-201ENST00000333090 GFRA3O60609 400 aa19.56■□□□□ 0.72
TSKU-201ENST00000333090 LYZL6O75951 148 aa19.56■□□□□ 0.72
TSKU-201ENST00000333090 LRFN3Q9BTN0 628 aa19.56■□□□□ 0.72
TSKU-201ENST00000333090 ARRDC1-AS1Q9H2J1 176 aa19.56■□□□□ 0.72
TSKU-201ENST00000333090 PRSS46E5RG02 174 aa19.56■□□□□ 0.72
TSKU-201ENST00000333090 VDAC2P45880 294 aaPredicted RBP19.56■□□□□ 0.72
TSKU-201ENST00000333090 LGALS4P56470 323 aa19.56■□□□□ 0.72
TSKU-201ENST00000333090 OR5I1Q13606 314 aa19.56■□□□□ 0.72
TSKU-201ENST00000333090 MMD2Q8IY49 270 aa19.56■□□□□ 0.72
TSKU-201ENST00000333090 GMPPAQ96IJ6 420 aaPredicted RBP19.56■□□□□ 0.72
TSKU-201ENST00000333090 FOXH1O75593 365 aa19.55■□□□□ 0.72
TSKU-201ENST00000333090 IL6RP08887 468 aaPredicted RBP19.55■□□□□ 0.72
TSKU-201ENST00000333090 EFNB3Q15768 340 aa19.55■□□□□ 0.72
TSKU-201ENST00000333090 GNG12Q9UBI6 72 aa19.55■□□□□ 0.72
TSKU-201ENST00000333090 TRAV9-1A0A075B6T8 112 aa19.55■□□□□ 0.72
TSKU-201ENST00000333090 M0R1X1 148 aa19.55■□□□□ 0.72
TSKU-201ENST00000333090 SPINK4O60575 86 aa19.55■□□□□ 0.72
TSKU-201ENST00000333090 BRS3P32247 399 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms